RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 SAMD1Q6SPF0 538 aaPredicted RBP9.52□□□□□ -0.89
GTF3A-206ENST00000470606 FBXO11Q86XK2 927 aa9.52□□□□□ -0.89
GTF3A-206ENST00000470606 CCDC12Q8WUD4 166 aaPredicted RBP9.52□□□□□ -0.89
GTF3A-206ENST00000470606 LPAR1Q92633 364 aa9.52□□□□□ -0.89
GTF3A-206ENST00000470606 HOOK2Q96ED9 719 aa9.52□□□□□ -0.89
GTF3A-206ENST00000470606 AMNQ9BXJ7 453 aa9.52□□□□□ -0.89
GTF3A-206ENST00000470606 SH2D4AQ9H788 454 aa9.52□□□□□ -0.89
GTF3A-206ENST00000470606 PSTPIP2Q9H939 334 aa9.52□□□□□ -0.89
GTF3A-206ENST00000470606 PICK1Q9NRD5 415 aa9.52□□□□□ -0.89
GTF3A-206ENST00000470606 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.52□□□□□ -0.89
GTF3A-206ENST00000470606 HPSEQ9Y251 543 aa9.52□□□□□ -0.89
GTF3A-206ENST00000470606 FAM237AA0A1B0GTK4 181 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 CCDC194A0A1B0GVG4 234 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 IQCA1LA6NCM1 817 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 PFKFB1P16118 471 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 TRAPPC10P48553 1259 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 CCDC183Q5T5S1 534 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 RESP18Q5W5W9 173 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 PPP1R18Q6NYC8 613 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 KRI1Q8N9T8 703 aaKnown RBP9.51□□□□□ -0.89
GTF3A-206ENST00000470606 TBCKQ8TEA7 893 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 CRYGNQ8WXF5 182 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 ERCC4Q92889 916 aaPredicted RBP9.51□□□□□ -0.89
GTF3A-206ENST00000470606 AGBL1Q96MI9 1066 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 FUCA2Q9BTY2 467 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 CSRNP2Q9H175 543 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 RPAP3Q9H6T3 665 aaPredicted RBP9.51□□□□□ -0.89
GTF3A-206ENST00000470606 FEM1BQ9UK73 627 aa9.51□□□□□ -0.89
GTF3A-206ENST00000470606 SRPRBQ9Y5M8 271 aaKnown RBP9.51□□□□□ -0.89
GTF3A-206ENST00000470606 MORC2Q9Y6X9 1032 aaPredicted RBP9.51□□□□□ -0.89
GTF3A-206ENST00000470606 A0A087X0B3 334 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 HOXA13P31271 388 aaPredicted RBP9.5□□□□□ -0.89
GTF3A-206ENST00000470606 FAM160A1Q05DH4 1040 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 NONOQ15233 471 aaKnown RBP eCLIP9.5□□□□□ -0.89
GTF3A-206ENST00000470606 KRT25Q7Z3Z0 450 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 CHURC1Q8WUH1 139 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 MRPS27Q92552 414 aaKnown RBP9.5□□□□□ -0.89
GTF3A-206ENST00000470606 C12orf42Q96LP6 360 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 RRAGCQ9HB90 399 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 NMRK2Q9NPI5 230 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 A0A087WWV3 80 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 IRF6O14896 467 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 SLC37A4O43826 429 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 CUTAO60888 179 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 TDP2O95551 362 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 MAP3K11Q16584 847 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 RBM43Q6ZSC3 357 aaKnown RBP9.5□□□□□ -0.89
GTF3A-206ENST00000470606 PNMA8AQ86V59 439 aaPredicted RBP9.5□□□□□ -0.89
GTF3A-206ENST00000470606 FAM160B2Q86V87 743 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 LDHDQ86WU2 507 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 CKAP2LQ8IYA6 745 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 PRPF38AQ8NAV1 312 aaKnown RBP9.5□□□□□ -0.89
GTF3A-206ENST00000470606 CUL5Q93034 780 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 EPSTI1Q96J88 318 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 SLF1Q9BQI6 1058 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 TANGO6Q9C0B7 1094 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 CLSTN2Q9H4D0 955 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 ELP3Q9H9T3 547 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 SLC38A10Q9HBR0 1119 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 PPP1R9AQ9ULJ8 1098 aa9.5□□□□□ -0.89
GTF3A-206ENST00000470606 NOL7Q9UMY1 257 aaKnown RBP9.5□□□□□ -0.89
GTF3A-206ENST00000470606 LOC285556D6RIA3 1793 aa9.49□□□□□ -0.89
GTF3A-206ENST00000470606 PPP1R12BO60237 982 aaPredicted RBP9.49□□□□□ -0.89
GTF3A-206ENST00000470606 PEX10O60683 326 aa9.49□□□□□ -0.89
GTF3A-206ENST00000470606 FLOT1O75955 427 aa9.49□□□□□ -0.89
GTF3A-206ENST00000470606 ZNF202O95125 648 aa9.49□□□□□ -0.89
GTF3A-206ENST00000470606 CDC25AP30304 524 aa9.49□□□□□ -0.89
GTF3A-206ENST00000470606 GJA5P36382 358 aa9.49□□□□□ -0.89
GTF3A-206ENST00000470606 MRPL12P52815 198 aaKnown RBP9.49□□□□□ -0.89
GTF3A-206ENST00000470606 LETM2Q2VYF4 491 aa9.49□□□□□ -0.89
GTF3A-206ENST00000470606 TREML2Q5T2D2 321 aa9.49□□□□□ -0.89
GTF3A-206ENST00000470606 NEK8Q86SG6 692 aa9.49□□□□□ -0.89
GTF3A-206ENST00000470606 REPS2Q8NFH8 660 aa9.49□□□□□ -0.89
GTF3A-206ENST00000470606 CLEC4DQ8WXI8 215 aa9.49□□□□□ -0.89
GTF3A-206ENST00000470606 GJA10Q969M2 543 aa9.49□□□□□ -0.89
GTF3A-206ENST00000470606 ATG4CQ96DT6 458 aa9.49□□□□□ -0.89
GTF3A-206ENST00000470606 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.48□□□□□ -0.89
GTF3A-206ENST00000470606 VWA3AA6NCI4 1184 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 C19orf81C9J6K1 198 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 VWA5AO00534 786 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 CCNT1O60563 726 aaKnown RBP9.48□□□□□ -0.89
GTF3A-206ENST00000470606 USP14P54578 494 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 MOGSQ13724 837 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 SH3D19Q5HYK7 790 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 LDLRAD1Q5T700 205 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 LRSAM1Q6UWE0 723 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 JMYQ8N9B5 988 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 ZNF579Q8NAF0 562 aaKnown RBP9.48□□□□□ -0.89
GTF3A-206ENST00000470606 PANK2Q9BZ23 570 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 RBSNQ9H1K0 784 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 NUP62CLQ9H1M0 184 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 AS3MTQ9HBK9 375 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 RAVER2Q9HCJ3 691 aaKnown RBP9.48□□□□□ -0.89
GTF3A-206ENST00000470606 DDX19AQ9NUU7 478 aaKnown RBP9.48□□□□□ -0.89
GTF3A-206ENST00000470606 ADAMTS5Q9UNA0 930 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 CLEC11AQ9Y240 323 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 RIPK3Q9Y572 518 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 SPDYE5A6NIY4 337 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 PP2D1A8MPX8 630 aa9.48□□□□□ -0.89
GTF3A-206ENST00000470606 PIK3CDO00329 1044 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms