RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 NBPF6Q5VWK0 638 aa10.57□□□□□ -0.72
SGCE-210ENST00000472326 GALNT18Q6P9A2 607 aa10.57□□□□□ -0.72
SGCE-210ENST00000472326 KSR1Q8IVT5 923 aa10.57□□□□□ -0.72
SGCE-210ENST00000472326 NUP43Q8NFH3 380 aa10.57□□□□□ -0.72
SGCE-210ENST00000472326 NBPF4Q96M43 638 aa10.57□□□□□ -0.72
SGCE-210ENST00000472326 NKX2-4Q9H2Z4 354 aa10.57□□□□□ -0.72
SGCE-210ENST00000472326 KCNK12Q9HB15 430 aa10.57□□□□□ -0.72
SGCE-210ENST00000472326 CWC22Q9HCG8 908 aaKnown RBP10.57□□□□□ -0.72
SGCE-210ENST00000472326 YBX2Q9Y2T7 364 aaKnown RBP10.57□□□□□ -0.72
SGCE-210ENST00000472326 MSRB2Q9Y3D2 182 aa10.57□□□□□ -0.72
SGCE-210ENST00000472326 A0A1W2PQU0 124 aa10.56□□□□□ -0.72
SGCE-210ENST00000472326 WTIPA6NIX2 430 aaPredicted RBP10.56□□□□□ -0.72
SGCE-210ENST00000472326 TBC1D8O95759 1140 aa10.56□□□□□ -0.72
SGCE-210ENST00000472326 PRKCAP17252 672 aa10.56□□□□□ -0.72
SGCE-210ENST00000472326 SF1Q15637 639 aaKnown RBP10.56□□□□□ -0.72
SGCE-210ENST00000472326 CPNE8Q86YQ8 564 aa10.56□□□□□ -0.72
SGCE-210ENST00000472326 INTS4Q96HW7 963 aaKnown RBP10.56□□□□□ -0.72
SGCE-210ENST00000472326 EPN3Q9H201 632 aa10.56□□□□□ -0.72
SGCE-210ENST00000472326 CLEC1BQ9P126 229 aa10.56□□□□□ -0.72
SGCE-210ENST00000472326 THBDP07204 575 aa10.55□□□□□ -0.72
SGCE-210ENST00000472326 SDHBP21912 280 aa10.55□□□□□ -0.72
SGCE-210ENST00000472326 GRIA2P42262 883 aa10.55□□□□□ -0.72
SGCE-210ENST00000472326 COPS5Q92905 334 aa10.55□□□□□ -0.72
SGCE-210ENST00000472326 CYP26B1Q9NR63 512 aa10.55□□□□□ -0.72
SGCE-210ENST00000472326 AGRPO00253 132 aa10.54□□□□□ -0.72
SGCE-210ENST00000472326 PDPK1O15530 556 aa10.54□□□□□ -0.72
SGCE-210ENST00000472326 SNRPB2P08579 225 aaKnown RBP10.54□□□□□ -0.72
SGCE-210ENST00000472326 PLS3P13797 630 aa10.54□□□□□ -0.72
SGCE-210ENST00000472326 ECI1P42126 302 aa10.54□□□□□ -0.72
SGCE-210ENST00000472326 PPP2R2AP63151 447 aa10.54□□□□□ -0.72
SGCE-210ENST00000472326 SERINC3Q13530 473 aa10.54□□□□□ -0.72
SGCE-210ENST00000472326 OGFOD2Q6N063 350 aa10.54□□□□□ -0.72
SGCE-210ENST00000472326 SPATC1Q76KD6 591 aa10.54□□□□□ -0.72
SGCE-210ENST00000472326 NSUN3Q9H649 340 aaKnown RBP10.54□□□□□ -0.72
SGCE-210ENST00000472326 SIRPGQ9P1W8 387 aa10.54□□□□□ -0.72
SGCE-210ENST00000472326 A0A1W2PQ27 194 aa10.53□□□□□ -0.72
SGCE-210ENST00000472326 A0A1W2PQ64 194 aa10.53□□□□□ -0.72
SGCE-210ENST00000472326 A0A1W2PQC6 194 aa10.53□□□□□ -0.72
SGCE-210ENST00000472326 A0A1W2PQD8 194 aa10.53□□□□□ -0.72
SGCE-210ENST00000472326 MSL3P1P0C860 447 aa10.53□□□□□ -0.72
SGCE-210ENST00000472326 PDE6BP35913 854 aa10.53□□□□□ -0.72
SGCE-210ENST00000472326 PRSS53Q2L4Q9 553 aa10.53□□□□□ -0.72
SGCE-210ENST00000472326 ST13P5Q8NFI4 369 aaPredicted RBP10.53□□□□□ -0.72
SGCE-210ENST00000472326 FMNL2Q96PY5 1086 aa10.53□□□□□ -0.72
SGCE-210ENST00000472326 SLC6A17Q9H1V8 727 aa10.53□□□□□ -0.72
SGCE-210ENST00000472326 PFDN2Q9UHV9 154 aa10.53□□□□□ -0.72
SGCE-210ENST00000472326 NPHP3-ACAD11A0A0J9YXS1 232 aa10.52□□□□□ -0.73
SGCE-210ENST00000472326 PAMP19021 973 aa10.52□□□□□ -0.73
SGCE-210ENST00000472326 KCNJ6P48051 423 aa10.52□□□□□ -0.73
SGCE-210ENST00000472326 MVKQ03426 396 aa10.52□□□□□ -0.73
SGCE-210ENST00000472326 ADGRF1Q5T601 910 aa10.52□□□□□ -0.73
SGCE-210ENST00000472326 FRS2Q8WU20 508 aa10.52□□□□□ -0.73
SGCE-210ENST00000472326 DRC1Q96MC2 740 aa10.52□□□□□ -0.73
SGCE-210ENST00000472326 FAM53CQ9NYF3 392 aa10.52□□□□□ -0.73
SGCE-210ENST00000472326 ACSL6Q9UKU0 697 aa10.52□□□□□ -0.73
SGCE-210ENST00000472326 FAM221BA6H8Z2 402 aa10.51□□□□□ -0.73
SGCE-210ENST00000472326 TACR1P25103 407 aa10.51□□□□□ -0.73
SGCE-210ENST00000472326 HOXC12P31275 282 aa10.51□□□□□ -0.73
SGCE-210ENST00000472326 L1CAMP32004 1257 aa10.51□□□□□ -0.73
SGCE-210ENST00000472326 CYP4F8P98187 520 aa10.51□□□□□ -0.73
SGCE-210ENST00000472326 MBLAC2Q68D91 279 aa10.51□□□□□ -0.73
SGCE-210ENST00000472326 CCDC113Q9H0I3 377 aa10.51□□□□□ -0.73
SGCE-210ENST00000472326 CRTAC1Q9NQ79 661 aa10.51□□□□□ -0.73
SGCE-210ENST00000472326 CAPNS1P04632 268 aa10.5□□□□□ -0.73
SGCE-210ENST00000472326 PNLIPP16233 465 aa10.5□□□□□ -0.73
SGCE-210ENST00000472326 RASA3Q14644 834 aa10.5□□□□□ -0.73
SGCE-210ENST00000472326 MTERF2Q49AM1 385 aa10.5□□□□□ -0.73
SGCE-210ENST00000472326 NPLOC4Q8TAT6 608 aa10.5□□□□□ -0.73
SGCE-210ENST00000472326 DEPDC7Q96QD5 511 aa10.5□□□□□ -0.73
SGCE-210ENST00000472326 TMEFF2Q9UIK5 374 aaPredicted RBP10.5□□□□□ -0.73
SGCE-210ENST00000472326 GFRA1P56159 465 aa10.49□□□□□ -0.73
SGCE-210ENST00000472326 RASGRF1Q13972 1273 aa10.49□□□□□ -0.73
SGCE-210ENST00000472326 ZNF648Q5T619 568 aaPredicted RBP10.49□□□□□ -0.73
SGCE-210ENST00000472326 ZNF605Q86T29 641 aa10.49□□□□□ -0.73
SGCE-210ENST00000472326 TMEM145Q8NBT3 493 aa10.49□□□□□ -0.73
SGCE-210ENST00000472326 IER2Q9BTL4 223 aa10.49□□□□□ -0.73
SGCE-210ENST00000472326 EPB41L4BQ9H329 900 aa10.49□□□□□ -0.73
SGCE-210ENST00000472326 DCP1AQ9NPI6 582 aaPredicted RBP10.49□□□□□ -0.73
SGCE-210ENST00000472326 ARHGEF4Q9NR80 690 aa10.49□□□□□ -0.73
SGCE-210ENST00000472326 SNTG2Q9NY99 539 aa10.49□□□□□ -0.73
SGCE-210ENST00000472326 ARNTLO00327 626 aa10.48□□□□□ -0.73
SGCE-210ENST00000472326 DIAPH1O60610 1272 aaKnown RBP10.48□□□□□ -0.73
SGCE-210ENST00000472326 INF2Q27J81 1249 aa10.48□□□□□ -0.73
SGCE-210ENST00000472326 YOD1Q5VVQ6 348 aaPredicted RBP10.48□□□□□ -0.73
SGCE-210ENST00000472326 IRF2BP1Q8IU81 584 aa10.48□□□□□ -0.73
SGCE-210ENST00000472326 KREMEN2Q8NCW0 462 aa10.48□□□□□ -0.73
SGCE-210ENST00000472326 SGSM3Q96HU1 749 aa10.48□□□□□ -0.73
SGCE-210ENST00000472326 SRPK1Q96SB4 655 aaKnown RBP10.48□□□□□ -0.73
SGCE-210ENST00000472326 GULP1Q9UBP9 304 aa10.48□□□□□ -0.73
SGCE-210ENST00000472326 RWDD3Q9Y3V2 267 aa10.48□□□□□ -0.73
SGCE-210ENST00000472326 C7orf72A4D263 438 aa10.47□□□□□ -0.73
SGCE-210ENST00000472326 IQCA1LA6NCM1 817 aa10.47□□□□□ -0.73
SGCE-210ENST00000472326 PPP1R11O60927 126 aaPredicted RBP10.47□□□□□ -0.73
SGCE-210ENST00000472326 SCG5P05408 212 aa10.47□□□□□ -0.73
SGCE-210ENST00000472326 ARL4AP40617 200 aa10.47□□□□□ -0.73
SGCE-210ENST00000472326 HSP90AA2PQ14568 343 aaPredicted RBP10.47□□□□□ -0.73
SGCE-210ENST00000472326 SOGA3Q5TF21 947 aa10.47□□□□□ -0.73
SGCE-210ENST00000472326 DENND5AQ6IQ26 1287 aa10.47□□□□□ -0.73
SGCE-210ENST00000472326 CCDC103Q8IW40 242 aa10.47□□□□□ -0.73
SGCE-210ENST00000472326 AARSD1Q9BTE6 412 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms