RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 ADSSL1Q8N142 457 aa7.14□□□□□ -1.27
SIK3-208ENST00000472648 MAGEB6Q8N7X4 407 aa7.14□□□□□ -1.27
SIK3-208ENST00000472648 NKD2Q969F2 451 aaPredicted RBP7.14□□□□□ -1.27
SIK3-208ENST00000472648 CNTNAP3BQ96NU0 1288 aa7.14□□□□□ -1.27
SIK3-208ENST00000472648 RAD9AQ99638 391 aa7.14□□□□□ -1.27
SIK3-208ENST00000472648 CNTNAP3Q9BZ76 1288 aa7.14□□□□□ -1.27
SIK3-208ENST00000472648 GREB1LQ9C091 1923 aaPredicted RBP7.14□□□□□ -1.27
SIK3-208ENST00000472648 USP44Q9H0E7 712 aa7.14□□□□□ -1.27
SIK3-208ENST00000472648 ALG13Q9NP73 1137 aaKnown RBP7.14□□□□□ -1.27
SIK3-208ENST00000472648 TRMT13Q9NUP7 481 aaKnown RBP7.14□□□□□ -1.27
SIK3-208ENST00000472648 PA2G4Q9UQ80 394 aaKnown RBP7.14□□□□□ -1.27
SIK3-208ENST00000472648 GVINP1Q7Z2Y8 2422 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 ASTN1O14525 1302 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 DNAJC25-GNG10A0A024R161 153 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.13□□□□□ -1.27
SIK3-208ENST00000472648 VWA5AO00534 786 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 MBTPS2O43462 519 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 GJB5O95377 273 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 IQCF3P0C7M6 154 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 ARID4AP29374 1257 aaPredicted RBP7.13□□□□□ -1.27
SIK3-208ENST00000472648 AVPR2P30518 371 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 NBL1P41271 181 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 MCAMP43121 646 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 SLC4A3P48751 1232 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 NUBP1P53384 320 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 DYNLL1P63167 89 aaKnown RBP7.13□□□□□ -1.27
SIK3-208ENST00000472648 DEFB103AP81534 67 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 ZXDAP98168 799 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 SIGLEC14Q08ET2 396 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 BFSP2Q13515 415 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 CLUL1Q15846 466 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 TCEAL5Q5H9L2 206 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 FAM47CQ5HY64 1035 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 MCTP2Q6DN12 878 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 SNRNP48Q6IEG0 339 aaKnown RBP7.13□□□□□ -1.27
SIK3-208ENST00000472648 RPAINQ86UA6 219 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 CERS3Q8IU89 383 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.13□□□□□ -1.27
SIK3-208ENST00000472648 C17orf80Q9BSJ5 609 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 TEX13BQ9BXU2 312 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 NSUN3Q9H649 340 aaKnown RBP7.13□□□□□ -1.27
SIK3-208ENST00000472648 VCPKMTQ9H867 229 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 ZNF214Q9UL59 606 aaPredicted RBP7.13□□□□□ -1.27
SIK3-208ENST00000472648 ADAMTS5Q9UNA0 930 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 MAP1BP46821 2468 aaKnown RBP7.13□□□□□ -1.27
SIK3-208ENST00000472648 FANCMQ8IYD8 2048 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 KIAA1217Q5T5P2 1943 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 CHD6Q8TD26 2715 aa7.13□□□□□ -1.27
SIK3-208ENST00000472648 TPRP12270 2363 aaKnown RBP7.12□□□□□ -1.27
SIK3-208ENST00000472648 DYNC1LI2O43237 492 aaPredicted RBP7.12□□□□□ -1.27
SIK3-208ENST00000472648 GALR2O43603 387 aaPredicted RBP7.12□□□□□ -1.27
SIK3-208ENST00000472648 NCK2O43639 380 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 RAD21O60216 631 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 POLR3DP05423 398 aaPredicted RBP7.12□□□□□ -1.27
SIK3-208ENST00000472648 UQCRFS1P1P0C7P4 283 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 UBTFL1P0CB47 393 aaPredicted RBP7.12□□□□□ -1.27
SIK3-208ENST00000472648 ICA1Q05084 483 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 TFCP2Q12800 502 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 SMAD4Q13485 552 aaKnown RBP7.12□□□□□ -1.27
SIK3-208ENST00000472648 LRRFIP1Q32MZ4 808 aaKnown RBP7.12□□□□□ -1.27
SIK3-208ENST00000472648 FAM117BQ6P1L5 589 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 TMEM179Q6ZVK1 233 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 CCDC144CPQ8IYA2 1237 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 ANKRD35Q8N283 1001 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 COPRSQ9NQ92 184 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 FBXO28Q9NVF7 368 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 POLR3EQ9NVU0 708 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 PPP1R9AQ9ULJ8 1098 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 NOD1Q9Y239 953 aa7.12□□□□□ -1.27
SIK3-208ENST00000472648 PLXNA4Q9HCM2 1894 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 PTPRCP08575 1304 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 EFCAB14O75071 495 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 CYP7A1P22680 504 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 MKRN4PQ13434 485 aaPredicted RBP7.11□□□□□ -1.27
SIK3-208ENST00000472648 COL19A1Q14993 1142 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 CNKSR3Q6P9H4 555 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 CLEC10AQ8IUN9 316 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 CCDC155Q8N6L0 562 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 MIGA1Q8NAN2 632 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 RMDN1Q96DB5 314 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 SAMD11Q96NU1 681 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 KATNBL1Q9H079 304 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 GOPCQ9HD26 462 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 GPHNQ9NQX3 736 aaPredicted RBP7.11□□□□□ -1.27
SIK3-208ENST00000472648 SNRKQ9NRH2 765 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 GNEQ9Y223 722 aaKnown RBP7.11□□□□□ -1.27
SIK3-208ENST00000472648 TMX2Q9Y320 296 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 INSL6Q9Y581 213 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 CTDP1Q9Y5B0 961 aaPredicted RBP7.11□□□□□ -1.27
SIK3-208ENST00000472648 ACACBO00763 2458 aa7.11□□□□□ -1.27
SIK3-208ENST00000472648 LTBRP36941 435 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 PLCD1P51178 756 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 GPM6BQ13491 265 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 EPC2Q52LR7 807 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 TTC39AQ5SRH9 613 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 FRMD5Q7Z6J6 570 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 REPS2Q8NFH8 660 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 FGD4Q96M96 766 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 FBXO40Q9UH90 709 aa7.1□□□□□ -1.27
SIK3-208ENST00000472648 CD207Q9UJ71 328 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms