RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 PIAS4Q8N2W9 510 aaPredicted RBP14.62□□□□□ -0.07
VPS13D-205ENST00000473099 FSIP1Q8NA03 581 aa14.62□□□□□ -0.07
VPS13D-205ENST00000473099 TANGO6Q9C0B7 1094 aa14.62□□□□□ -0.07
VPS13D-205ENST00000473099 GZF1Q9H116 711 aaPredicted RBP14.62□□□□□ -0.07
VPS13D-205ENST00000473099 EMILIN3Q9NT22 766 aa14.62□□□□□ -0.07
VPS13D-205ENST00000473099 CLEC11AQ9Y240 323 aa14.62□□□□□ -0.07
VPS13D-205ENST00000473099 MRPL11Q9Y3B7 192 aaKnown RBP14.62□□□□□ -0.07
VPS13D-205ENST00000473099 AFG3L2Q9Y4W6 797 aa14.62□□□□□ -0.07
VPS13D-205ENST00000473099 SRPRBQ9Y5M8 271 aaKnown RBP14.62□□□□□ -0.07
VPS13D-205ENST00000473099 MYPNQ86TC9 1320 aa14.62□□□□□ -0.07
VPS13D-205ENST00000473099 FAM205CA6NFA0 338 aa14.61□□□□□ -0.07
VPS13D-205ENST00000473099 CTAGE5O15320 804 aa14.61□□□□□ -0.07
VPS13D-205ENST00000473099 KINO60870 393 aaKnown RBP14.61□□□□□ -0.07
VPS13D-205ENST00000473099 MARCKSP29966 332 aaPredicted RBP14.61□□□□□ -0.07
VPS13D-205ENST00000473099 PPATQ06203 517 aa14.61□□□□□ -0.07
VPS13D-205ENST00000473099 TTLL12Q14166 644 aaPredicted RBP14.61□□□□□ -0.07
VPS13D-205ENST00000473099 ZSCAN23Q3MJ62 389 aa14.61□□□□□ -0.07
VPS13D-205ENST00000473099 AXDND1Q5T1B0 1012 aaPredicted RBP14.61□□□□□ -0.07
VPS13D-205ENST00000473099 ERO1BQ86YB8 467 aa14.61□□□□□ -0.07
VPS13D-205ENST00000473099 SAMD3Q8N6K7 520 aa14.61□□□□□ -0.07
VPS13D-205ENST00000473099 RASGRP4Q8TDF6 673 aa14.61□□□□□ -0.07
VPS13D-205ENST00000473099 RPAP3Q9H6T3 665 aaPredicted RBP14.61□□□□□ -0.07
VPS13D-205ENST00000473099 PPP1R9AQ9ULJ8 1098 aa14.61□□□□□ -0.07
VPS13D-205ENST00000473099 CTDP1Q9Y5B0 961 aaPredicted RBP14.61□□□□□ -0.07
VPS13D-205ENST00000473099 FAM237AA0A1B0GTK4 181 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 PIK3CDO00329 1044 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 ZBED4O75132 1171 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 FLOT1O75955 427 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 ICAM1P05362 532 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 GCFC2P16383 781 aaKnown RBP14.6□□□□□ -0.07
VPS13D-205ENST00000473099 LIG1P18858 919 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 ATP2B1P20020 1258 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 PRPHP41219 470 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 FKBP1BP68106 108 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 PRKG1Q13976 671 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 INF2Q27J81 1249 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 JAKMIP3Q5VZ66 844 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 LDHDQ86WU2 507 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 TBCKQ8TEA7 893 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 MAF1Q9H063 256 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 NUP62CLQ9H1M0 184 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 EHMT1Q9H9B1 1298 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 DACT1Q9NYF0 836 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 FAM13BQ9NYF5 915 aa14.6□□□□□ -0.07
VPS13D-205ENST00000473099 BIN2Q9UBW5 565 aaPredicted RBP14.6□□□□□ -0.07
VPS13D-205ENST00000473099 FBXO2Q9UK22 296 aaPredicted RBP14.6□□□□□ -0.07
VPS13D-205ENST00000473099 LOXHD1Q8IVV2 1947 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 SPDYE5A6NIY4 337 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 USP17L15C9J2P7 530 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 USP17L13C9JLJ4 530 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 USP17L11C9JVI0 530 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 USP17L18D6R9N7 530 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 USP17L22D6RA61 530 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 USP17L17D6RBQ6 530 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 USP17L19D6RCP7 530 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 USP17L20D6RJB6 530 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 CXCL11O14625 94 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 MCM7P33993 719 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 OAZ1P54368 228 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 HMGCS2P54868 508 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 USP17L24Q0WX57 530 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 PTGDRQ13258 359 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 PPIL2Q13356 520 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 ZNF174Q15697 407 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 USH1GQ495M9 461 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 RESP18Q5W5W9 173 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 PROCA1Q8NCQ7 364 aaPredicted RBP14.59□□□□□ -0.07
VPS13D-205ENST00000473099 PYM1Q9BRP8 204 aaKnown RBP14.59□□□□□ -0.07
VPS13D-205ENST00000473099 CLSTN2Q9H4D0 955 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 RRAGCQ9HB90 399 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 SLC38A10Q9HBR0 1119 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 FBXO28Q9NVF7 368 aa14.59□□□□□ -0.07
VPS13D-205ENST00000473099 MAP3K20Q9NYL2 800 aaKnown RBP14.59□□□□□ -0.07
VPS13D-205ENST00000473099 SPDYE3A6NKU9 549 aa14.58□□□□□ -0.08
VPS13D-205ENST00000473099 NR1I2O75469 434 aa14.58□□□□□ -0.08
VPS13D-205ENST00000473099 USP11P51784 963 aa14.58□□□□□ -0.08
VPS13D-205ENST00000473099 FSTL1Q12841 308 aa14.58□□□□□ -0.08
VPS13D-205ENST00000473099 COG2Q14746 738 aa14.58□□□□□ -0.08
VPS13D-205ENST00000473099 TPRNQ4KMQ1 711 aa14.58□□□□□ -0.08
VPS13D-205ENST00000473099 NOM1Q5C9Z4 860 aaKnown RBP14.58□□□□□ -0.08
VPS13D-205ENST00000473099 MOXD1Q6UVY6 613 aa14.58□□□□□ -0.08
VPS13D-205ENST00000473099 ENGASEQ8NFI3 743 aa14.58□□□□□ -0.08
VPS13D-205ENST00000473099 CCDC34Q96HJ3 373 aa14.58□□□□□ -0.08
VPS13D-205ENST00000473099 TIGD1Q96MW7 591 aa14.58□□□□□ -0.08
VPS13D-205ENST00000473099 TNMDQ9H2S6 317 aa14.58□□□□□ -0.08
VPS13D-205ENST00000473099 FZD1Q9UP38 647 aa14.58□□□□□ -0.08
VPS13D-205ENST00000473099 KIAA1217Q5T5P2 1943 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 ZNFX1Q9P2E3 1918 aaKnown RBP14.57□□□□□ -0.08
VPS13D-205ENST00000473099 MEIS2O14770 477 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 ADAMTS3O15072 1205 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 NEMFO60524 1076 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 CCNT1O60563 726 aaKnown RBP14.57□□□□□ -0.08
VPS13D-205ENST00000473099 DSG3P32926 999 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 LONP1P36776 959 aaKnown RBP14.57□□□□□ -0.08
VPS13D-205ENST00000473099 LETM2Q2VYF4 491 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 LDLRAD1Q5T700 205 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 PPP4R3AQ6IN85 833 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 CCDC174Q6PII3 467 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 LRSAM1Q6UWE0 723 aa14.57□□□□□ -0.08
VPS13D-205ENST00000473099 CATSPERGQ6ZRH7 1159 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms