RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 NYAP1Q6ZVC0 841 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 TMC6Q7Z403 805 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 VSTM4Q8IW00 320 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 PDILTQ8N807 584 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 CCDC148Q8NFR7 591 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 DHX58Q96C10 678 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 CEP95Q96GE4 821 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 MTRQ99707 1265 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 ZMYND12Q9H0C1 365 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 TMX1Q9H3N1 280 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 DDX4Q9NQI0 724 aaKnown RBP7.29□□□□□ -1.24
SPEN-204ENST00000471538 FANCLQ9NW38 375 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 RNF181Q9P0P0 153 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 DACH1Q9UI36 760 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 BAZ2BQ9UIF8 2168 aaKnown RBP7.29□□□□□ -1.24
SPEN-204ENST00000471538 MYH8P13535 1937 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 USP27XA6NNY8 438 aa7.28□□□□□ -1.24
SPEN-204ENST00000471538 POTECB2RU33 542 aa7.28□□□□□ -1.24
SPEN-204ENST00000471538 KLRF2D3W0D1 207 aa7.28□□□□□ -1.24
SPEN-204ENST00000471538 CBFA2T2O43439 604 aa7.28□□□□□ -1.24
SPEN-204ENST00000471538 MCM7P33993 719 aa7.28□□□□□ -1.24
SPEN-204ENST00000471538 LONP1P36776 959 aaKnown RBP7.28□□□□□ -1.24
SPEN-204ENST00000471538 UBASH3AP57075 661 aa7.28□□□□□ -1.24
SPEN-204ENST00000471538 TBX2Q13207 712 aaPredicted RBP7.28□□□□□ -1.24
SPEN-204ENST00000471538 APTXQ7Z2E3 356 aaKnown RBP7.28□□□□□ -1.24
SPEN-204ENST00000471538 CCAR2Q8N163 923 aaKnown RBP7.28□□□□□ -1.24
SPEN-204ENST00000471538 RASGRP4Q8TDF6 673 aa7.28□□□□□ -1.24
SPEN-204ENST00000471538 MASTLQ96GX5 879 aa7.28□□□□□ -1.24
SPEN-204ENST00000471538 GSDMAQ96QA5 445 aa7.28□□□□□ -1.24
SPEN-204ENST00000471538 PYM1Q9BRP8 204 aaKnown RBP7.28□□□□□ -1.24
SPEN-204ENST00000471538 RIOX1Q9H6W3 641 aa7.28□□□□□ -1.24
SPEN-204ENST00000471538 STX8Q9UNK0 236 aa7.28□□□□□ -1.24
SPEN-204ENST00000471538 ESYT2A0FGR8 921 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 PPP1R3GB7ZBB8 358 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 TMEM232C9JQI7 657 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 PARP1P09874 1014 aaKnown RBP7.27□□□□□ -1.24
SPEN-204ENST00000471538 GOLGA8HP0CJ92 632 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 PDHBP11177 359 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 CASP1P29466 404 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 CHRNA5P30532 468 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 ALDH1B1P30837 517 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 PDE6BP35913 854 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 PRPHP41219 470 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 FKBP1AP62942 108 aaKnown RBP7.27□□□□□ -1.24
SPEN-204ENST00000471538 RASSF7Q02833 373 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 CDKAL1Q5VV42 579 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 E4F1Q66K89 784 aaPredicted RBP7.27□□□□□ -1.24
SPEN-204ENST00000471538 APOBEC3HQ6NTF7 200 aaKnown RBP7.27□□□□□ -1.24
SPEN-204ENST00000471538 USP17L2Q6R6M4 530 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 HHIPL2Q6UWX4 724 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 TRMT44Q8IYL2 757 aaKnown RBP7.27□□□□□ -1.24
SPEN-204ENST00000471538 SMC1BQ8NDV3 1235 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 CCDC34Q96HJ3 373 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 MXD3Q9BW11 206 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 ZC3H12CQ9C0D7 883 aaKnown RBP7.27□□□□□ -1.24
SPEN-204ENST00000471538 TMEM60Q9H2L4 133 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 CPVLQ9H3G5 476 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 MTMR4Q9NYA4 1195 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 NFE2L3Q9Y4A8 694 aa7.27□□□□□ -1.24
SPEN-204ENST00000471538 SCN9AQ15858 1988 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 TNRC18O15417 2968 aaPredicted RBP7.27□□□□□ -1.25
SPEN-204ENST00000471538 A0A1B0GTH6 734 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 CCDC194A0A1B0GVG4 234 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 USP17L5A8MUK1 530 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 hCG_1984214I3L0E3 225 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 LAD1O00515 517 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 CTIFO43310 598 aaKnown RBP7.27□□□□□ -1.25
SPEN-204ENST00000471538 GTPBP6O43824 516 aaPredicted RBP7.27□□□□□ -1.25
SPEN-204ENST00000471538 SERPINC1P01008 464 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 TNNT1P13805 278 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 AKR1B1P15121 316 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 SFPQP23246 707 aaKnown RBP eCLIP7.27□□□□□ -1.25
SPEN-204ENST00000471538 SHMT1P34896 483 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 AFMP43652 599 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 NAALADL2Q58DX5 795 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 SPATA1Q5VX52 437 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 CDC42EP5Q6NZY7 148 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 DPP8Q6V1X1 898 aaPredicted RBP7.27□□□□□ -1.25
SPEN-204ENST00000471538 HEATR3Q7Z4Q2 680 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 TMEM139Q8IV31 216 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 HS6ST3Q8IZP7 471 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 ZNF713Q8N859 430 aaPredicted RBP7.27□□□□□ -1.25
SPEN-204ENST00000471538 ZNF454Q8N9F8 522 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 IQUBQ8NA54 791 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 C16orf45Q96MC5 204 aaPredicted RBP7.27□□□□□ -1.25
SPEN-204ENST00000471538 MRIQ9BWK5 157 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 CCSER1Q9C0I3 900 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 EHD4Q9H223 541 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 SAMSN1Q9NSI8 373 aaKnown RBP7.27□□□□□ -1.25
SPEN-204ENST00000471538 PIM2Q9P1W9 311 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 SWAP70Q9UH65 585 aa7.27□□□□□ -1.25
SPEN-204ENST00000471538 TTF2Q9UNY4 1162 aaKnown RBP7.27□□□□□ -1.25
SPEN-204ENST00000471538 SLX4Q8IY92 1834 aa7.26□□□□□ -1.25
SPEN-204ENST00000471538 SYNRGQ9UMZ2 1314 aa7.26□□□□□ -1.25
SPEN-204ENST00000471538 PSME4Q14997 1843 aa7.26□□□□□ -1.25
SPEN-204ENST00000471538 LCE2BO14633 110 aa7.26□□□□□ -1.25
SPEN-204ENST00000471538 RRP9O43818 475 aaKnown RBP7.26□□□□□ -1.25
SPEN-204ENST00000471538 EDIL3O43854 480 aa7.26□□□□□ -1.25
SPEN-204ENST00000471538 PBX1P40424 430 aa7.26□□□□□ -1.25
SPEN-204ENST00000471538 NAPAP54920 295 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms