RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 BMP8BP34820 402 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 KIR2DL1P43626 348 aaPredicted RBP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 KIR2DL2P43627 348 aaPredicted RBP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 GJA8P48165 433 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 SOX9P48436 509 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 AUHQ13825 339 aaKnown RBP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 COL9A2Q14055 689 aaPredicted RBP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 AXDND1Q5T1B0 1012 aaPredicted RBP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 C9orf131Q5VYM1 1079 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 DCAF15Q66K64 600 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 INTS3Q68E01 1043 aaKnown RBP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 CNKSR3Q6P9H4 555 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 RUFY4Q6ZNE9 571 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 CEP128Q6ZU80 1094 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 FAM129CQ86XR2 697 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 SPPL2CQ8IUH8 684 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 C7orf61Q8IZ16 206 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 RBBP8NLQ8NC74 664 aaPredicted RBP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 RASGRP4Q8TDF6 673 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 SMARCC1Q92922 1105 aaPredicted RBP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 SHISA4Q96DD7 197 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 HHIPL1Q96JK4 782 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 FCRL2Q96LA5 508 aaPredicted RBP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 DHRS1Q96LJ7 313 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 RBM15Q96T37 977 aaKnown RBP eCLIP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 DSCC1Q9BVC3 393 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 CWC22Q9HCG8 908 aaKnown RBP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 FAM86C1Q9NVL1 165 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 ERVK13-1Q9NX77 482 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 PRR13Q9NZ81 148 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 ZMYM5Q9UJ78 669 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 EFR3BQ9Y2G0 817 aa2.47□□□□□ -2.01
UBXN4-207ENST00000471246 GPR55Q9Y2T6 319 aaPredicted RBP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 YBX2Q9Y2T7 364 aaKnown RBP2.47□□□□□ -2.01
UBXN4-207ENST00000471246 H0Y8X5 98 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 N4BP3O15049 544 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 NRDCO43847 1150 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 TP53P04637 393 aaPredicted RBP2.46□□□□□ -2.02
UBXN4-207ENST00000471246 GSNP06396 782 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 ENDOUP21128 410 aaKnown RBP2.46□□□□□ -2.02
UBXN4-207ENST00000471246 PDE6BP35913 854 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 KCNC1P48547 511 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 SLURP1P55000 103 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 SNX17Q15036 470 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 SMN1Q16637 294 aaKnown RBP2.46□□□□□ -2.02
UBXN4-207ENST00000471246 ADGRF1Q5T601 910 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 UNC5AQ6ZN44 842 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 NLRX1Q86UT6 975 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 RGS22Q8NE09 1264 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 SPATA32Q96LK8 384 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 C8orf49Q96NF6 230 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 PLCD4Q9BRC7 762 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 CDADC1Q9BWV3 514 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 SRRTQ9BXP5 876 aaKnown RBP2.46□□□□□ -2.02
UBXN4-207ENST00000471246 GP6Q9HCN6 339 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 DLL4Q9NR61 685 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 AP5S1Q9NUS5 200 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.46□□□□□ -2.02
UBXN4-207ENST00000471246 TAF6LQ9Y6J9 622 aa2.46□□□□□ -2.02
UBXN4-207ENST00000471246 LTBP3Q9NS15 1303 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 OR14I1A6ND48 311 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 FADS2P1A8MWK0 482 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 CBFA2T2O43439 604 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 ITGA4P13612 1032 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 VAV1P15498 845 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 GIPRP48546 466 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 NASPP49321 788 aaPredicted RBP2.45□□□□□ -2.02
UBXN4-207ENST00000471246 CEBPAP49715 358 aaPredicted RBP2.45□□□□□ -2.02
UBXN4-207ENST00000471246 EIF6P56537 245 aaKnown RBP2.45□□□□□ -2.02
UBXN4-207ENST00000471246 RTP1P59025 263 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 ZNF445P59923 1031 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 SRSF3P84103 164 aaKnown RBP2.45□□□□□ -2.02
UBXN4-207ENST00000471246 KIR3DS1Q14943 382 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 SLC14A2Q15849 920 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 HSF5Q4G112 596 aaPredicted RBP2.45□□□□□ -2.02
UBXN4-207ENST00000471246 RTP2Q5QGT7 225 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 CWF19L1Q69YN2 538 aaKnown RBP2.45□□□□□ -2.02
UBXN4-207ENST00000471246 USP51Q70EK9 711 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 SLCO6A1Q86UG4 719 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 SIRT2Q8IXJ6 389 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 FIBCD1Q8N539 461 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 NAT16Q8N8M0 369 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 C19orf47Q8N9M1 422 aaKnown RBP2.45□□□□□ -2.02
UBXN4-207ENST00000471246 OR6P1Q8NGX9 317 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 SH3RF3Q8TEJ3 882 aaPredicted RBP2.45□□□□□ -2.02
UBXN4-207ENST00000471246 BRF1Q92994 677 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 SHDQ96IW2 340 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 CRBNQ96SW2 442 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 HAUS7Q99871 368 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 ZNF747Q9BV97 191 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 TGIF2Q9GZN2 237 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 ACBD3Q9H3P7 528 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 NOL6Q9H6R4 1146 aaKnown RBP2.45□□□□□ -2.02
UBXN4-207ENST00000471246 CCSER2Q9H7U1 834 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 PHAXQ9H814 394 aaKnown RBP2.45□□□□□ -2.02
UBXN4-207ENST00000471246 CNTD2Q9H8S5 307 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 TNFRSF10DQ9UBN6 386 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 ZNF214Q9UL59 606 aaPredicted RBP2.45□□□□□ -2.02
UBXN4-207ENST00000471246 ZNF451Q9Y4E5 1061 aa2.45□□□□□ -2.02
UBXN4-207ENST00000471246 FHOD1Q9Y613 1164 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms