RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 ZNF281Q9Y2X9 895 aa7.51□□□□□ -1.21
RBM39-227ENST00000470563 HMX2A2RU54 273 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 PRR33A8MZF0 331 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 ARVCFO00192 962 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 VAV1P15498 845 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 FLT3P36888 993 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 GATA4P43694 442 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 EXOSC10Q01780 885 aaKnown RBP7.5□□□□□ -1.21
RBM39-227ENST00000470563 SCRN1Q12765 414 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 PPP2R5DQ14738 602 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 NKPD1Q17RQ9 610 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 DUSP27Q5VZP5 1158 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 RNF111Q6ZNA4 994 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 NECAB2Q7Z6G3 386 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 SPACA3Q8IXA5 215 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 FRS2Q8WU20 508 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 MAGEB10Q96LZ2 347 aaPredicted RBP7.5□□□□□ -1.21
RBM39-227ENST00000470563 FCRL3Q96P31 734 aaPredicted RBP7.5□□□□□ -1.21
RBM39-227ENST00000470563 NDOR1Q9UHB4 597 aa7.5□□□□□ -1.21
RBM39-227ENST00000470563 C2orf71A6NGG8 1288 aa7.49□□□□□ -1.21
RBM39-227ENST00000470563 VAMP4O75379 141 aa7.49□□□□□ -1.21
RBM39-227ENST00000470563 CBX7O95931 251 aa7.49□□□□□ -1.21
RBM39-227ENST00000470563 F13BP05160 661 aa7.49□□□□□ -1.21
RBM39-227ENST00000470563 LTBRP36941 435 aa7.49□□□□□ -1.21
RBM39-227ENST00000470563 GPR85P60893 370 aa7.49□□□□□ -1.21
RBM39-227ENST00000470563 NFIAQ12857 509 aa7.49□□□□□ -1.21
RBM39-227ENST00000470563 CLEC16AQ2KHT3 1053 aa7.49□□□□□ -1.21
RBM39-227ENST00000470563 ZNF765Q7L2R6 523 aa7.49□□□□□ -1.21
RBM39-227ENST00000470563 TMPRSS7Q7RTY8 843 aa7.49□□□□□ -1.21
RBM39-227ENST00000470563 HOMER2Q9NSB8 354 aa7.49□□□□□ -1.21
RBM39-227ENST00000470563 MEFVO15553 781 aaPredicted RBP7.48□□□□□ -1.21
RBM39-227ENST00000470563 BRINP1O60477 761 aa7.48□□□□□ -1.21
RBM39-227ENST00000470563 APPP05067 770 aa7.48□□□□□ -1.21
RBM39-227ENST00000470563 CEACAM5P06731 702 aa7.48□□□□□ -1.21
RBM39-227ENST00000470563 THBDP07204 575 aa7.48□□□□□ -1.21
RBM39-227ENST00000470563 KCNJ6P48051 423 aa7.48□□□□□ -1.21
RBM39-227ENST00000470563 KCNMA1Q12791 1236 aa7.48□□□□□ -1.21
RBM39-227ENST00000470563 C21orf62-AS1Q17RA5 79 aa7.48□□□□□ -1.21
RBM39-227ENST00000470563 CRTC3Q6UUV7 619 aa7.48□□□□□ -1.21
RBM39-227ENST00000470563 DDX46Q7L014 1031 aaKnown RBP7.48□□□□□ -1.21
RBM39-227ENST00000470563 FGD2Q7Z6J4 655 aa7.48□□□□□ -1.21
RBM39-227ENST00000470563 DDX42Q86XP3 938 aaKnown RBP eCLIP7.48□□□□□ -1.21
RBM39-227ENST00000470563 IFNL3Q8IZI9 196 aa7.48□□□□□ -1.21
RBM39-227ENST00000470563 MTFR1LQ9H019 292 aa7.48□□□□□ -1.21
RBM39-227ENST00000470563 TNPO3Q9Y5L0 923 aaKnown RBP7.48□□□□□ -1.21
RBM39-227ENST00000470563 ASXL2Q76L83 1435 aa7.47□□□□□ -1.21
RBM39-227ENST00000470563 FAM170BA6NMN3 283 aa7.47□□□□□ -1.21
RBM39-227ENST00000470563 FGF10O15520 208 aaPredicted RBP7.47□□□□□ -1.21
RBM39-227ENST00000470563 CNGA1P29973 690 aa7.47□□□□□ -1.21
RBM39-227ENST00000470563 CDKN1CP49918 316 aaPredicted RBP7.47□□□□□ -1.21
RBM39-227ENST00000470563 PCBP3P57721 371 aaKnown RBP7.47□□□□□ -1.21
RBM39-227ENST00000470563 NFKB2Q00653 900 aa7.47□□□□□ -1.21
RBM39-227ENST00000470563 RTP2Q5QGT7 225 aa7.47□□□□□ -1.21
RBM39-227ENST00000470563 ZCCHC8Q6NZY4 707 aaKnown RBP7.47□□□□□ -1.21
RBM39-227ENST00000470563 CYP2R1Q6VVX0 501 aa7.47□□□□□ -1.21
RBM39-227ENST00000470563 PPIL6Q8IXY8 311 aa7.47□□□□□ -1.21
RBM39-227ENST00000470563 USHBP1Q8N6Y0 703 aa7.47□□□□□ -1.21
RBM39-227ENST00000470563 TP53INP1Q96A56 240 aa7.47□□□□□ -1.21
RBM39-227ENST00000470563 SEMA3GQ9NS98 782 aa7.47□□□□□ -1.21
RBM39-227ENST00000470563 PHLDB1Q86UU1 1377 aa7.46□□□□□ -1.21
RBM39-227ENST00000470563 FAM155AB1AL88 458 aaPredicted RBP7.46□□□□□ -1.22
RBM39-227ENST00000470563 IGLV1-40P01703 118 aa7.46□□□□□ -1.22
RBM39-227ENST00000470563 CD3EP07766 207 aa7.46□□□□□ -1.22
RBM39-227ENST00000470563 BPIP17213 487 aa7.46□□□□□ -1.22
RBM39-227ENST00000470563 KCNA6P17658 529 aa7.46□□□□□ -1.22
RBM39-227ENST00000470563 CT47A1Q5JQC4 288 aaPredicted RBP7.46□□□□□ -1.22
RBM39-227ENST00000470563 CCDC181Q5TID7 509 aa7.46□□□□□ -1.22
RBM39-227ENST00000470563 WWC2Q6AWC2 1192 aa7.46□□□□□ -1.22
RBM39-227ENST00000470563 LBX2Q6XYB7 198 aa7.46□□□□□ -1.22
RBM39-227ENST00000470563 USP53Q70EK8 1073 aa7.46□□□□□ -1.22
RBM39-227ENST00000470563 UBE2R2Q712K3 238 aaPredicted RBP7.46□□□□□ -1.22
RBM39-227ENST00000470563 JAMLQ86YT9 394 aa7.46□□□□□ -1.22
RBM39-227ENST00000470563 KSR1Q8IVT5 923 aa7.46□□□□□ -1.22
RBM39-227ENST00000470563 Q8N1Y9 231 aa7.46□□□□□ -1.22
RBM39-227ENST00000470563 PCGF6Q9BYE7 350 aa7.46□□□□□ -1.22
RBM39-227ENST00000470563 TMEM265A0A087WTH1 108 aa7.45□□□□□ -1.22
RBM39-227ENST00000470563 STXBP3O00186 592 aa7.45□□□□□ -1.22
RBM39-227ENST00000470563 OPA1O60313 960 aa7.45□□□□□ -1.22
RBM39-227ENST00000470563 ZEB2O60315 1214 aa7.45□□□□□ -1.22
RBM39-227ENST00000470563 ECI1P42126 302 aa7.45□□□□□ -1.22
RBM39-227ENST00000470563 SEPHS1P49903 392 aa7.45□□□□□ -1.22
RBM39-227ENST00000470563 IFI16Q16666 785 aaKnown RBP7.45□□□□□ -1.22
RBM39-227ENST00000470563 PRSS53Q2L4Q9 553 aa7.45□□□□□ -1.22
RBM39-227ENST00000470563 RNF219Q5W0B1 726 aaPredicted RBP7.45□□□□□ -1.22
RBM39-227ENST00000470563 FERMT3Q86UX7 667 aa7.45□□□□□ -1.22
RBM39-227ENST00000470563 PANK1Q8TE04 598 aa7.45□□□□□ -1.22
RBM39-227ENST00000470563 MFSD14AQ96MC6 490 aa7.45□□□□□ -1.22
RBM39-227ENST00000470563 PHF20Q9BVI0 1012 aa7.45□□□□□ -1.22
RBM39-227ENST00000470563 CELF4Q9BZC1 486 aaKnown RBP7.45□□□□□ -1.22
RBM39-227ENST00000470563 ADGRE2Q9UHX3 823 aa7.45□□□□□ -1.22
RBM39-227ENST00000470563 PITPNM2Q9BZ72 1349 aa7.45□□□□□ -1.22
RBM39-227ENST00000470563 ARNTLO00327 626 aa7.44□□□□□ -1.22
RBM39-227ENST00000470563 CRTAMO95727 393 aa7.44□□□□□ -1.22
RBM39-227ENST00000470563 IFNGR1P15260 489 aa7.44□□□□□ -1.22
RBM39-227ENST00000470563 GSK3AP49840 483 aa7.44□□□□□ -1.22
RBM39-227ENST00000470563 GTF2A2P52657 109 aa7.44□□□□□ -1.22
RBM39-227ENST00000470563 KIZQ2M2Z5 673 aa7.44□□□□□ -1.22
RBM39-227ENST00000470563 DPY19L1Q2PZI1 675 aa7.44□□□□□ -1.22
RBM39-227ENST00000470563 PKN3Q6P5Z2 889 aa7.44□□□□□ -1.22
RBM39-227ENST00000470563 DDX53Q86TM3 631 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms