RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 USP17L11C9JVI0 530 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 USP17L18D6R9N7 530 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 USP17L22D6RA61 530 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 USP17L17D6RBQ6 530 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 USP17L19D6RCP7 530 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 USP17L20D6RJB6 530 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 USP17L24Q0WX57 530 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 USP17L6PQ6QN14 398 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 FAM200AQ8TCP9 573 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 GLT8D2Q9H1C3 349 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 NEMFO60524 1076 aa20.6■□□□□ 0.89
SMC4-211ENST00000469858 ZKSCAN4Q969J2 545 aaPredicted RBP20.6■□□□□ 0.89
SMC4-211ENST00000469858 FBXO28Q9NVF7 368 aa20.6■□□□□ 0.89
SMC4-211ENST00000469858 SERTAD1Q9UHV2 236 aa20.6■□□□□ 0.89
SMC4-211ENST00000469858 SSC5DA1L4H1 1573 aa20.6■□□□□ 0.89
SMC4-211ENST00000469858 A0A087X0B3 334 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 LAD1O00515 517 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 PNOCQ13519 176 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 UVSSAQ2YD98 709 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 DTHD1Q6ZMT9 781 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 FAM160B2Q86V87 743 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 SCYL3Q8IZE3 742 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 KIAA1683Q9H0B3 1180 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 ZNF112Q9UJU3 913 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 FEM1BQ9UK73 627 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 PITPNM2Q9BZ72 1349 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 DGKZQ13574 1117 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 ZRSR1Q15695 479 aaKnown RBP20.59■□□□□ 0.89
SMC4-211ENST00000469858 CCDC174Q6PII3 467 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 DHX58Q96C10 678 aa20.59■□□□□ 0.89
SMC4-211ENST00000469858 PLA2G6O60733 806 aa20.58■□□□□ 0.89
SMC4-211ENST00000469858 OR52Z1P0C646 297 aa20.58■□□□□ 0.89
SMC4-211ENST00000469858 LONP1P36776 959 aaKnown RBP20.58■□□□□ 0.89
SMC4-211ENST00000469858 MTMR2Q13614 643 aa20.58■□□□□ 0.89
SMC4-211ENST00000469858 GPR162Q16538 588 aa20.58■□□□□ 0.89
SMC4-211ENST00000469858 C11orf57Q6ZUT1 292 aaPredicted RBP20.58■□□□□ 0.89
SMC4-211ENST00000469858 LPAR1Q92633 364 aa20.58■□□□□ 0.89
SMC4-211ENST00000469858 RANBP17Q9H2T7 1088 aaKnown RBP20.58■□□□□ 0.89
SMC4-211ENST00000469858 CBX8Q9HC52 389 aa20.58■□□□□ 0.89
SMC4-211ENST00000469858 PICK1Q9NRD5 415 aa20.58■□□□□ 0.89
SMC4-211ENST00000469858 ANO10Q9NW15 660 aa20.58■□□□□ 0.89
SMC4-211ENST00000469858 BIN1O00499 593 aa20.57■□□□□ 0.88
SMC4-211ENST00000469858 FOXN1O15353 648 aa20.57■□□□□ 0.88
SMC4-211ENST00000469858 ACTN4O43707 911 aaKnown RBP20.57■□□□□ 0.88
SMC4-211ENST00000469858 TDP2O95551 362 aa20.57■□□□□ 0.88
SMC4-211ENST00000469858 PRPHP41219 470 aa20.57■□□□□ 0.88
SMC4-211ENST00000469858 ZNF165P49910 485 aa20.57■□□□□ 0.88
SMC4-211ENST00000469858 ORC2Q13416 577 aaPredicted RBP20.57■□□□□ 0.88
SMC4-211ENST00000469858 DPY19L2Q6NUT2 758 aa20.57■□□□□ 0.88
SMC4-211ENST00000469858 LUZP1Q86V48 1076 aa20.57■□□□□ 0.88
SMC4-211ENST00000469858 POTEDQ86YR6 584 aa20.57■□□□□ 0.88
SMC4-211ENST00000469858 HOOK1Q9UJC3 728 aaKnown RBP20.57■□□□□ 0.88
SMC4-211ENST00000469858 MEIS2O14770 477 aa20.57■□□□□ 0.88
SMC4-211ENST00000469858 WDR46O15213 610 aaKnown RBP20.57■□□□□ 0.88
SMC4-211ENST00000469858 EDIL3O43854 480 aa20.57■□□□□ 0.88
SMC4-211ENST00000469858 PRKG1Q13976 671 aa20.57■□□□□ 0.88
SMC4-211ENST00000469858 SUPT20HL1Q3ZLR7 823 aa20.57■□□□□ 0.88
SMC4-211ENST00000469858 DCPSQ96C86 337 aaKnown RBP20.57■□□□□ 0.88
SMC4-211ENST00000469858 PHIPQ8WWQ0 1821 aa20.56■□□□□ 0.88
SMC4-211ENST00000469858 CCDC173Q0VFZ6 552 aa20.56■□□□□ 0.88
SMC4-211ENST00000469858 SPP2Q13103 211 aa20.56■□□□□ 0.88
SMC4-211ENST00000469858 KLRG1Q96E93 195 aa20.56■□□□□ 0.88
SMC4-211ENST00000469858 ANO3Q9BYT9 981 aa20.56■□□□□ 0.88
SMC4-211ENST00000469858 CAVIN2O95810 425 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 CDC25AP30304 524 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 TRAF1Q13077 416 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 POSTNQ15063 836 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 DLK2Q6UY11 383 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 ELOA2Q8IYF1 753 aaPredicted RBP20.55■□□□□ 0.88
SMC4-211ENST00000469858 AS3MTQ9HBK9 375 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 OPLAHO14841 1288 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 SLC37A4O43826 429 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 PTPRAP18433 802 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 TXLNAP40222 546 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 AP3B2Q13367 1082 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 CALCRLQ16602 461 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 SULF1Q8IWU6 871 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 GRAMD1CQ8IYS0 662 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 TANGO6Q9C0B7 1094 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 USP25Q9UHP3 1055 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 TUBE1Q9UJT0 475 aa20.55■□□□□ 0.88
SMC4-211ENST00000469858 PP2D1A8MPX8 630 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 ADM5C9JUS6 153 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 PRR29P0C7W0 189 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 VCAM1P19320 739 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 USP14P54578 494 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 MDM2Q00987 491 aaPredicted RBP20.54■□□□□ 0.88
SMC4-211ENST00000469858 DPCR1Q3MIW9 517 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 ISM2Q6H9L7 571 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 KANK3Q6NY19 840 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 CEP57L1Q8IYX8 460 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 WDR18Q9BV38 432 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 EMILIN3Q9NT22 766 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 SLFN14P0C7P3 912 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 PPP4R3AQ6IN85 833 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 ZNF280CQ8ND82 737 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 CCDC34Q96HJ3 373 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 SLF1Q9BQI6 1058 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 PCDHA5Q9Y5H7 936 aa20.54■□□□□ 0.88
SMC4-211ENST00000469858 ZHX2Q9Y6X8 837 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms