RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 PCSK9Q8NBP7 692 aaKnown RBP36.86■■■■□ 3.49
HMG20B-209ENST00000470356 ESR2Q92731 530 aa36.86■■■■□ 3.49
HMG20B-209ENST00000470356 GPCPD1Q9NPB8 672 aa36.86■■■■□ 3.49
HMG20B-209ENST00000470356 SUPT16HQ9Y5B9 1047 aaKnown RBP36.86■■■■□ 3.49
HMG20B-209ENST00000470356 FRMPD2Q68DX3 1309 aaPredicted RBP36.85■■■■□ 3.49
HMG20B-209ENST00000470356 LAMA4Q16363 1823 aa36.85■■■■□ 3.49
HMG20B-209ENST00000470356 NT5C2P49902 561 aa36.85■■■■□ 3.49
HMG20B-209ENST00000470356 TOX2Q96NM4 488 aa36.85■■■■□ 3.49
HMG20B-209ENST00000470356 ANKRD33Q7Z3H0 272 aa36.84■■■■□ 3.49
HMG20B-209ENST00000470356 ASTN1O14525 1302 aa36.84■■■■□ 3.49
HMG20B-209ENST00000470356 NEDD4P46934 1319 aa36.84■■■■□ 3.49
HMG20B-209ENST00000470356 KIAA0355O15063 1070 aa36.83■■■■□ 3.49
HMG20B-209ENST00000470356 PQBP1O60828 265 aaKnown RBP36.83■■■■□ 3.49
HMG20B-209ENST00000470356 NKX3-2P78367 333 aa36.83■■■■□ 3.49
HMG20B-209ENST00000470356 IRX5P78411 483 aaPredicted RBP36.83■■■■□ 3.49
HMG20B-209ENST00000470356 NSMFQ6X4W1 530 aa36.83■■■■□ 3.49
HMG20B-209ENST00000470356 GLT1D1Q96MS3 346 aa36.83■■■■□ 3.49
HMG20B-209ENST00000470356 LAMA2P24043 3122 aaKnown RBP36.83■■■■□ 3.49
HMG20B-209ENST00000470356 LCTP09848 1927 aa36.83■■■■□ 3.49
HMG20B-209ENST00000470356 ELP1O95163 1332 aa36.83■■■■□ 3.49
HMG20B-209ENST00000470356 SNHG28P0DPA3 235 aa36.82■■■■□ 3.48
HMG20B-209ENST00000470356 TNFAIP2Q03169 654 aa36.82■■■■□ 3.48
HMG20B-209ENST00000470356 ZNF543Q08ER8 600 aa36.82■■■■□ 3.48
HMG20B-209ENST00000470356 GNASQ5JWF2 1037 aa36.82■■■■□ 3.48
HMG20B-209ENST00000470356 DGKHQ86XP1 1220 aa36.82■■■■□ 3.48
HMG20B-209ENST00000470356 DSCC1Q9BVC3 393 aa36.82■■■■□ 3.48
HMG20B-209ENST00000470356 ASGR1P07306 291 aa36.81■■■■□ 3.48
HMG20B-209ENST00000470356 Q7L0L9 218 aa36.81■■■■□ 3.48
HMG20B-209ENST00000470356 PNMA2Q9UL42 364 aa36.81■■■■□ 3.48
HMG20B-209ENST00000470356 DCDC2CA8MYV0 355 aa36.8■■■■□ 3.48
HMG20B-209ENST00000470356 SHHQ15465 462 aa36.8■■■■□ 3.48
HMG20B-209ENST00000470356 CTAGE5O15320 804 aa36.79■■■■□ 3.48
HMG20B-209ENST00000470356 ITGB8P26012 769 aa36.79■■■■□ 3.48
HMG20B-209ENST00000470356 FAAP100Q0VG06 881 aa36.79■■■■□ 3.48
HMG20B-209ENST00000470356 CCDC178Q5BJE1 867 aa36.79■■■■□ 3.48
HMG20B-209ENST00000470356 ZKSCAN3Q9BRR0 538 aa36.79■■■■□ 3.48
HMG20B-209ENST00000470356 TMEM39AQ9NV64 488 aa36.79■■■■□ 3.48
HMG20B-209ENST00000470356 C11orf97A0A1B0GVM6 126 aaPredicted RBP36.78■■■■□ 3.48
HMG20B-209ENST00000470356 BAATQ14032 418 aaPredicted RBP36.78■■■■□ 3.48
HMG20B-209ENST00000470356 MORC4Q8TE76 937 aa36.78■■■■□ 3.48
HMG20B-209ENST00000470356 CTNNA3Q9UI47 895 aa36.78■■■■□ 3.48
HMG20B-209ENST00000470356 GNEQ9Y223 722 aaKnown RBP36.78■■■■□ 3.48
HMG20B-209ENST00000470356 LRRC37A2A6NM11 1700 aa36.77■■■■□ 3.48
HMG20B-209ENST00000470356 KDM4AO75164 1064 aa36.77■■■■□ 3.48
HMG20B-209ENST00000470356 RAG1P15918 1043 aa36.77■■■■□ 3.48
HMG20B-209ENST00000470356 CDK7P50613 346 aa36.77■■■■□ 3.48
HMG20B-209ENST00000470356 C9orf50Q5SZB4 431 aa36.77■■■■□ 3.48
HMG20B-209ENST00000470356 GPATCH4Q5T3I0 446 aaKnown RBP36.77■■■■□ 3.48
HMG20B-209ENST00000470356 NOL8Q76FK4 1167 aaKnown RBP36.77■■■■□ 3.48
HMG20B-209ENST00000470356 IQCA1Q86XH1 822 aa36.77■■■■□ 3.48
HMG20B-209ENST00000470356 MTMR10Q9NXD2 777 aa36.77■■■■□ 3.48
HMG20B-209ENST00000470356 ADD3Q9UEY8 706 aaKnown RBP36.77■■■■□ 3.48
HMG20B-209ENST00000470356 DDX49Q9Y6V7 483 aaKnown RBP36.77■■■■□ 3.48
HMG20B-209ENST00000470356 COL6A3P12111 3177 aa36.77■■■■□ 3.48
HMG20B-209ENST00000470356 NFIBO00712 420 aa36.76■■■■□ 3.48
HMG20B-209ENST00000470356 IMMTQ16891 758 aaKnown RBP36.76■■■■□ 3.48
HMG20B-209ENST00000470356 IQSEC1Q6DN90 963 aa36.76■■■■□ 3.48
HMG20B-209ENST00000470356 TAPT1Q6NXT6 567 aa36.76■■■■□ 3.48
HMG20B-209ENST00000470356 ANKS1AQ92625 1134 aa36.76■■■■□ 3.48
HMG20B-209ENST00000470356 VTI1AQ96AJ9 217 aa36.76■■■■□ 3.48
HMG20B-209ENST00000470356 PURBQ96QR8 312 aaKnown RBP36.76■■■■□ 3.48
HMG20B-209ENST00000470356 MROH7Q68CQ1 1323 aa36.76■■■■□ 3.47
HMG20B-209ENST00000470356 FAM109BQ6ICB4 259 aaPredicted RBP36.75■■■■□ 3.47
HMG20B-209ENST00000470356 VTA1Q9NP79 307 aa36.75■■■■□ 3.47
HMG20B-209ENST00000470356 LOC102724159A0A0B4J2E5 919 aa36.74■■■■□ 3.47
HMG20B-209ENST00000470356 SMPD1P17405 629 aa36.74■■■■□ 3.47
HMG20B-209ENST00000470356 PDE4AP27815 886 aa36.74■■■■□ 3.47
HMG20B-209ENST00000470356 PWP2Q15269 919 aaKnown RBP36.74■■■■□ 3.47
HMG20B-209ENST00000470356 EEPD1Q7L9B9 569 aa36.74■■■■□ 3.47
HMG20B-209ENST00000470356 TLK2Q86UE8 772 aa36.74■■■■□ 3.47
HMG20B-209ENST00000470356 CLEC4DQ8WXI8 215 aa36.74■■■■□ 3.47
HMG20B-209ENST00000470356 PDGFCQ9NRA1 345 aa36.74■■■■□ 3.47
HMG20B-209ENST00000470356 WDR19Q8NEZ3 1342 aa36.74■■■■□ 3.47
HMG20B-209ENST00000470356 A0A0U1RQG5 324 aaPredicted RBP36.73■■■■□ 3.47
HMG20B-209ENST00000470356 B4E1Z4 1266 aa36.73■■■■□ 3.47
HMG20B-209ENST00000470356 BEX3Q00994 111 aa36.73■■■■□ 3.47
HMG20B-209ENST00000470356 FBXO16Q8IX29 292 aaPredicted RBP36.73■■■■□ 3.47
HMG20B-209ENST00000470356 PNMA1Q8ND90 353 aa36.73■■■■□ 3.47
HMG20B-209ENST00000470356 AP5M1Q9H0R1 490 aa36.73■■■■□ 3.47
HMG20B-209ENST00000470356 Q9Y3F1 56 aa36.73■■■■□ 3.47
HMG20B-209ENST00000470356 ARVCFO00192 962 aa36.72■■■■□ 3.47
HMG20B-209ENST00000470356 ZSCAN10Q96SZ4 725 aaPredicted RBP36.72■■■■□ 3.47
HMG20B-209ENST00000470356 ZSWIM5Q9P217 1185 aa36.72■■■■□ 3.47
HMG20B-209ENST00000470356 TBX21Q9UL17 535 aa36.72■■■■□ 3.47
HMG20B-209ENST00000470356 PTPDC1A2A3K4 754 aa36.71■■■■□ 3.47
HMG20B-209ENST00000470356 GOLGA8HP0CJ92 632 aa36.71■■■■□ 3.47
HMG20B-209ENST00000470356 ALDH5A1P51649 535 aaPredicted RBP36.71■■■■□ 3.47
HMG20B-209ENST00000470356 TTC22Q5TAA0 569 aa36.71■■■■□ 3.47
HMG20B-209ENST00000470356 DYNC1LI2O43237 492 aaPredicted RBP36.7■■■■□ 3.47
HMG20B-209ENST00000470356 FPGSQ05932 587 aa36.7■■■■□ 3.47
HMG20B-209ENST00000470356 FSCN1Q16658 493 aaKnown RBP36.7■■■■□ 3.47
HMG20B-209ENST00000470356 RNF207Q6ZRF8 634 aa36.7■■■■□ 3.47
HMG20B-209ENST00000470356 KRT23Q9C075 422 aa36.7■■■■□ 3.47
HMG20B-209ENST00000470356 KAT14Q9H8E8 782 aa36.7■■■■□ 3.47
HMG20B-209ENST00000470356 CABYRO75952 493 aa36.69■■■■□ 3.46
HMG20B-209ENST00000470356 TIMP1P01033 207 aa36.69■■■■□ 3.46
HMG20B-209ENST00000470356 GSPT1P15170 499 aaKnown RBP36.69■■■■□ 3.46
HMG20B-209ENST00000470356 KIAA1211Q6ZU35 1233 aa36.69■■■■□ 3.46
HMG20B-209ENST00000470356 ENAHQ8N8S7 591 aaPredicted RBP36.69■■■■□ 3.46
HMG20B-209ENST00000470356 IL25Q9H293 177 aa36.69■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms