RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 RPTNQ6XPR3 784 aa5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 ADAT2Q7Z6V5 191 aaKnown RBP5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 FAM129CQ86XR2 697 aa5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 C20orf173Q96LM9 149 aa5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 ZDHHC15Q96MV8 337 aa5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 PWWP2AQ96N64 755 aa5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 KCNC2Q96PR1 638 aa5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 SRRTQ9BXP5 876 aaKnown RBP5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 PDLIM7Q9NR12 457 aa5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 GINM1Q9NU53 330 aa5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 DBR1Q9UK59 544 aaKnown RBP5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 NCANO14594 1321 aa5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 IRS4O14654 1257 aaPredicted RBP5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 CYBBP04839 570 aa5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 CD3EP07766 207 aa5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 L1CAMP32004 1257 aa5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 CEBPAP49715 358 aaPredicted RBP5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 NCKAP1LP55160 1127 aa5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 PAK2Q13177 524 aa5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 TARBP2Q15633 366 aaKnown RBP5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 VMACQ2NL98 169 aa5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 HEATR6Q6AI08 1181 aaKnown RBP5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 CCDC81Q6ZN84 652 aa5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 LSRQ86X29 649 aaPredicted RBP5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 IGDCC3Q8IVU1 814 aa5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 TMEFF1Q8IYR6 380 aa5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 PTCHD1Q96NR3 888 aa5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 GBP3Q9H0R5 595 aa5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 EFR3BQ9Y2G0 817 aa5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 PCDHA5Q9Y5H7 936 aa5.9□□□□□ -1.46
PRPF40A-207ENST00000471701 F8W031 263 aaPredicted RBP5.89□□□□□ -1.47
PRPF40A-207ENST00000471701 TRIM13O60858 407 aa5.89□□□□□ -1.47
PRPF40A-207ENST00000471701 PPM1BO75688 479 aa5.89□□□□□ -1.47
PRPF40A-207ENST00000471701 MSL3P1P0C860 447 aa5.89□□□□□ -1.47
PRPF40A-207ENST00000471701 NLGN2Q8NFZ4 835 aa5.89□□□□□ -1.47
PRPF40A-207ENST00000471701 OR6P1Q8NGX9 317 aa5.89□□□□□ -1.47
PRPF40A-207ENST00000471701 CPLX3Q8WVH0 158 aa5.89□□□□□ -1.47
PRPF40A-207ENST00000471701 PHAXQ9H814 394 aaKnown RBP5.89□□□□□ -1.47
PRPF40A-207ENST00000471701 EPB41L4AQ9HCS5 686 aaPredicted RBP5.89□□□□□ -1.47
PRPF40A-207ENST00000471701 WHRNQ9P202 907 aa5.89□□□□□ -1.47
PRPF40A-207ENST00000471701 LTBP3Q9NS15 1303 aa5.89□□□□□ -1.47
PRPF40A-207ENST00000471701 FOXD2O60548 495 aaPredicted RBP5.88□□□□□ -1.47
PRPF40A-207ENST00000471701 DBHP09172 617 aa5.88□□□□□ -1.47
PRPF40A-207ENST00000471701 VAMP1P23763 118 aa5.88□□□□□ -1.47
PRPF40A-207ENST00000471701 CORO7P57737 925 aa5.88□□□□□ -1.47
PRPF40A-207ENST00000471701 SLC7A5Q01650 507 aa5.88□□□□□ -1.47
PRPF40A-207ENST00000471701 NFIXQ14938 502 aa5.88□□□□□ -1.47
PRPF40A-207ENST00000471701 PPP2R5EQ16537 467 aa5.88□□□□□ -1.47
PRPF40A-207ENST00000471701 ERICH6BQ5W0A0 696 aa5.88□□□□□ -1.47
PRPF40A-207ENST00000471701 EEF1DP3Q658K8 133 aa5.88□□□□□ -1.47
PRPF40A-207ENST00000471701 VAMP4O75379 141 aa5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 IFNGR1P15260 489 aa5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 ZNF200P98182 395 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 PLEKHN1Q494U1 663 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 CABP7Q86V35 215 aa5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 SP8Q8IXZ3 490 aa5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 ZDHHC14Q8IZN3 488 aa5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 LINC01356Q8N9X3 169 aa5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 ADCY4Q8NFM4 1077 aa5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 GPRASP2Q96D09 838 aa5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 HAUS7Q99871 368 aa5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 FAN1Q9Y2M0 1017 aa5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 SUGT1Q9Y2Z0 365 aa5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 IRS2Q9Y4H2 1338 aa5.87□□□□□ -1.47
PRPF40A-207ENST00000471701 A0A1W2PQH9 124 aa5.86□□□□□ -1.47
PRPF40A-207ENST00000471701 ZC3H12DA2A288 527 aaKnown RBP5.86□□□□□ -1.47
PRPF40A-207ENST00000471701 OTOL1A6NHN0 477 aaPredicted RBP5.86□□□□□ -1.47
PRPF40A-207ENST00000471701 SRGAP3O43295 1099 aa5.86□□□□□ -1.47
PRPF40A-207ENST00000471701 CBFA2T2O43439 604 aa5.86□□□□□ -1.47
PRPF40A-207ENST00000471701 TACR1P25103 407 aa5.86□□□□□ -1.47
PRPF40A-207ENST00000471701 BUD31P41223 144 aaPredicted RBP5.86□□□□□ -1.47
PRPF40A-207ENST00000471701 SOX9P48436 509 aa5.86□□□□□ -1.47
PRPF40A-207ENST00000471701 GIPRP48546 466 aa5.86□□□□□ -1.47
PRPF40A-207ENST00000471701 SEPHS1P49903 392 aa5.86□□□□□ -1.47
PRPF40A-207ENST00000471701 PRR5P85299 388 aa5.86□□□□□ -1.47
PRPF40A-207ENST00000471701 FGD4Q96M96 766 aa5.86□□□□□ -1.47
PRPF40A-207ENST00000471701 PCDHB10Q9UN67 800 aa5.86□□□□□ -1.47
PRPF40A-207ENST00000471701 A0A0G2JLL6 359 aaPredicted RBP5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 C2orf71A6NGG8 1288 aa5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 AURKAO14965 403 aa5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 NCAM1P13591 858 aa5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 SYN1P17600 705 aa5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 FOXO4P98177 505 aa5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 AMPD2Q01433 879 aa5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 DPY19L1Q2PZI1 675 aa5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 RCSD1Q6JBY9 416 aa5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 C19orf47Q8N9M1 422 aaKnown RBP5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 FEZF2Q8TBJ5 459 aa5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 RASGRP4Q8TDF6 673 aa5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 USP33Q8TEY7 942 aa5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 XYLT2Q9H1B5 865 aa5.85□□□□□ -1.47
PRPF40A-207ENST00000471701 TRBV23OR9-2A0A075B6M9 112 aa5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 RECKO95980 971 aa5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 EPHX1P07099 455 aa5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 PAMP19021 973 aa5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 LIMS1P48059 325 aa5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 KCNC1P48547 511 aa5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 RBM10P98175 930 aaKnown RBP5.84□□□□□ -1.47
PRPF40A-207ENST00000471701 C9orf131Q5VYM1 1079 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms