RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 PLXNA1Q9UIW2 1896 aa20.6■□□□□ 0.89
VPS72-204ENST00000471423 MYH6P13533 1939 aa20.59■□□□□ 0.89
VPS72-204ENST00000471423 NFIBO00712 420 aa20.59■□□□□ 0.89
VPS72-204ENST00000471423 ZBTB5O15062 677 aa20.59■□□□□ 0.89
VPS72-204ENST00000471423 ZNF792Q3KQV3 632 aa20.59■□□□□ 0.89
VPS72-204ENST00000471423 FBXO11Q86XK2 927 aa20.59■□□□□ 0.89
VPS72-204ENST00000471423 CMTR1Q8N1G2 835 aaKnown RBP20.59■□□□□ 0.89
VPS72-204ENST00000471423 FBXL16Q8N461 479 aa20.59■□□□□ 0.89
VPS72-204ENST00000471423 MAML3Q96JK9 1138 aa20.59■□□□□ 0.89
VPS72-204ENST00000471423 PIGSQ96S52 555 aa20.59■□□□□ 0.89
VPS72-204ENST00000471423 SPZ1Q9BXG8 430 aa20.59■□□□□ 0.89
VPS72-204ENST00000471423 DNAJC25-GNG10A0A024R161 153 aa20.58■□□□□ 0.89
VPS72-204ENST00000471423 GOLGA8AA7E2F4 631 aa20.58■□□□□ 0.89
VPS72-204ENST00000471423 GOLGA8BA8MQT2 603 aa20.58■□□□□ 0.89
VPS72-204ENST00000471423 PPP1R11O60927 126 aaPredicted RBP20.58■□□□□ 0.89
VPS72-204ENST00000471423 CCL5P13501 91 aa20.58■□□□□ 0.89
VPS72-204ENST00000471423 PRKAR2AP13861 404 aaKnown RBP20.58■□□□□ 0.89
VPS72-204ENST00000471423 GNAQP50148 359 aa20.58■□□□□ 0.89
VPS72-204ENST00000471423 SOX10P56693 466 aa20.58■□□□□ 0.89
VPS72-204ENST00000471423 OLFML2BQ68BL8 750 aa20.58■□□□□ 0.89
VPS72-204ENST00000471423 NSMFQ6X4W1 530 aa20.58■□□□□ 0.89
VPS72-204ENST00000471423 SRBD1Q8N5C6 995 aaKnown RBP20.58■□□□□ 0.89
VPS72-204ENST00000471423 CLEC4DQ8WXI8 215 aa20.58■□□□□ 0.89
VPS72-204ENST00000471423 PIBF1Q8WXW3 757 aa20.58■□□□□ 0.89
VPS72-204ENST00000471423 LZTS2Q9BRK4 669 aa20.58■□□□□ 0.89
VPS72-204ENST00000471423 UNC93B1Q9H1C4 597 aa20.58■□□□□ 0.89
VPS72-204ENST00000471423 PFASO15067 1338 aa20.57■□□□□ 0.88
VPS72-204ENST00000471423 ABCB11O95342 1321 aa20.57■□□□□ 0.88
VPS72-204ENST00000471423 CYP2C19P33261 490 aa20.57■□□□□ 0.88
VPS72-204ENST00000471423 TOB2Q14106 344 aaPredicted RBP20.57■□□□□ 0.88
VPS72-204ENST00000471423 RTN1Q16799 776 aa20.57■□□□□ 0.88
VPS72-204ENST00000471423 MFSD14CQ5VZR4 134 aa20.57■□□□□ 0.88
VPS72-204ENST00000471423 TMTC3Q6ZXV5 915 aa20.57■□□□□ 0.88
VPS72-204ENST00000471423 AMNQ9BXJ7 453 aa20.57■□□□□ 0.88
VPS72-204ENST00000471423 CYP39A1Q9NYL5 469 aa20.57■□□□□ 0.88
VPS72-204ENST00000471423 BAZ2BQ9UIF8 2168 aaKnown RBP20.57■□□□□ 0.88
VPS72-204ENST00000471423 POTEB2H3BUK9 544 aa20.56■□□□□ 0.88
VPS72-204ENST00000471423 IGHA2P01877 340 aa20.56■□□□□ 0.88
VPS72-204ENST00000471423 METAP2P50579 478 aaKnown RBP eCLIP20.56■□□□□ 0.88
VPS72-204ENST00000471423 RCAN1P53805 252 aa20.56■□□□□ 0.88
VPS72-204ENST00000471423 CNTN2Q02246 1040 aa20.56■□□□□ 0.88
VPS72-204ENST00000471423 CACNB2Q08289 660 aaPredicted RBP20.56■□□□□ 0.88
VPS72-204ENST00000471423 MAP3K21Q5TCX8 1036 aa20.56■□□□□ 0.88
VPS72-204ENST00000471423 IL17RAQ96F46 866 aa20.56■□□□□ 0.88
VPS72-204ENST00000471423 FGD4Q96M96 766 aa20.56■□□□□ 0.88
VPS72-204ENST00000471423 RNF208Q9H0X6 261 aa20.56■□□□□ 0.88
VPS72-204ENST00000471423 PDRG1Q9NUG6 133 aa20.56■□□□□ 0.88
VPS72-204ENST00000471423 RBM28Q9NW13 759 aaKnown RBP20.56■□□□□ 0.88
VPS72-204ENST00000471423 DIS3Q9Y2L1 958 aaKnown RBP20.56■□□□□ 0.88
VPS72-204ENST00000471423 RBBP6Q7Z6E9 1792 aaKnown RBP20.56■□□□□ 0.88
VPS72-204ENST00000471423 PNMA6FA0A0J9YX94 578 aa20.55■□□□□ 0.88
VPS72-204ENST00000471423 PTPDC1A2A3K4 754 aa20.55■□□□□ 0.88
VPS72-204ENST00000471423 SMARCA1P28370 1054 aa20.55■□□□□ 0.88
VPS72-204ENST00000471423 BAATQ14032 418 aaPredicted RBP20.55■□□□□ 0.88
VPS72-204ENST00000471423 SLC30A10Q6XR72 485 aa20.55■□□□□ 0.88
VPS72-204ENST00000471423 CCDC82Q8N4S0 544 aa20.55■□□□□ 0.88
VPS72-204ENST00000471423 FAM133AQ8N9E0 248 aa20.55■□□□□ 0.88
VPS72-204ENST00000471423 RRP36Q96EU6 259 aaKnown RBP20.55■□□□□ 0.88
VPS72-204ENST00000471423 TMEM106CQ9BVX2 250 aa20.55■□□□□ 0.88
VPS72-204ENST00000471423 LCTP09848 1927 aa20.55■□□□□ 0.88
VPS72-204ENST00000471423 RPTORQ8N122 1335 aa20.54■□□□□ 0.88
VPS72-204ENST00000471423 POTEFA5A3E0 1075 aa20.54■□□□□ 0.88
VPS72-204ENST00000471423 CDC27P30260 824 aa20.54■□□□□ 0.88
VPS72-204ENST00000471423 TINF2Q9BSI4 451 aa20.54■□□□□ 0.88
VPS72-204ENST00000471423 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.54■□□□□ 0.88
VPS72-204ENST00000471423 HMX1Q9NP08 348 aaPredicted RBP20.54■□□□□ 0.88
VPS72-204ENST00000471423 FAM217BQ9NTX9 383 aaPredicted RBP20.54■□□□□ 0.88
VPS72-204ENST00000471423 SEC63Q9UGP8 760 aaKnown RBP20.54■□□□□ 0.88
VPS72-204ENST00000471423 MRPL11Q9Y3B7 192 aaKnown RBP20.54■□□□□ 0.88
VPS72-204ENST00000471423 PCDHA1Q9Y5I3 950 aa20.54■□□□□ 0.88
VPS72-204ENST00000471423 NID2Q14112 1375 aa20.54■□□□□ 0.88
VPS72-204ENST00000471423 CNTNAP5Q8WYK1 1306 aa20.53■□□□□ 0.88
VPS72-204ENST00000471423 hCG_1642624A0A1W2PR95 340 aa20.53■□□□□ 0.88
VPS72-204ENST00000471423 CALML3P27482 149 aa20.53■□□□□ 0.88
VPS72-204ENST00000471423 RNF207Q6ZRF8 634 aa20.53■□□□□ 0.88
VPS72-204ENST00000471423 PURBQ96QR8 312 aaKnown RBP20.53■□□□□ 0.88
VPS72-204ENST00000471423 LARP6Q9BRS8 491 aaKnown RBP20.53■□□□□ 0.88
VPS72-204ENST00000471423 PAK6Q9NQU5 681 aaPredicted RBP20.53■□□□□ 0.88
VPS72-204ENST00000471423 ASTN1O14525 1302 aa20.53■□□□□ 0.88
VPS72-204ENST00000471423 SOWAHBA6NEL2 793 aa20.52■□□□□ 0.88
VPS72-204ENST00000471423 CYBAP13498 195 aa20.52■□□□□ 0.88
VPS72-204ENST00000471423 PDIA3P30101 505 aaKnown RBP20.52■□□□□ 0.88
VPS72-204ENST00000471423 CCND3P30281 292 aaPredicted RBP20.52■□□□□ 0.88
VPS72-204ENST00000471423 EVCP57679 992 aa20.52■□□□□ 0.88
VPS72-204ENST00000471423 RPS6P62753 249 aaKnown RBP20.52■□□□□ 0.88
VPS72-204ENST00000471423 IFFO2Q5TF58 517 aa20.52■□□□□ 0.88
VPS72-204ENST00000471423 ZNF467Q7Z7K2 595 aaPredicted RBP20.52■□□□□ 0.88
VPS72-204ENST00000471423 C22orf23Q9BZE7 217 aa20.52■□□□□ 0.88
VPS72-204ENST00000471423 KIAA0100Q14667 2235 aaKnown RBP20.51■□□□□ 0.87
VPS72-204ENST00000471423 OPLAHO14841 1288 aa20.51■□□□□ 0.87
VPS72-204ENST00000471423 GJB1P08034 283 aa20.51■□□□□ 0.87
VPS72-204ENST00000471423 ADD1P35611 737 aaKnown RBP20.51■□□□□ 0.87
VPS72-204ENST00000471423 FUT2Q10981 343 aa20.51■□□□□ 0.87
VPS72-204ENST00000471423 TRAF1Q13077 416 aa20.51■□□□□ 0.87
VPS72-204ENST00000471423 PPP2R5BQ15173 497 aa20.51■□□□□ 0.87
VPS72-204ENST00000471423 MAMDC4Q6UXC1 1216 aa20.51■□□□□ 0.87
VPS72-204ENST00000471423 MCF2L2Q86YR7 1114 aa20.51■□□□□ 0.87
VPS72-204ENST00000471423 RGS22Q8NE09 1264 aa20.51■□□□□ 0.87
VPS72-204ENST00000471423 TRPV1Q8NER1 839 aa20.51■□□□□ 0.87
VPS72-204ENST00000471423 TBC1D5Q92609 795 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms