RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 TLR2O60603 784 aa10.65□□□□□ -0.7
SMC4-214ENST00000472991 HSPA8P11142 646 aaKnown RBP10.65□□□□□ -0.7
SMC4-214ENST00000472991 HERVK_113P62684 666 aa10.65□□□□□ -0.7
SMC4-214ENST00000472991 WTAPQ15007 396 aa10.65□□□□□ -0.7
SMC4-214ENST00000472991 CCDC96Q2M329 555 aa10.65□□□□□ -0.7
SMC4-214ENST00000472991 TMEM67Q5HYA8 995 aa10.65□□□□□ -0.7
SMC4-214ENST00000472991 RNF19BQ6ZMZ0 732 aa10.65□□□□□ -0.7
SMC4-214ENST00000472991 CATSPERGQ6ZRH7 1159 aa10.65□□□□□ -0.7
SMC4-214ENST00000472991 PNMA1Q8ND90 353 aa10.65□□□□□ -0.7
SMC4-214ENST00000472991 ANKS1AQ92625 1134 aa10.65□□□□□ -0.7
SMC4-214ENST00000472991 TCEANC2Q96MN5 208 aa10.65□□□□□ -0.7
SMC4-214ENST00000472991 KAT14Q9H8E8 782 aa10.65□□□□□ -0.7
SMC4-214ENST00000472991 SENP2Q9HC62 589 aa10.65□□□□□ -0.7
SMC4-214ENST00000472991 CPA4Q9UI42 421 aa10.65□□□□□ -0.7
SMC4-214ENST00000472991 GPR25O00155 361 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 SH2B2O14492 632 aaPredicted RBP10.64□□□□□ -0.71
SMC4-214ENST00000472991 GDF9O60383 454 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 FLOT1O75955 427 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 BMP3P12645 472 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 CPA1P15085 419 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 CASTP20810 708 aaKnown RBP10.64□□□□□ -0.71
SMC4-214ENST00000472991 SLC1A4P43007 532 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 CTCFP49711 727 aaPredicted RBP10.64□□□□□ -0.71
SMC4-214ENST00000472991 BLOC1S2Q6QNY1 142 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 KCTD1Q719H9 257 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 IGDCC4Q8TDY8 1250 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 GMCL1Q96IK5 515 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 TMEM87BQ96K49 555 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 P2RX7Q99572 595 aaKnown RBP10.64□□□□□ -0.71
SMC4-214ENST00000472991 LY9Q9HBG7 655 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 PRDM9Q9NQV7 894 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 FBXO28Q9NVF7 368 aa10.64□□□□□ -0.71
SMC4-214ENST00000472991 FCF1Q9Y324 198 aaKnown RBP10.64□□□□□ -0.71
SMC4-214ENST00000472991 FRMPD2Q68DX3 1309 aaPredicted RBP10.63□□□□□ -0.71
SMC4-214ENST00000472991 WDR19Q8NEZ3 1342 aa10.63□□□□□ -0.71
SMC4-214ENST00000472991 TMEM232C9JQI7 657 aa10.63□□□□□ -0.71
SMC4-214ENST00000472991 PEX10O60683 326 aa10.63□□□□□ -0.71
SMC4-214ENST00000472991 HMGB1P09429 215 aaKnown RBP10.63□□□□□ -0.71
SMC4-214ENST00000472991 PDHBP11177 359 aa10.63□□□□□ -0.71
SMC4-214ENST00000472991 BCRP11274 1271 aa10.63□□□□□ -0.71
SMC4-214ENST00000472991 PSMA5P28066 241 aa10.63□□□□□ -0.71
SMC4-214ENST00000472991 LBX1P52954 281 aa10.63□□□□□ -0.71
SMC4-214ENST00000472991 EXOSC10Q01780 885 aaKnown RBP10.63□□□□□ -0.71
SMC4-214ENST00000472991 MSS51Q4VC12 460 aa10.63□□□□□ -0.71
SMC4-214ENST00000472991 C17orf99Q6UX52 265 aa10.63□□□□□ -0.71
SMC4-214ENST00000472991 DHX32Q7L7V1 743 aaKnown RBP10.63□□□□□ -0.71
SMC4-214ENST00000472991 DCAF4Q8WV16 495 aa10.63□□□□□ -0.71
SMC4-214ENST00000472991 ATG4CQ96DT6 458 aa10.63□□□□□ -0.71
SMC4-214ENST00000472991 MTA3Q9BTC8 594 aa10.63□□□□□ -0.71
SMC4-214ENST00000472991 PAGR1Q9BTK6 254 aa10.63□□□□□ -0.71
SMC4-214ENST00000472991 LCTP09848 1927 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 MYPNQ86TC9 1320 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 CCDC69A6NI79 296 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 SNHG28P0DPA3 235 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 RPS6KB1P23443 525 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 GCLCP48506 637 aaPredicted RBP10.62□□□□□ -0.71
SMC4-214ENST00000472991 STAT2P52630 851 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 ANAPC15P60006 121 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 IKQ13123 557 aaPredicted RBP10.62□□□□□ -0.71
SMC4-214ENST00000472991 COG2Q14746 738 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 FAM110CQ1W6H9 321 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 LBX2Q6XYB7 198 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 NFXL1Q6ZNB6 911 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 ANKRD13CQ8N6S4 541 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 GTF3C2Q8WUA4 911 aaPredicted RBP10.62□□□□□ -0.71
SMC4-214ENST00000472991 ZNF296Q8WUU4 475 aaPredicted RBP10.62□□□□□ -0.71
SMC4-214ENST00000472991 SLF1Q9BQI6 1058 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 UPF3BQ9BZI7 483 aaKnown RBP10.62□□□□□ -0.71
SMC4-214ENST00000472991 TXNRD2Q9NNW7 524 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 GPCPD1Q9NPB8 672 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 FEM1BQ9UK73 627 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 PPP1R9AQ9ULJ8 1098 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 ZNF236Q9UL36 1845 aa10.62□□□□□ -0.71
SMC4-214ENST00000472991 MCM3APO60318 1980 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 FKTNO75072 461 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 CNMDO75829 334 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 GOLGA8HP0CJ92 632 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 LIFRP42702 1097 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 RPIAP49247 311 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 ERVK-9P63128 1117 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 ERVK-24P63145 666 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 FGD1P98174 961 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 SP3Q02447 781 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 ZNF543Q08ER8 600 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 NOM1Q5C9Z4 860 aaKnown RBP10.61□□□□□ -0.71
SMC4-214ENST00000472991 TTBK2Q6IQ55 1244 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 Q6ZUG5 572 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 RUFY3Q7L099 469 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 FAM160B2Q86V87 743 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 RAB11FIP4Q86YS3 637 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 ZNF654Q8IZM8 581 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 CD99L2Q8TCZ2 262 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 KIFC2Q96AC6 838 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 MYL10Q9BUA6 226 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 TM6SF1Q9BZW5 370 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 HOXC10Q9NYD6 342 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 BTBD7Q9P203 1132 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 RBPJLQ9UBG7 517 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 MORF4L1Q9UBU8 362 aa10.61□□□□□ -0.71
SMC4-214ENST00000472991 RABGAP1Q9Y3P9 1069 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms