RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 F5H6K3 240 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 PI4K2BG5E9Z4 385 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 IGSF3O75054 1194 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 NDUFB10O96000 172 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 CT47B1P0C2W7 299 aaPredicted RBP8.24□□□□□ -1.09
HDAC1-204ENST00000471488 ALAS1P13196 640 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 SMPD1P17405 629 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 SNAP25P60880 206 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 KLRC3Q07444 240 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 POLA2Q14181 598 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 KIAA1211Q6ZU35 1233 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 ZNF467Q7Z7K2 595 aaPredicted RBP8.24□□□□□ -1.09
HDAC1-204ENST00000471488 FTSJ3Q8IY81 847 aaKnown RBP8.24□□□□□ -1.09
HDAC1-204ENST00000471488 LRRC47Q8N1G4 583 aaKnown RBP8.24□□□□□ -1.09
HDAC1-204ENST00000471488 SSH3Q8TE77 659 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 ARHGAP45Q92619 1136 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 AGBL1Q96MI9 1066 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 ALDH8A1Q9H2A2 487 aaPredicted RBP8.24□□□□□ -1.09
HDAC1-204ENST00000471488 MTMR7Q9Y216 660 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 NCOR1O75376 2440 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 MCM3APO60318 1980 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 GRIN2DO15399 1336 aa8.24□□□□□ -1.09
HDAC1-204ENST00000471488 LCHNA4D1U4 455 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 ASB14A6NK59 587 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 CTAGE5O15320 804 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 CSPG5O95196 566 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 PFKMP08237 780 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 IFIT2P09913 472 aaKnown RBP8.23□□□□□ -1.09
HDAC1-204ENST00000471488 SUPT20HL2P0C7V6 817 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 ALADP13716 330 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 IL9P15248 144 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 NHLH1Q02575 133 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 TMEM63BQ5T3F8 832 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 C12orf60Q5U649 245 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 PTCRAQ6ISU1 281 aaPredicted RBP8.23□□□□□ -1.09
HDAC1-204ENST00000471488 NSMFQ6X4W1 530 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 C16orf86Q6ZW13 317 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 CHST13Q8NET6 341 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 FGD4Q96M96 766 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 FBXL18Q96ME1 805 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 UBE2ZQ9H832 354 aaPredicted RBP8.23□□□□□ -1.09
HDAC1-204ENST00000471488 ACAD9Q9H845 621 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 ATP8A2Q9NTI2 1148 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 RNF146Q9NTX7 359 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 PARP14Q460N5 1801 aa8.23□□□□□ -1.09
HDAC1-204ENST00000471488 BAZ2AQ9UIF9 1905 aaKnown RBP8.23□□□□□ -1.09
HDAC1-204ENST00000471488 TMEM232C9JQI7 657 aa8.22□□□□□ -1.09
HDAC1-204ENST00000471488 H3BQ06 376 aaPredicted RBP8.22□□□□□ -1.09
HDAC1-204ENST00000471488 RBAK-RBAKDNI3L0D1 243 aa8.22□□□□□ -1.09
HDAC1-204ENST00000471488 PRDM1O75626 825 aa8.22□□□□□ -1.09
HDAC1-204ENST00000471488 CTR9Q6PD62 1173 aa8.22□□□□□ -1.09
HDAC1-204ENST00000471488 ERC1Q8IUD2 1116 aa8.22□□□□□ -1.09
HDAC1-204ENST00000471488 SLC43A3Q8NBI5 491 aa8.22□□□□□ -1.09
HDAC1-204ENST00000471488 OR6J1Q8NGC5 347 aa8.22□□□□□ -1.09
HDAC1-204ENST00000471488 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.22□□□□□ -1.09
HDAC1-204ENST00000471488 TRERF1Q96PN7 1200 aa8.22□□□□□ -1.09
HDAC1-204ENST00000471488 PURBQ96QR8 312 aaKnown RBP8.22□□□□□ -1.09
HDAC1-204ENST00000471488 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.22□□□□□ -1.097e-7■■■□□ 15
HDAC1-204ENST00000471488 BOLA2Q9H3K6 86 aa8.22□□□□□ -1.09
HDAC1-204ENST00000471488 POLR3EQ9NVU0 708 aa8.22□□□□□ -1.09
HDAC1-204ENST00000471488 FEM1BQ9UK73 627 aa8.22□□□□□ -1.09
HDAC1-204ENST00000471488 GNEQ9Y223 722 aaKnown RBP8.22□□□□□ -1.09
HDAC1-204ENST00000471488 SCN5AQ14524 2016 aa8.22□□□□□ -1.09
HDAC1-204ENST00000471488 MUC6Q6W4X9 2439 aa8.21□□□□□ -1.09
HDAC1-204ENST00000471488 TCRBV5S4A2TA0A5A2 114 aa8.21□□□□□ -1.1
HDAC1-204ENST00000471488 SOWAHBA6NEL2 793 aa8.21□□□□□ -1.1
HDAC1-204ENST00000471488 CHGBP05060 677 aa8.21□□□□□ -1.1
HDAC1-204ENST00000471488 APPP05067 770 aa8.21□□□□□ -1.1
HDAC1-204ENST00000471488 POU3F3P20264 500 aaPredicted RBP8.21□□□□□ -1.1
HDAC1-204ENST00000471488 NBPF20Q3BBV1 942 aa8.21□□□□□ -1.1
HDAC1-204ENST00000471488 BRDTQ58F21 947 aaPredicted RBP8.21□□□□□ -1.1
HDAC1-204ENST00000471488 ZKSCAN2Q63HK3 967 aa8.21□□□□□ -1.1
HDAC1-204ENST00000471488 IQSEC1Q6DN90 963 aa8.21□□□□□ -1.1
HDAC1-204ENST00000471488 TMED8Q6PL24 325 aaPredicted RBP8.21□□□□□ -1.1
HDAC1-204ENST00000471488 FAM178BQ8IXR5 827 aa8.21□□□□□ -1.1
HDAC1-204ENST00000471488 ZNF444Q8N0Y2 327 aaPredicted RBP8.21□□□□□ -1.1
HDAC1-204ENST00000471488 CLASRPQ8N2M8 674 aaKnown RBP8.21□□□□□ -1.1
HDAC1-204ENST00000471488 PHOSPHO2Q8TCD6 241 aa8.21□□□□□ -1.1
HDAC1-204ENST00000471488 ANKS1AQ92625 1134 aa8.21□□□□□ -1.1
HDAC1-204ENST00000471488 MTG1Q9BT17 334 aaPredicted RBP8.21□□□□□ -1.1
HDAC1-204ENST00000471488 KATNBL1Q9H079 304 aa8.21□□□□□ -1.1
HDAC1-204ENST00000471488 SLC38A10Q9HBR0 1119 aa8.21□□□□□ -1.1
HDAC1-204ENST00000471488 A1CFQ9NQ94 594 aaKnown RBP8.21□□□□□ -1.1
HDAC1-204ENST00000471488 PAG1Q9NWQ8 432 aa8.21□□□□□ -1.1
HDAC1-204ENST00000471488 COL4A4P53420 1690 aaPredicted RBP8.21□□□□□ -1.1
HDAC1-204ENST00000471488 DCXO43602 365 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 LPXNO60711 386 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 IQCF3P0C7M6 154 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 BMP3P12645 472 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 RASA1P20936 1047 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 RFC2P35250 354 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 ADD2P35612 726 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 TDO2P48775 406 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 CPT1AP50416 773 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 STAT2P52630 851 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 DEFB103AP81534 67 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 BFSP2Q13515 415 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 CLUL1Q15846 466 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 SLFN13Q68D06 897 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 FAM133AQ8N9E0 248 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms