RNA–Protein interactions for RNA: ENST00000469804.1

KPNA4-202, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 2

Gene KPNA4, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-202ENST00000469804 TOB2Q14106 344 aaPredicted RBP29.53■■■□□ 2.32
KPNA4-202ENST00000469804 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.53■■■□□ 2.326e-6■□□□□ 8.9
KPNA4-202ENST00000469804 FANCBQ8NB91 859 aa29.53■■■□□ 2.32
KPNA4-202ENST00000469804 DDX11Q96FC9 970 aa29.53■■■□□ 2.32
KPNA4-202ENST00000469804 A1CFQ9NQ94 594 aaKnown RBP29.53■■■□□ 2.32
KPNA4-202ENST00000469804 GOLGA8BA8MQT2 603 aa29.52■■■□□ 2.32
KPNA4-202ENST00000469804 NFIBO00712 420 aa29.52■■■□□ 2.32
KPNA4-202ENST00000469804 PPP1R11O60927 126 aaPredicted RBP29.52■■■□□ 2.32
KPNA4-202ENST00000469804 SRBD1Q8N5C6 995 aaKnown RBP29.52■■■□□ 2.32
KPNA4-202ENST00000469804 GOLGA8AA7E2F4 631 aa29.51■■■□□ 2.31
KPNA4-202ENST00000469804 ZNF792Q3KQV3 632 aa29.51■■■□□ 2.31
KPNA4-202ENST00000469804 NSMFQ6X4W1 530 aa29.51■■■□□ 2.31
KPNA4-202ENST00000469804 FBXL16Q8N461 479 aa29.51■■■□□ 2.31
KPNA4-202ENST00000469804 CLEC4DQ8WXI8 215 aa29.51■■■□□ 2.31
KPNA4-202ENST00000469804 MAML3Q96JK9 1138 aa29.51■■■□□ 2.31
KPNA4-202ENST00000469804 LARP6Q9BRS8 491 aaKnown RBP29.51■■■□□ 2.31
KPNA4-202ENST00000469804 PDRG1Q9NUG6 133 aa29.51■■■□□ 2.31
KPNA4-202ENST00000469804 DNAJC25-GNG10A0A024R161 153 aa29.5■■■□□ 2.31
KPNA4-202ENST00000469804 ZBTB5O15062 677 aa29.5■■■□□ 2.31
KPNA4-202ENST00000469804 UBXN2AP68543 259 aa29.5■■■□□ 2.31
KPNA4-202ENST00000469804 RTN1Q16799 776 aa29.5■■■□□ 2.31
KPNA4-202ENST00000469804 TMTC3Q6ZXV5 915 aa29.5■■■□□ 2.31
KPNA4-202ENST00000469804 FBXO11Q86XK2 927 aa29.5■■■□□ 2.31
KPNA4-202ENST00000469804 CCDC82Q8N4S0 544 aa29.5■■■□□ 2.31
KPNA4-202ENST00000469804 SPZ1Q9BXG8 430 aa29.5■■■□□ 2.31
KPNA4-202ENST00000469804 SOX10P56693 466 aa29.49■■■□□ 2.31
KPNA4-202ENST00000469804 IL17RAQ96F46 866 aa29.49■■■□□ 2.31
KPNA4-202ENST00000469804 UNC93B1Q9H1C4 597 aa29.49■■■□□ 2.31
KPNA4-202ENST00000469804 SLC5A4Q9NY91 659 aa29.49■■■□□ 2.31
KPNA4-202ENST00000469804 CDC27P30260 824 aa29.48■■■□□ 2.31
KPNA4-202ENST00000469804 CYP2C19P33261 490 aa29.48■■■□□ 2.31
KPNA4-202ENST00000469804 GNAQP50148 359 aa29.48■■■□□ 2.31
KPNA4-202ENST00000469804 CNTN2Q02246 1040 aa29.48■■■□□ 2.31
KPNA4-202ENST00000469804 TRMT44Q8IYL2 757 aaKnown RBP29.48■■■□□ 2.31
KPNA4-202ENST00000469804 FGD4Q96M96 766 aa29.48■■■□□ 2.31
KPNA4-202ENST00000469804 LZTS2Q9BRK4 669 aa29.48■■■□□ 2.31
KPNA4-202ENST00000469804 AMNQ9BXJ7 453 aa29.48■■■□□ 2.31
KPNA4-202ENST00000469804 FAM217BQ9NTX9 383 aaPredicted RBP29.48■■■□□ 2.31
KPNA4-202ENST00000469804 PNMA2Q9UL42 364 aa29.48■■■□□ 2.31
KPNA4-202ENST00000469804 FRMPD3Q5JV73 1810 aa29.48■■■□□ 2.31
KPNA4-202ENST00000469804 ABCB11O95342 1321 aa29.47■■■□□ 2.31
KPNA4-202ENST00000469804 CCL5P13501 91 aa29.47■■■□□ 2.31
KPNA4-202ENST00000469804 PRKAR2AP13861 404 aaKnown RBP29.47■■■□□ 2.31
KPNA4-202ENST00000469804 METAP2P50579 478 aaKnown RBP eCLIP29.47■■■□□ 2.31
KPNA4-202ENST00000469804 CACNB2Q08289 660 aaPredicted RBP29.47■■■□□ 2.31
KPNA4-202ENST00000469804 SLC30A10Q6XR72 485 aa29.47■■■□□ 2.31
KPNA4-202ENST00000469804 PURBQ96QR8 312 aaKnown RBP29.47■■■□□ 2.31
KPNA4-202ENST00000469804 RBM28Q9NW13 759 aaKnown RBP29.47■■■□□ 2.31
KPNA4-202ENST00000469804 CYP39A1Q9NYL5 469 aa29.47■■■□□ 2.31
KPNA4-202ENST00000469804 CNTNAP5Q8WYK1 1306 aa29.46■■■□□ 2.31
KPNA4-202ENST00000469804 LRRC37A2A6NM11 1700 aa29.46■■■□□ 2.31
KPNA4-202ENST00000469804 hCG_1642624A0A1W2PR95 340 aa29.46■■■□□ 2.31
KPNA4-202ENST00000469804 IGHA2P01877 340 aa29.46■■■□□ 2.31
KPNA4-202ENST00000469804 OLFML2BQ68BL8 750 aa29.46■■■□□ 2.31
KPNA4-202ENST00000469804 PFASO15067 1338 aa29.45■■■□□ 2.31
KPNA4-202ENST00000469804 NID2Q14112 1375 aa29.45■■■□□ 2.31
KPNA4-202ENST00000469804 PNMA6FA0A0J9YX94 578 aa29.45■■■□□ 2.31
KPNA4-202ENST00000469804 PTPDC1A2A3K4 754 aa29.45■■■□□ 2.31
KPNA4-202ENST00000469804 POTEB2H3BUK9 544 aa29.45■■■□□ 2.31
KPNA4-202ENST00000469804 SMARCA1P28370 1054 aa29.45■■■□□ 2.31
KPNA4-202ENST00000469804 RCAN1P53805 252 aa29.45■■■□□ 2.31
KPNA4-202ENST00000469804 BAATQ14032 418 aaPredicted RBP29.45■■■□□ 2.31
KPNA4-202ENST00000469804 MAP3K21Q5TCX8 1036 aa29.45■■■□□ 2.31
KPNA4-202ENST00000469804 FAM133AQ8N9E0 248 aa29.45■■■□□ 2.31
KPNA4-202ENST00000469804 TBC1D5Q92609 795 aa29.45■■■□□ 2.31
KPNA4-202ENST00000469804 RRP36Q96EU6 259 aaKnown RBP29.45■■■□□ 2.31
KPNA4-202ENST00000469804 C22orf23Q9BZE7 217 aa29.45■■■□□ 2.31
KPNA4-202ENST00000469804 POTEFA5A3E0 1075 aa29.44■■■□□ 2.3
KPNA4-202ENST00000469804 ADD1P35611 737 aaKnown RBP29.44■■■□□ 2.3
KPNA4-202ENST00000469804 MFSD14CQ5VZR4 134 aa29.44■■■□□ 2.3
KPNA4-202ENST00000469804 RNF208Q9H0X6 261 aa29.44■■■□□ 2.3
KPNA4-202ENST00000469804 DIS3Q9Y2L1 958 aaKnown RBP29.44■■■□□ 2.3
KPNA4-202ENST00000469804 PCDHA1Q9Y5I3 950 aa29.44■■■□□ 2.3
KPNA4-202ENST00000469804 ASTN1O14525 1302 aa29.44■■■□□ 2.3
KPNA4-202ENST00000469804 SOWAHBA6NEL2 793 aa29.43■■■□□ 2.3
KPNA4-202ENST00000469804 CALML3P27482 149 aa29.43■■■□□ 2.3
KPNA4-202ENST00000469804 PDIA3P30101 505 aaKnown RBP29.43■■■□□ 2.3
KPNA4-202ENST00000469804 CCND3P30281 292 aaPredicted RBP29.43■■■□□ 2.3
KPNA4-202ENST00000469804 EVCP57679 992 aa29.43■■■□□ 2.3
KPNA4-202ENST00000469804 FUT2Q10981 343 aa29.43■■■□□ 2.3
KPNA4-202ENST00000469804 RNF207Q6ZRF8 634 aa29.43■■■□□ 2.3
KPNA4-202ENST00000469804 DDX49Q9Y6V7 483 aaKnown RBP29.43■■■□□ 2.3
KPNA4-202ENST00000469804 OPLAHO14841 1288 aa29.42■■■□□ 2.3
KPNA4-202ENST00000469804 AK2P54819 239 aa29.42■■■□□ 2.3
KPNA4-202ENST00000469804 RPS6P62753 249 aaKnown RBP29.42■■■□□ 2.3
KPNA4-202ENST00000469804 CCT2P78371 535 aaKnown RBP29.42■■■□□ 2.3
KPNA4-202ENST00000469804 PRAMEF19Q5SWL8 479 aa29.42■■■□□ 2.3
KPNA4-202ENST00000469804 TRPV1Q8NER1 839 aa29.42■■■□□ 2.3
KPNA4-202ENST00000469804 KIF2CQ99661 725 aa29.42■■■□□ 2.3
KPNA4-202ENST00000469804 TINF2Q9BSI4 451 aa29.42■■■□□ 2.3
KPNA4-202ENST00000469804 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.42■■■□□ 2.31e-6■■■■■ 33.2
KPNA4-202ENST00000469804 NCOA5Q9HCD5 579 aaKnown RBP29.42■■■□□ 2.3
KPNA4-202ENST00000469804 SEC63Q9UGP8 760 aaKnown RBP29.42■■■□□ 2.3
KPNA4-202ENST00000469804 MRPL11Q9Y3B7 192 aaKnown RBP29.42■■■□□ 2.3
KPNA4-202ENST00000469804 KIAA0100Q14667 2235 aaKnown RBP29.42■■■□□ 2.3
KPNA4-202ENST00000469804 NOL8Q76FK4 1167 aaKnown RBP29.41■■■□□ 2.3
KPNA4-202ENST00000469804 TMEM106CQ9BVX2 250 aa29.41■■■□□ 2.3
KPNA4-202ENST00000469804 HMX1Q9NP08 348 aaPredicted RBP29.41■■■□□ 2.3
KPNA4-202ENST00000469804 RPTORQ8N122 1335 aa29.41■■■□□ 2.3
KPNA4-202ENST00000469804 NEK4P51957 841 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms