RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 TPD52L1Q16890 204 aaPredicted RBP8.67□□□□□ -1.02
CCDC171-205ENST00000472806 C16orf86Q6ZW13 317 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 FILIP1Q7Z7B0 1213 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 METTL16Q86W50 562 aaKnown RBP8.67□□□□□ -1.02
CCDC171-205ENST00000472806 BLIDQ8IZY5 108 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 MPNDQ8N594 471 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 IQUBQ8NA54 791 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 NEDD1Q8NHV4 660 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 TBC1D16Q8TBP0 767 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 ENOX1Q8TC92 643 aaKnown RBP8.67□□□□□ -1.02
CCDC171-205ENST00000472806 TGFBRAP1Q8WUH2 860 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 TNFRSF25Q93038 417 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 TRIM47Q96LD4 638 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 EYA3Q99504 573 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 GTPBP4Q9BZE4 634 aaKnown RBP8.67□□□□□ -1.02
CCDC171-205ENST00000472806 CSRNP2Q9H175 543 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 LRRC4BQ9NT99 713 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 RMND1Q9NWS8 449 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 IFNKQ9P0W0 207 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 SERTAD1Q9UHV2 236 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 PCDHA4Q9UN74 947 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 PCDHA5Q9Y5H7 936 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 LRRC37AA6NMS7 1700 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 MYO3BQ8WXR4 1341 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 CCDC194A0A1B0GVG4 234 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 UBE2Q2LH0YL09 131 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 POLRMTO00411 1230 aaKnown RBP8.66□□□□□ -1.02
CCDC171-205ENST00000472806 MYL1P05976 194 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 TOP1P11387 765 aaKnown RBP8.66□□□□□ -1.02
CCDC171-205ENST00000472806 SKILP12757 684 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 BMP1P13497 986 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 NPR1P16066 1061 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 GNA11P29992 359 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 HSPA1LP34931 641 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 GTF2F1P35269 517 aaKnown RBP eCLIP8.66□□□□□ -1.02
CCDC171-205ENST00000472806 SARSP49591 514 aaKnown RBP8.66□□□□□ -1.02
CCDC171-205ENST00000472806 PLCD1P51178 756 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 WNT7BP56706 349 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 MORC3Q14149 939 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 NCAPHQ15003 741 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 MFSD14BQ5SR56 506 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 SOGA3Q5TF21 947 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 RCSD1Q6JBY9 416 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 TMC6Q7Z403 805 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 AMIGO3Q86WK7 504 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 MAPKAPK5Q8IW41 473 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 CACTINQ8WUQ7 758 aaKnown RBP8.66□□□□□ -1.02
CCDC171-205ENST00000472806 ERCC4Q92889 916 aaPredicted RBP8.66□□□□□ -1.02
CCDC171-205ENST00000472806 GSDMAQ96QA5 445 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 NUDT12Q9BQG2 462 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 SPZ1Q9BXG8 430 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 ZC3H12CQ9C0D7 883 aaKnown RBP8.66□□□□□ -1.02
CCDC171-205ENST00000472806 XPO4Q9C0E2 1151 aaKnown RBP8.66□□□□□ -1.02
CCDC171-205ENST00000472806 SEC63Q9UGP8 760 aaKnown RBP8.66□□□□□ -1.02
CCDC171-205ENST00000472806 SWAP70Q9UH65 585 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 NRBP1Q9UHY1 535 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 MAN1B1Q9UKM7 699 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 ATP6V0A2Q9Y487 856 aa8.66□□□□□ -1.02
CCDC171-205ENST00000472806 C10orf71Q711Q0 1435 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 FLT1P17948 1338 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 PALM3A6NDB9 673 aaPredicted RBP8.65□□□□□ -1.02
CCDC171-205ENST00000472806 PARP1P09874 1014 aaKnown RBP8.65□□□□□ -1.02
CCDC171-205ENST00000472806 RASA1P20936 1047 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 CDK11BP21127 795 aaKnown RBP8.65□□□□□ -1.02
CCDC171-205ENST00000472806 LMOD1P29536 600 aaPredicted RBP8.65□□□□□ -1.02
CCDC171-205ENST00000472806 CDK8P49336 464 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 DIXDC1Q155Q3 683 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 PTPN14Q15678 1187 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 ZNF174Q15697 407 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 TXNRD1Q16881 649 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 CCDC144BQ3MJ40 725 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 CFAP100Q494V2 611 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 PIK3AP1Q6ZUJ8 805 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 KRT25Q7Z3Z0 450 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 FCHSD1Q86WN1 690 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 ANKRD20A12PQ8NF67 263 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 SPATA20Q8TB22 786 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 CCDC47Q96A33 483 aaKnown RBP8.65□□□□□ -1.02
CCDC171-205ENST00000472806 DHX58Q96C10 678 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 RRP36Q96EU6 259 aaKnown RBP8.65□□□□□ -1.02
CCDC171-205ENST00000472806 CTAGE1Q96RT6 745 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 MAGEF1Q9HAY2 307 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 C6orf50Q9HD87 102 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 BARHL2Q9NY43 387 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 STX8Q9UNK0 236 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 JAG2Q9Y219 1238 aa8.65□□□□□ -1.02
CCDC171-205ENST00000472806 PLIN4Q96Q06 1357 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 TERTO14746 1132 aaKnown RBP8.64□□□□□ -1.03
CCDC171-205ENST00000472806 PLSCR1O15162 318 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 NMT2O60551 498 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 HLA-DOAP06340 250 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 FDX1P10109 184 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 TNNT1P13805 278 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 HOXA7P31268 230 aaPredicted RBP8.64□□□□□ -1.03
CCDC171-205ENST00000472806 PRPHP41219 470 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 SH3BP2P78314 561 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 SPAG1Q07617 926 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 LRMPQ12912 555 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 FILIP1LQ4L180 1135 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 ASPRV1Q53RT3 343 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms