RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 REPS2Q8NFH8 660 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 CUL5Q93034 780 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 COA7Q96BR5 231 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 C8orf76Q96K31 380 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 TRERF1Q96PN7 1200 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 BRMS1Q9HCU9 246 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 C6orf50Q9HD87 102 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 HOMER2Q9NSB8 354 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 ZNF214Q9UL59 606 aaPredicted RBP19.41■□□□□ 0.7
CCM2-205ENST00000472223 TBC1D8O95759 1140 aa19.4■□□□□ 0.7
CCM2-205ENST00000472223 CALML3P27482 149 aa19.4■□□□□ 0.7
CCM2-205ENST00000472223 GNA11P29992 359 aa19.4■□□□□ 0.7
CCM2-205ENST00000472223 MRPL12P52815 198 aaKnown RBP19.4■□□□□ 0.7
CCM2-205ENST00000472223 SAFBQ15424 915 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCM2-205ENST00000472223 LARP1BQ659C4 914 aaKnown RBP19.4■□□□□ 0.7
CCM2-205ENST00000472223 C17orf99Q6UX52 265 aa19.4■□□□□ 0.7
CCM2-205ENST00000472223 SHCBP1Q8NEM2 672 aa19.4■□□□□ 0.7
CCM2-205ENST00000472223 BICD2Q8TD16 824 aa19.4■□□□□ 0.7
CCM2-205ENST00000472223 GPKOWQ92917 476 aaPredicted RBP eCLIP19.4■□□□□ 0.7
CCM2-205ENST00000472223 CFHR5Q9BXR6 569 aa19.4■□□□□ 0.7
CCM2-205ENST00000472223 ACAD9Q9H845 621 aa19.4■□□□□ 0.7
CCM2-205ENST00000472223 IVNS1ABPQ9Y6Y0 642 aa19.4■□□□□ 0.7
CCM2-205ENST00000472223 THSD7BQ9C0I4 1608 aa19.4■□□□□ 0.7
CCM2-205ENST00000472223 MAPK4P31152 587 aa19.39■□□□□ 0.69
CCM2-205ENST00000472223 ARHGEF6Q15052 776 aa19.39■□□□□ 0.69
CCM2-205ENST00000472223 PKN1Q16512 942 aa19.39■□□□□ 0.69
CCM2-205ENST00000472223 WWC2Q6AWC2 1192 aa19.39■□□□□ 0.69
CCM2-205ENST00000472223 SAMD3Q8N6K7 520 aa19.39■□□□□ 0.69
CCM2-205ENST00000472223 MOV10L1Q9BXT6 1211 aaKnown RBP19.39■□□□□ 0.69
CCM2-205ENST00000472223 TXNRD2Q9NNW7 524 aa19.39■□□□□ 0.69
CCM2-205ENST00000472223 RNF146Q9NTX7 359 aa19.39■□□□□ 0.69
CCM2-205ENST00000472223 ZNF536O15090 1300 aa19.39■□□□□ 0.69
CCM2-205ENST00000472223 A0A0G2JMZ2 1700 aa19.38■□□□□ 0.69
CCM2-205ENST00000472223 SMCO2A6NFE2 343 aa19.38■□□□□ 0.69
CCM2-205ENST00000472223 STXBP3O00186 592 aa19.38■□□□□ 0.69
CCM2-205ENST00000472223 CNMDO75829 334 aa19.38■□□□□ 0.69
CCM2-205ENST00000472223 BCRP11274 1271 aa19.38■□□□□ 0.69
CCM2-205ENST00000472223 FDPSP14324 419 aaKnown RBP19.38■□□□□ 0.69
CCM2-205ENST00000472223 ADCY7P51828 1080 aa19.38■□□□□ 0.69
CCM2-205ENST00000472223 GNL2Q13823 731 aaKnown RBP19.38■□□□□ 0.69
CCM2-205ENST00000472223 Q3C1V9 767 aa19.38■□□□□ 0.69
CCM2-205ENST00000472223 GALNT17Q6IS24 598 aa19.38■□□□□ 0.69
CCM2-205ENST00000472223 TEX2Q8IWB9 1127 aa19.38■□□□□ 0.69
CCM2-205ENST00000472223 DNAJC5GQ8N7S2 189 aa19.38■□□□□ 0.69
CCM2-205ENST00000472223 MAF1Q9H063 256 aa19.38■□□□□ 0.69
CCM2-205ENST00000472223 PSTPIP2Q9H939 334 aa19.38■□□□□ 0.69
CCM2-205ENST00000472223 VPS54Q9P1Q0 977 aa19.38■□□□□ 0.69
CCM2-205ENST00000472223 PPP1R11O60927 126 aaPredicted RBP19.37■□□□□ 0.69
CCM2-205ENST00000472223 ERCC3P19447 782 aa19.37■□□□□ 0.69
CCM2-205ENST00000472223 SP3Q02447 781 aa19.37■□□□□ 0.69
CCM2-205ENST00000472223 KCTD2Q14681 263 aa19.37■□□□□ 0.69
CCM2-205ENST00000472223 MCTP2Q6DN12 878 aa19.37■□□□□ 0.69
CCM2-205ENST00000472223 ANKRD35Q8N283 1001 aa19.37■□□□□ 0.69
CCM2-205ENST00000472223 IPO9Q96P70 1041 aaKnown RBP19.37■□□□□ 0.69
CCM2-205ENST00000472223 MAP3K20Q9NYL2 800 aaKnown RBP19.37■□□□□ 0.69
CCM2-205ENST00000472223 ADGRA2Q96PE1 1338 aa19.36■□□□□ 0.69
CCM2-205ENST00000472223 STRNO43815 780 aa19.36■□□□□ 0.69
CCM2-205ENST00000472223 DTNBO60941 627 aa19.36■□□□□ 0.69
CCM2-205ENST00000472223 FCER1AP12319 257 aa19.36■□□□□ 0.69
CCM2-205ENST00000472223 FOSBP53539 338 aa19.36■□□□□ 0.69
CCM2-205ENST00000472223 NSMFQ6X4W1 530 aa19.36■□□□□ 0.69
CCM2-205ENST00000472223 RGS22Q8NE09 1264 aa19.36■□□□□ 0.69
CCM2-205ENST00000472223 PFASO15067 1338 aa19.35■□□□□ 0.69
CCM2-205ENST00000472223 ESYT2A0FGR8 921 aa19.35■□□□□ 0.69
CCM2-205ENST00000472223 GCOM1H8Y6P7 765 aaPredicted RBP19.35■□□□□ 0.69
CCM2-205ENST00000472223 CFBP00751 764 aa19.35■□□□□ 0.69
CCM2-205ENST00000472223 POLR2MP0CAP2 368 aa19.35■□□□□ 0.69
CCM2-205ENST00000472223 FCGRTP55899 365 aa19.35■□□□□ 0.69
CCM2-205ENST00000472223 RNF207Q6ZRF8 634 aa19.35■□□□□ 0.69
CCM2-205ENST00000472223 PLEKHH3Q7Z736 793 aa19.35■□□□□ 0.69
CCM2-205ENST00000472223 AIFM3Q96NN9 605 aa19.35■□□□□ 0.69
CCM2-205ENST00000472223 MMP19Q99542 508 aa19.35■□□□□ 0.69
CCM2-205ENST00000472223 ZMYND12Q9H0C1 365 aa19.35■□□□□ 0.69
CCM2-205ENST00000472223 SLC5A4Q9NY91 659 aa19.35■□□□□ 0.69
CCM2-205ENST00000472223 RIPK3Q9Y572 518 aa19.35■□□□□ 0.69
CCM2-205ENST00000472223 PEX10O60683 326 aa19.34■□□□□ 0.69
CCM2-205ENST00000472223 KRT40Q6A162 431 aa19.34■□□□□ 0.69
CCM2-205ENST00000472223 POTEEQ6S8J3 1075 aa19.34■□□□□ 0.69
CCM2-205ENST00000472223 FBXO18Q8NFZ0 1043 aa19.34■□□□□ 0.69
CCM2-205ENST00000472223 EHMT1Q9H9B1 1298 aa19.34■□□□□ 0.69
CCM2-205ENST00000472223 EFCC1Q9HA90 598 aa19.34■□□□□ 0.69
CCM2-205ENST00000472223 RIC8AQ9NPQ8 531 aa19.34■□□□□ 0.69
CCM2-205ENST00000472223 WBP1LQ9NX94 342 aa19.34■□□□□ 0.69
CCM2-205ENST00000472223 PCDHA4Q9UN74 947 aa19.34■□□□□ 0.69
CCM2-205ENST00000472223 SPDYE3A6NKU9 549 aa19.33■□□□□ 0.68
CCM2-205ENST00000472223 GPR25O00155 361 aa19.33■□□□□ 0.68
CCM2-205ENST00000472223 TNPO2O14787 897 aaKnown RBP19.33■□□□□ 0.68
CCM2-205ENST00000472223 FKTNO75072 461 aa19.33■□□□□ 0.68
CCM2-205ENST00000472223 HOXD10P28358 340 aa19.33■□□□□ 0.68
CCM2-205ENST00000472223 KRT2P35908 639 aa19.33■□□□□ 0.68
CCM2-205ENST00000472223 NOM1Q5C9Z4 860 aaKnown RBP19.33■□□□□ 0.68
CCM2-205ENST00000472223 MUM1L1Q5H9M0 696 aa19.33■□□□□ 0.68
CCM2-205ENST00000472223 MCTP1Q6DN14 999 aa19.33■□□□□ 0.68
CCM2-205ENST00000472223 ERO1AQ96HE7 468 aa19.33■□□□□ 0.68
CCM2-205ENST00000472223 MPHOSPH6Q99547 160 aaKnown RBP19.33■□□□□ 0.68
CCM2-205ENST00000472223 PHF20Q9BVI0 1012 aa19.33■□□□□ 0.68
CCM2-205ENST00000472223 PORCNQ9H237 461 aa19.33■□□□□ 0.68
CCM2-205ENST00000472223 KCNJ14Q9UNX9 436 aa19.33■□□□□ 0.68
CCM2-205ENST00000472223 VPS37CA5D8V6 355 aaPredicted RBP19.32■□□□□ 0.68
CCM2-205ENST00000472223 B4DLN1 442 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms