RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 NOC4LQ9BVI4 516 aaKnown RBP10.93□□□□□ -0.66
CCDC171-204ENST00000470191 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCDC171-204ENST00000470191 AP5M1Q9H0R1 490 aa10.93□□□□□ -0.66
CCDC171-204ENST00000470191 WNT8AQ9H1J5 351 aa10.93□□□□□ -0.66
CCDC171-204ENST00000470191 HCN4Q9Y3Q4 1203 aa10.93□□□□□ -0.66
CCDC171-204ENST00000470191 FARP1Q9Y4F1 1045 aaPredicted RBP10.93□□□□□ -0.66
CCDC171-204ENST00000470191 PCDHA11Q9Y5I1 949 aa10.93□□□□□ -0.66
CCDC171-204ENST00000470191 LCTP09848 1927 aa10.93□□□□□ -0.66
CCDC171-204ENST00000470191 CHD7Q9P2D1 2997 aa10.92□□□□□ -0.66
CCDC171-204ENST00000470191 PTPRSQ13332 1948 aa10.92□□□□□ -0.66
CCDC171-204ENST00000470191 GRIN2DO15399 1336 aa10.92□□□□□ -0.66
CCDC171-204ENST00000470191 GTPBP6O43824 516 aaPredicted RBP10.92□□□□□ -0.66
CCDC171-204ENST00000470191 CA3P07451 260 aa10.92□□□□□ -0.66
CCDC171-204ENST00000470191 RASA1P20936 1047 aa10.92□□□□□ -0.66
CCDC171-204ENST00000470191 IKQ13123 557 aaPredicted RBP10.92□□□□□ -0.66
CCDC171-204ENST00000470191 TTLL4Q14679 1199 aa10.92□□□□□ -0.66
CCDC171-204ENST00000470191 FSCN1Q16658 493 aaKnown RBP10.92□□□□□ -0.66
CCDC171-204ENST00000470191 HSP90AB4PQ58FF6 505 aa10.92□□□□□ -0.66
CCDC171-204ENST00000470191 TMEM63BQ5T3F8 832 aa10.92□□□□□ -0.66
CCDC171-204ENST00000470191 RPUSD2Q8IZ73 545 aaKnown RBP10.92□□□□□ -0.66
CCDC171-204ENST00000470191 LRRC47Q8N1G4 583 aaKnown RBP10.92□□□□□ -0.66
CCDC171-204ENST00000470191 PANK1Q8TE04 598 aa10.92□□□□□ -0.66
CCDC171-204ENST00000470191 KATNBL1Q9H079 304 aa10.92□□□□□ -0.66
CCDC171-204ENST00000470191 PUS7LQ9H0K6 701 aaKnown RBP10.92□□□□□ -0.66
CCDC171-204ENST00000470191 PDGFCQ9NRA1 345 aa10.92□□□□□ -0.66
CCDC171-204ENST00000470191 FBXO40Q9UH90 709 aa10.92□□□□□ -0.66
CCDC171-204ENST00000470191 BDP1A6H8Y1 2624 aa10.92□□□□□ -0.66
CCDC171-204ENST00000470191 SOWAHBA6NEL2 793 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 EPOPA6NHQ4 379 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 PRDM1O75626 825 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 CYP2C9P11712 490 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 SNAP25P60880 206 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 TMEM67Q5HYA8 995 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 SLC43A3Q8NBI5 491 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 CHST13Q8NET6 341 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCDC171-204ENST00000470191 ARNTL2Q8WYA1 636 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 KIF1BPQ96EK5 621 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 AGBL1Q96MI9 1066 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 SLC38A10Q9HBR0 1119 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 NYAP2Q9P242 653 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 COG6Q9Y2V7 657 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 MTCH2Q9Y6C9 303 aa10.91□□□□□ -0.66
CCDC171-204ENST00000470191 TANC1Q9C0D5 1861 aa10.9□□□□□ -0.66
CCDC171-204ENST00000470191 TMEM232C9JQI7 657 aa10.9□□□□□ -0.66
CCDC171-204ENST00000470191 ATP2A1O14983 1001 aa10.9□□□□□ -0.66
CCDC171-204ENST00000470191 ERC2O15083 957 aa10.9□□□□□ -0.66
CCDC171-204ENST00000470191 ZEB2O60315 1214 aa10.9□□□□□ -0.66
CCDC171-204ENST00000470191 CABYRO75952 493 aa10.9□□□□□ -0.66
CCDC171-204ENST00000470191 ALAS1P13196 640 aa10.9□□□□□ -0.66
CCDC171-204ENST00000470191 SMPD1P17405 629 aa10.9□□□□□ -0.66
CCDC171-204ENST00000470191 FAM47CQ5HY64 1035 aa10.9□□□□□ -0.66
CCDC171-204ENST00000470191 TMEM31Q5JXX7 168 aa10.9□□□□□ -0.66
CCDC171-204ENST00000470191 FBXO16Q8IX29 292 aaPredicted RBP10.9□□□□□ -0.66
CCDC171-204ENST00000470191 KHSRPQ92945 711 aaKnown RBP eCLIP10.9□□□□□ -0.66
CCDC171-204ENST00000470191 ACAD9Q9H845 621 aa10.9□□□□□ -0.66
CCDC171-204ENST00000470191 RNF146Q9NTX7 359 aa10.9□□□□□ -0.66
CCDC171-204ENST00000470191 TRMT13Q9NUP7 481 aaKnown RBP10.9□□□□□ -0.66
CCDC171-204ENST00000470191 ARPP21Q9UBL0 812 aaPredicted RBP10.9□□□□□ -0.66
CCDC171-204ENST00000470191 FEM1BQ9UK73 627 aa10.9□□□□□ -0.66
CCDC171-204ENST00000470191 PRRC2BQ5JSZ5 2229 aaKnown RBP10.9□□□□□ -0.66
CCDC171-204ENST00000470191 ZBED9Q6R2W3 1325 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 TRIP12Q14669 1992 aaPredicted RBP10.89□□□□□ -0.67
CCDC171-204ENST00000470191 ASB14A6NK59 587 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 ARHGEF15O94989 841 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 MYL3P08590 195 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 BMP3P12645 472 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 CHMP4BP1P59074 171 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 SLFN13Q68D06 897 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 KIAA1211Q6ZU35 1233 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 SPRED2Q7Z698 418 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 ZNF444Q8N0Y2 327 aaPredicted RBP10.89□□□□□ -0.67
CCDC171-204ENST00000470191 FAM133AQ8N9E0 248 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 VWCEQ96DN2 955 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 CEP95Q96GE4 821 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 TRERF1Q96PN7 1200 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 PURBQ96QR8 312 aaKnown RBP10.89□□□□□ -0.67
CCDC171-204ENST00000470191 FTOQ9C0B1 505 aaKnown RBP eCLIP10.89□□□□□ -0.67
CCDC171-204ENST00000470191 ALDH8A1Q9H2A2 487 aaPredicted RBP10.89□□□□□ -0.67
CCDC171-204ENST00000470191 A1CFQ9NQ94 594 aaKnown RBP10.89□□□□□ -0.67
CCDC171-204ENST00000470191 MTMR7Q9Y216 660 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 GNEQ9Y223 722 aaKnown RBP10.89□□□□□ -0.67
CCDC171-204ENST00000470191 TRANK1O15050 2925 aa10.89□□□□□ -0.67
CCDC171-204ENST00000470191 XIRP2A4UGR9 3374 aa10.88□□□□□ -0.67
CCDC171-204ENST00000470191 RBAK-RBAKDNI3L0D1 243 aa10.88□□□□□ -0.67
CCDC171-204ENST00000470191 TLL1O43897 1013 aa10.88□□□□□ -0.67
CCDC171-204ENST00000470191 APPP05067 770 aa10.88□□□□□ -0.67
CCDC171-204ENST00000470191 ATP5JP18859 108 aa10.88□□□□□ -0.67
CCDC171-204ENST00000470191 UBE3CQ15386 1083 aa10.88□□□□□ -0.67
CCDC171-204ENST00000470191 MUM1L1Q5H9M0 696 aa10.88□□□□□ -0.67
CCDC171-204ENST00000470191 ZSCAN25Q6NSZ9 544 aa10.88□□□□□ -0.67
CCDC171-204ENST00000470191 NSMFQ6X4W1 530 aa10.88□□□□□ -0.67
CCDC171-204ENST00000470191 HLA-CQ95604 372 aa10.88□□□□□ -0.67
CCDC171-204ENST00000470191 HAUS7Q99871 368 aa10.88□□□□□ -0.67
CCDC171-204ENST00000470191 TNKSO95271 1327 aa10.87□□□□□ -0.67
CCDC171-204ENST00000470191 GSG1L2A8MUP6 293 aa10.87□□□□□ -0.67
CCDC171-204ENST00000470191 ACTN1P12814 892 aa10.87□□□□□ -0.67
CCDC171-204ENST00000470191 TDO2P48775 406 aa10.87□□□□□ -0.67
CCDC171-204ENST00000470191 NKX3-2P78367 333 aa10.87□□□□□ -0.67
CCDC171-204ENST00000470191 TAP1Q03518 808 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms