RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 KRT25Q7Z3Z0 450 aa16.94■□□□□ 0.3
UBXN11-213ENST00000472155 AKR1B15C9JRZ8 316 aaPredicted RBP16.94■□□□□ 0.3
UBXN11-213ENST00000472155 NRDCO43847 1150 aa16.94■□□□□ 0.3
UBXN11-213ENST00000472155 SNHG28P0DPA3 235 aa16.94■□□□□ 0.3
UBXN11-213ENST00000472155 SNAP25P60880 206 aa16.94■□□□□ 0.3
UBXN11-213ENST00000472155 CCDC93Q567U6 631 aa16.94■□□□□ 0.3
UBXN11-213ENST00000472155 SH3BP5LQ7L8J4 393 aa16.94■□□□□ 0.3
UBXN11-213ENST00000472155 ADSSL1Q8N142 457 aa16.94■□□□□ 0.3
UBXN11-213ENST00000472155 MAP7D2Q96T17 732 aa16.94■□□□□ 0.3
UBXN11-213ENST00000472155 CCSER1Q9C0I3 900 aa16.94■□□□□ 0.3
UBXN11-213ENST00000472155 POTEMA6NI47 508 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 KCNJ18B7U540 433 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 N4BP3O15049 544 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 GNA11P29992 359 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 KCNJ12Q14500 433 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 TCP11X2Q5H9J9 407 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 STX10O60499 249 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 TTLL1O95922 423 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 COPB1P53618 953 aaKnown RBP16.93■□□□□ 0.3
UBXN11-213ENST00000472155 ZNF543Q08ER8 600 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 STK4Q13043 487 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 TEKT1Q969V4 418 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 L2HGDHQ9H9P8 463 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 PARP3Q9Y6F1 533 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 PLIN4Q96Q06 1357 aa16.93■□□□□ 0.3
UBXN11-213ENST00000472155 TNNI2P48788 182 aa16.92■□□□□ 0.3
UBXN11-213ENST00000472155 NT5C2P49902 561 aa16.92■□□□□ 0.3
UBXN11-213ENST00000472155 RBM5P52756 815 aaKnown RBP eCLIP16.92■□□□□ 0.3
UBXN11-213ENST00000472155 CCDC96Q2M329 555 aa16.92■□□□□ 0.3
UBXN11-213ENST00000472155 ERCC6LQ2NKX8 1250 aa16.92■□□□□ 0.3
UBXN11-213ENST00000472155 GLIPR1L2Q4G1C9 344 aa16.92■□□□□ 0.3
UBXN11-213ENST00000472155 MASTLQ96GX5 879 aa16.92■□□□□ 0.3
UBXN11-213ENST00000472155 SLX4Q8IY92 1834 aa16.92■□□□□ 0.3
UBXN11-213ENST00000472155 CBX1P83916 185 aa16.92■□□□□ 0.3
UBXN11-213ENST00000472155 LIMA1Q9UHB6 759 aaKnown RBP16.92■□□□□ 0.3
UBXN11-213ENST00000472155 MFAP3LO75121 409 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 SLU7O95391 586 aaKnown RBP16.91■□□□□ 0.3
UBXN11-213ENST00000472155 ALDH1B1P30837 517 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 PRPHP41219 470 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 JAG1P78504 1218 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 TMC4Q7Z404 712 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 C2CD5Q86YS7 1000 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 CCDC12Q8WUD4 166 aaPredicted RBP16.91■□□□□ 0.3
UBXN11-213ENST00000472155 CCDC94Q9BW85 323 aaPredicted RBP16.91■□□□□ 0.3
UBXN11-213ENST00000472155 TRIM9Q9C026 710 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 ZMYND15Q9H091 742 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 LZTFL1Q9NQ48 299 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 FAM198AQ9UFP1 575 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 MYH4Q9Y623 1939 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 ADCY7P51828 1080 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 KCNK18Q7Z418 384 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 PPFIBP1Q86W92 1011 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 MTMR9Q96QG7 549 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 SRRTQ9BXP5 876 aaKnown RBP16.91■□□□□ 0.3
UBXN11-213ENST00000472155 EPC1Q9H2F5 836 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 SIPA1L1O43166 1804 aa16.91■□□□□ 0.3
UBXN11-213ENST00000472155 URI1O94763 535 aaPredicted RBP16.9■□□□□ 0.3
UBXN11-213ENST00000472155 PDE6BP35913 854 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 GRB10Q13322 594 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 ECM1Q16610 540 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 CT47A1Q5JQC4 288 aaPredicted RBP16.9■□□□□ 0.3
UBXN11-213ENST00000472155 QSER1Q2KHR3 1735 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 LRRC10BA6NIK2 292 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 USP17L15C9J2P7 530 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 USP17L13C9JLJ4 530 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 USP17L11C9JVI0 530 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 USP17L18D6R9N7 530 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 USP17L22D6RA61 530 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 USP17L17D6RBQ6 530 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 USP17L19D6RCP7 530 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 USP17L20D6RJB6 530 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 RHOBTB3O94955 611 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 GDF11O95390 407 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 GNG11P61952 73 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 ERVK-24P63145 666 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 USP17L24Q0WX57 530 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 AOC3Q16853 763 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 ASPRV1Q53RT3 343 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 USP17L6PQ6QN14 398 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 HHIPL2Q6UWX4 724 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 SIAH1Q8IUQ4 282 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 ACRBPQ8NEB7 543 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 PNMA5Q96PV4 448 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 NUP88Q99567 741 aaPredicted RBP16.9■□□□□ 0.3
UBXN11-213ENST00000472155 DUSP9Q99956 384 aaKnown RBP16.9■□□□□ 0.3
UBXN11-213ENST00000472155 BLOC1S4Q9NUP1 217 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 RMND1Q9NWS8 449 aa16.9■□□□□ 0.3
UBXN11-213ENST00000472155 KIF2AO00139 706 aaPredicted RBP16.89■□□□□ 0.29
UBXN11-213ENST00000472155 ECE2O60344 883 aa16.89■□□□□ 0.29
UBXN11-213ENST00000472155 KLK7P49862 253 aa16.89■□□□□ 0.29
UBXN11-213ENST00000472155 ASIC1P78348 528 aa16.89■□□□□ 0.29
UBXN11-213ENST00000472155 PDE4DQ08499 809 aa16.89■□□□□ 0.29
UBXN11-213ENST00000472155 MCM6Q14566 821 aa16.89■□□□□ 0.29
UBXN11-213ENST00000472155 CALCRLQ16602 461 aa16.89■□□□□ 0.29
UBXN11-213ENST00000472155 MTERF4Q7Z6M4 381 aaKnown RBP16.89■□□□□ 0.29
UBXN11-213ENST00000472155 GIMAP8Q8ND71 665 aaPredicted RBP16.89■□□□□ 0.29
UBXN11-213ENST00000472155 GLIS3Q8NEA6 775 aa16.89■□□□□ 0.29
UBXN11-213ENST00000472155 PYM1Q9BRP8 204 aaKnown RBP16.89■□□□□ 0.29
UBXN11-213ENST00000472155 PDGFDQ9GZP0 370 aaPredicted RBP16.89■□□□□ 0.29
UBXN11-213ENST00000472155 SUGT1Q9Y2Z0 365 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms