RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 IL23AQ9NPF7 189 aa16.43■□□□□ 0.22
SEMA3F-208ENST00000470737 ZBTB47Q9UFB7 747 aaPredicted RBP16.43■□□□□ 0.22
SEMA3F-208ENST00000470737 VCANP13611 3396 aa16.43■□□□□ 0.22
SEMA3F-208ENST00000470737 SOWAHBA6NEL2 793 aa16.42■□□□□ 0.22
SEMA3F-208ENST00000470737 CYP2C18P33260 490 aa16.42■□□□□ 0.22
SEMA3F-208ENST00000470737 NKX3-2P78367 333 aa16.42■□□□□ 0.22
SEMA3F-208ENST00000470737 TJAP1Q5JTD0 557 aa16.42■□□□□ 0.22
SEMA3F-208ENST00000470737 ZMYM1Q5SVZ6 1142 aa16.42■□□□□ 0.22
SEMA3F-208ENST00000470737 RCSD1Q6JBY9 416 aa16.42■□□□□ 0.22
SEMA3F-208ENST00000470737 CXCL17Q6UXB2 119 aa16.42■□□□□ 0.22
SEMA3F-208ENST00000470737 KCTD1Q719H9 257 aa16.42■□□□□ 0.22
SEMA3F-208ENST00000470737 C16orf59Q7L2K0 433 aa16.42■□□□□ 0.22
SEMA3F-208ENST00000470737 HIPK3Q9H422 1215 aa16.42■□□□□ 0.22
SEMA3F-208ENST00000470737 MTMR7Q9Y216 660 aa16.42■□□□□ 0.22
SEMA3F-208ENST00000470737 ZNF536O15090 1300 aa16.42■□□□□ 0.22
SEMA3F-208ENST00000470737 LRRC37A2A6NM11 1700 aa16.42■□□□□ 0.22
SEMA3F-208ENST00000470737 GRXCR1A8MXD5 290 aa16.41■□□□□ 0.22
SEMA3F-208ENST00000470737 CTAGE5O15320 804 aa16.41■□□□□ 0.22
SEMA3F-208ENST00000470737 DYNC1LI2O43237 492 aaPredicted RBP16.41■□□□□ 0.22
SEMA3F-208ENST00000470737 CD4P01730 458 aa16.41■□□□□ 0.22
SEMA3F-208ENST00000470737 FGBP02675 491 aa16.41■□□□□ 0.22
SEMA3F-208ENST00000470737 PBX2P40425 430 aa16.41■□□□□ 0.22
SEMA3F-208ENST00000470737 ITGA7Q13683 1181 aa16.41■□□□□ 0.22
SEMA3F-208ENST00000470737 CCDC96Q2M329 555 aa16.41■□□□□ 0.22
SEMA3F-208ENST00000470737 RASIP1Q5U651 963 aa16.41■□□□□ 0.22
SEMA3F-208ENST00000470737 IQSEC1Q6DN90 963 aa16.41■□□□□ 0.22
SEMA3F-208ENST00000470737 NSMFQ6X4W1 530 aa16.41■□□□□ 0.22
SEMA3F-208ENST00000470737 CCPG1Q9ULG6 757 aa16.41■□□□□ 0.22
SEMA3F-208ENST00000470737 GNEQ9Y223 722 aaKnown RBP16.41■□□□□ 0.22
SEMA3F-208ENST00000470737 RANBP6O60518 1105 aaKnown RBP16.4■□□□□ 0.22
SEMA3F-208ENST00000470737 CTDSPL2Q05D32 466 aa16.4■□□□□ 0.22
SEMA3F-208ENST00000470737 EEPD1Q7L9B9 569 aa16.4■□□□□ 0.22
SEMA3F-208ENST00000470737 USP38Q8NB14 1042 aa16.4■□□□□ 0.22
SEMA3F-208ENST00000470737 SLC43A3Q8NBI5 491 aa16.4■□□□□ 0.22
SEMA3F-208ENST00000470737 PI4K2BQ8TCG2 481 aa16.4■□□□□ 0.22
SEMA3F-208ENST00000470737 PPM1EQ8WY54 764 aa16.4■□□□□ 0.22
SEMA3F-208ENST00000470737 HERVK_113Q902F9 699 aa16.4■□□□□ 0.22
SEMA3F-208ENST00000470737 PRDM12Q9H4Q4 367 aa16.4■□□□□ 0.22
SEMA3F-208ENST00000470737 VTA1Q9NP79 307 aa16.4■□□□□ 0.22
SEMA3F-208ENST00000470737 PRR12Q9ULL5 1215 aa16.4■□□□□ 0.22
SEMA3F-208ENST00000470737 Q9Y3F1 56 aa16.4■□□□□ 0.22
SEMA3F-208ENST00000470737 ASTN1O14525 1302 aa16.4■□□□□ 0.22
SEMA3F-208ENST00000470737 SMPD1P17405 629 aa16.39■□□□□ 0.21
SEMA3F-208ENST00000470737 MX1P20591 662 aa16.39■□□□□ 0.21
SEMA3F-208ENST00000470737 SNAP25P60880 206 aa16.39■□□□□ 0.21
SEMA3F-208ENST00000470737 MUM1L1Q5H9M0 696 aa16.39■□□□□ 0.21
SEMA3F-208ENST00000470737 FBXO16Q8IX29 292 aaPredicted RBP16.39■□□□□ 0.21
SEMA3F-208ENST00000470737 RPUSD2Q8IZ73 545 aaKnown RBP16.39■□□□□ 0.21
SEMA3F-208ENST00000470737 DCAF4Q8WV16 495 aa16.39■□□□□ 0.21
SEMA3F-208ENST00000470737 PRDM6Q9NQX0 595 aa16.39■□□□□ 0.21
SEMA3F-208ENST00000470737 TOMM22Q9NS69 142 aa16.39■□□□□ 0.21
SEMA3F-208ENST00000470737 CYP39A1Q9NYL5 469 aa16.39■□□□□ 0.21
SEMA3F-208ENST00000470737 ADD3Q9UEY8 706 aaKnown RBP16.39■□□□□ 0.21
SEMA3F-208ENST00000470737 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
SEMA3F-208ENST00000470737 GBF1Q92538 1859 aa16.39■□□□□ 0.21
SEMA3F-208ENST00000470737 ICAM1P05362 532 aa16.38■□□□□ 0.21
SEMA3F-208ENST00000470737 AKNAD1Q5T1N1 836 aa16.38■□□□□ 0.21
SEMA3F-208ENST00000470737 KIAA1211Q6ZU35 1233 aa16.38■□□□□ 0.21
SEMA3F-208ENST00000470737 SLC28A3Q9HAS3 691 aa16.38■□□□□ 0.21
SEMA3F-208ENST00000470737 PDGFCQ9NRA1 345 aa16.38■□□□□ 0.21
SEMA3F-208ENST00000470737 TTC28Q96AY4 2481 aa16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 NMT2O60551 498 aa16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 IGFBP4P22692 258 aa16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 CCL23P55773 120 aa16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 TAPT1Q6NXT6 567 aa16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 OTOP2Q7RTS6 562 aa16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 OTUD7AQ8TE49 926 aaPredicted RBP16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 MPHOSPH6Q99547 160 aaKnown RBP16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 NOC4LQ9BVI4 516 aaKnown RBP16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 NKX2-4Q9H2Z4 354 aa16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 IL17RBQ9NRM6 502 aa16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 POLR3EQ9NVU0 708 aa16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 THEGQ9P2T0 379 aa16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 SPTBN5Q9NRC6 3674 aaKnown RBP16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 LCTP09848 1927 aa16.37■□□□□ 0.21
SEMA3F-208ENST00000470737 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 B4GALT4O60513 344 aa16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 PSMC6P62333 389 aa16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 RRP12Q5JTH9 1297 aaKnown RBP16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 SYDE2Q5VT97 1194 aa16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 IL27Q8NEV9 243 aa16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 ATXN2LQ8WWM7 1075 aaKnown RBP16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 TRPV6Q9H1D0 765 aa16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 RANBP17Q9H2T7 1088 aaKnown RBP16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 INCENPQ9NQS7 918 aa16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 GPHNQ9NQX3 736 aaPredicted RBP16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 CXXC1Q9P0U4 656 aaPredicted RBP16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 ANAPC4Q9UJX5 808 aa16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 PNMA2Q9UL42 364 aa16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 SLC4A7Q9Y6M7 1214 aa16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 DDX49Q9Y6V7 483 aaKnown RBP16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 UMODL1Q5DID0 1318 aa16.36■□□□□ 0.21
SEMA3F-208ENST00000470737 LOC102724159A0A0B4J2E5 919 aa16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 ZBBXA8MT70 800 aa16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 TNFRSF10AO00220 468 aa16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 ORC4O43929 436 aa16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 SUPT20HL2P0C7V6 817 aa16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 CPT1AP50416 773 aa16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 ALDH5A1P51649 535 aaPredicted RBP16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 BAATQ14032 418 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms