RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 LPIN2Q92539 896 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 SPATC1LQ9H0A9 340 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 RPAP3Q9H6T3 665 aaPredicted RBP7.22□□□□□ -1.25
VARS-222ENST00000470953 INCENPQ9NQS7 918 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 C9orf78Q9NZ63 289 aaPredicted RBP7.22□□□□□ -1.25
VARS-222ENST00000470953 ANKFY1Q9P2R3 1169 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 ABCF2Q9UG63 623 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 HERC5Q9UII4 1024 aaKnown RBP7.22□□□□□ -1.25
VARS-222ENST00000470953 TET1Q8NFU7 2136 aa7.21□□□□□ -1.25
VARS-222ENST00000470953 VAMP4O75379 141 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 EYA4O95677 639 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 GH2P01242 217 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 CST5P28325 142 aaPredicted RBP7.21□□□□□ -1.26
VARS-222ENST00000470953 RBM25P49756 843 aaKnown RBP7.21□□□□□ -1.26
VARS-222ENST00000470953 RRP1P56182 461 aaKnown RBP7.21□□□□□ -1.26
VARS-222ENST00000470953 WDR5P61964 334 aaKnown RBP7.21□□□□□ -1.26
VARS-222ENST00000470953 LMNB2Q03252 620 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 RASGRF1Q13972 1273 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 ATG9AQ7Z3C6 839 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 METTL16Q86W50 562 aaKnown RBP7.21□□□□□ -1.26
VARS-222ENST00000470953 DTWD2Q8NBA8 298 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 SLC43A3Q8NBI5 491 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 SH3RF3Q8TEJ3 882 aaPredicted RBP7.21□□□□□ -1.26
VARS-222ENST00000470953 RIN2Q8WYP3 895 aaPredicted RBP7.21□□□□□ -1.26
VARS-222ENST00000470953 MSLNLQ96KJ4 702 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 TINF2Q9BSI4 451 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 SMC4Q9NTJ3 1288 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 PI4KBQ9UBF8 816 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 NRBP1Q9UHY1 535 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 DENND2AQ9ULE3 1009 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 FANCMQ8IYD8 2048 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 GRIN2DO15399 1336 aa7.21□□□□□ -1.26
VARS-222ENST00000470953 CTAGE5O15320 804 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 NCK2O43639 380 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 BRD1O95696 1058 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 C6orf222P0C671 652 aaPredicted RBP7.2□□□□□ -1.26
VARS-222ENST00000470953 KCNJ6P48051 423 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 RFX5P48382 616 aaPredicted RBP7.2□□□□□ -1.26
VARS-222ENST00000470953 PLS1Q14651 629 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 ZNF792Q3KQV3 632 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 N4BP2L1Q5TBK1 243 aaPredicted RBP7.2□□□□□ -1.26
VARS-222ENST00000470953 NCAPG2Q86XI2 1143 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 ZGPATQ8N5A5 531 aaKnown RBP7.2□□□□□ -1.26
VARS-222ENST00000470953 KREMEN2Q8NCW0 462 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 FLCNQ8NFG4 579 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 BBC3Q96PG8 261 aaPredicted RBP7.2□□□□□ -1.26
VARS-222ENST00000470953 RAD9AQ99638 391 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 FEZ1Q99689 392 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 PHF7Q9BWX1 381 aaPredicted RBP7.2□□□□□ -1.26
VARS-222ENST00000470953 FTOQ9C0B1 505 aaKnown RBP eCLIP7.2□□□□□ -1.26
VARS-222ENST00000470953 MFSD1Q9H3U5 465 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 NCDNQ9UBB6 729 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 PALD1Q9ULE6 856 aa7.2□□□□□ -1.26
VARS-222ENST00000470953 EYA2O00167 538 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 GJB5O95377 273 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 SNAI1O95863 264 aaPredicted RBP7.19□□□□□ -1.26
VARS-222ENST00000470953 CYP2C9P11712 490 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 PTGS1P23219 599 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 HNRNPUQ00839 825 aaKnown RBP eCLIP7.19□□□□□ -1.26
VARS-222ENST00000470953 BEX3Q00994 111 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 GPM6BQ13491 265 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 ATP2B3Q16720 1220 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 EPC2Q52LR7 807 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 KIAA1755Q5JYT7 1200 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 CCDC102BQ68D86 513 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 FAM117BQ6P1L5 589 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 PI16Q6UXB8 463 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 TBC1D9Q6ZT07 1266 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 MAPKAPK5Q8IW41 473 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 TEX11Q8IYF3 940 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 ABRAQ8N0Z2 381 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 PCSK9Q8NBP7 692 aaKnown RBP7.19□□□□□ -1.26
VARS-222ENST00000470953 SMRP1Q8NCR6 262 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 SHCBP1Q8NEM2 672 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 NSUN4Q96CB9 384 aaKnown RBP7.19□□□□□ -1.26
VARS-222ENST00000470953 CRBNQ96SW2 442 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 SRCIN1Q9C0H9 1055 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 KIAA1683Q9H0B3 1180 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 IGFLR1Q9H665 355 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 GNL3LQ9NVN8 582 aaKnown RBP7.19□□□□□ -1.26
VARS-222ENST00000470953 SLC5A4Q9NY91 659 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 USP15Q9Y4E8 981 aaPredicted RBP7.19□□□□□ -1.26
VARS-222ENST00000470953 PTPRCP08575 1304 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 TANC1Q9C0D5 1861 aa7.19□□□□□ -1.26
VARS-222ENST00000470953 DMXL2Q8TDJ6 3036 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 H3BNC9 293 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 SLC30A4O14863 429 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 SEMA3EO15041 775 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 BAIAP3O94812 1187 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 FCER1AP12319 257 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 AOC1P19801 751 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 TGM1P22735 817 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 NDUFV1P49821 464 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 SLFN5Q08AF3 891 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 COG2Q14746 738 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 RAB3GAP1Q15042 981 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 GNASQ5JWF2 1037 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 VARS2Q5ST30 1063 aaKnown RBP7.18□□□□□ -1.26
VARS-222ENST00000470953 CXCL17Q6UXB2 119 aa7.18□□□□□ -1.26
VARS-222ENST00000470953 FOXP4Q8IVH2 680 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms