RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 A1CFQ9NQ94 594 aaKnown RBP21.79■■□□□ 1.08
TTC28-205ENST00000469670 ERC2O15083 957 aa21.78■■□□□ 1.08
TTC28-205ENST00000469670 FDX1P10109 184 aa21.78■■□□□ 1.08
TTC28-205ENST00000469670 SMPD1P17405 629 aa21.78■■□□□ 1.08
TTC28-205ENST00000469670 PSMC6P62333 389 aa21.78■■□□□ 1.08
TTC28-205ENST00000469670 GIMAP6Q6P9H5 292 aa21.78■■□□□ 1.08
TTC28-205ENST00000469670 ZNF444Q8N0Y2 327 aaPredicted RBP21.78■■□□□ 1.08
TTC28-205ENST00000469670 LRRC47Q8N1G4 583 aaKnown RBP21.78■■□□□ 1.08
TTC28-205ENST00000469670 GMCL1P1Q8NEA9 526 aa21.78■■□□□ 1.08
TTC28-205ENST00000469670 MTMR4Q9NYA4 1195 aa21.78■■□□□ 1.08
TTC28-205ENST00000469670 SYNPO2Q9UMS6 1093 aa21.78■■□□□ 1.08
TTC28-205ENST00000469670 XIRP2A4UGR9 3374 aa21.77■■□□□ 1.08
TTC28-205ENST00000469670 BMP3P12645 472 aa21.77■■□□□ 1.08
TTC28-205ENST00000469670 HOXD11P31277 338 aaPredicted RBP21.77■■□□□ 1.08
TTC28-205ENST00000469670 SLFN13Q68D06 897 aa21.77■■□□□ 1.08
TTC28-205ENST00000469670 AGBL1Q96MI9 1066 aa21.77■■□□□ 1.08
TTC28-205ENST00000469670 PDGFCQ9NRA1 345 aa21.77■■□□□ 1.08
TTC28-205ENST00000469670 RNF146Q9NTX7 359 aa21.77■■□□□ 1.08
TTC28-205ENST00000469670 COG6Q9Y2V7 657 aa21.77■■□□□ 1.08
TTC28-205ENST00000469670 MCM3APO60318 1980 aa21.77■■□□□ 1.08
TTC28-205ENST00000469670 TMEM232C9JQI7 657 aa21.76■■□□□ 1.07
TTC28-205ENST00000469670 RFXAPO00287 272 aa21.76■■□□□ 1.07
TTC28-205ENST00000469670 GTPBP6O43824 516 aaPredicted RBP21.76■■□□□ 1.07
TTC28-205ENST00000469670 PRDM1O75626 825 aa21.76■■□□□ 1.07
TTC28-205ENST00000469670 TTLL1O95922 423 aa21.76■■□□□ 1.07
TTC28-205ENST00000469670 POU3F3P20264 500 aaPredicted RBP21.76■■□□□ 1.07
TTC28-205ENST00000469670 TTLL4Q14679 1199 aa21.76■■□□□ 1.07
TTC28-205ENST00000469670 TMEM67Q5HYA8 995 aa21.76■■□□□ 1.07
TTC28-205ENST00000469670 IQSEC1Q6DN90 963 aa21.76■■□□□ 1.07
TTC28-205ENST00000469670 GBF1Q92538 1859 aa21.76■■□□□ 1.07
TTC28-205ENST00000469670 ZNF287Q9HBT7 754 aa21.76■■□□□ 1.07
TTC28-205ENST00000469670 Q9Y3F1 56 aa21.76■■□□□ 1.07
TTC28-205ENST00000469670 MTCH2Q9Y6C9 303 aa21.76■■□□□ 1.07
TTC28-205ENST00000469670 DDX49Q9Y6V7 483 aaKnown RBP21.76■■□□□ 1.07
TTC28-205ENST00000469670 CA3P07451 260 aa21.75■■□□□ 1.07
TTC28-205ENST00000469670 PFKMP08237 780 aa21.75■■□□□ 1.07
TTC28-205ENST00000469670 TAPT1Q6NXT6 567 aa21.75■■□□□ 1.07
TTC28-205ENST00000469670 ALDH8A1Q9H2A2 487 aaPredicted RBP21.75■■□□□ 1.07
TTC28-205ENST00000469670 ISY1Q9ULR0 285 aaKnown RBP21.75■■□□□ 1.07
TTC28-205ENST00000469670 ZNF536O15090 1300 aa21.75■■□□□ 1.07
TTC28-205ENST00000469670 STAT2P52630 851 aa21.74■■□□□ 1.07
TTC28-205ENST00000469670 TKFCQ3LXA3 575 aa21.74■■□□□ 1.07
TTC28-205ENST00000469670 TMEM63BQ5T3F8 832 aa21.74■■□□□ 1.07
TTC28-205ENST00000469670 EEPD1Q7L9B9 569 aa21.74■■□□□ 1.07
TTC28-205ENST00000469670 FBXO16Q8IX29 292 aaPredicted RBP21.74■■□□□ 1.07
TTC28-205ENST00000469670 TRERF1Q96PN7 1200 aa21.74■■□□□ 1.07
TTC28-205ENST00000469670 EPHX3Q9H6B9 360 aa21.74■■□□□ 1.07
TTC28-205ENST00000469670 CERS4Q9HA82 394 aa21.74■■□□□ 1.07
TTC28-205ENST00000469670 SUPT20HL2P0C7V6 817 aa21.73■■□□□ 1.07
TTC28-205ENST00000469670 ALAS1P13196 640 aa21.73■■□□□ 1.07
TTC28-205ENST00000469670 DEFB128Q7Z7B8 93 aa21.73■■□□□ 1.07
TTC28-205ENST00000469670 FAM160B2Q86V87 743 aa21.73■■□□□ 1.07
TTC28-205ENST00000469670 CHURC1Q8WUH1 139 aa21.73■■□□□ 1.07
TTC28-205ENST00000469670 OSBP2Q969R2 916 aa21.73■■□□□ 1.07
TTC28-205ENST00000469670 LRFN3Q9BTN0 628 aa21.73■■□□□ 1.07
TTC28-205ENST00000469670 EPB41L4AQ9HCS5 686 aaPredicted RBP21.73■■□□□ 1.07
TTC28-205ENST00000469670 TRMT13Q9NUP7 481 aaKnown RBP21.73■■□□□ 1.07
TTC28-205ENST00000469670 COG5Q9UP83 839 aa21.73■■□□□ 1.07
TTC28-205ENST00000469670 HCN4Q9Y3Q4 1203 aa21.73■■□□□ 1.07
TTC28-205ENST00000469670 ARIH1Q9Y4X5 557 aaPredicted RBP21.73■■□□□ 1.07
TTC28-205ENST00000469670 TCF20Q9UGU0 1960 aaKnown RBP21.73■■□□□ 1.07
TTC28-205ENST00000469670 CYP2C9P11712 490 aa21.72■■□□□ 1.07
TTC28-205ENST00000469670 TDO2P48775 406 aa21.72■■□□□ 1.07
TTC28-205ENST00000469670 IKQ13123 557 aaPredicted RBP21.72■■□□□ 1.07
TTC28-205ENST00000469670 STAG1Q8WVM7 1258 aa21.72■■□□□ 1.07
TTC28-205ENST00000469670 REV3LO60673 3130 aa21.71■■□□□ 1.07
TTC28-205ENST00000469670 EPOPA6NHQ4 379 aa21.71■■□□□ 1.07
TTC28-205ENST00000469670 KRT40Q6A162 431 aa21.71■■□□□ 1.07
TTC28-205ENST00000469670 KIAA1211Q6ZU35 1233 aa21.71■■□□□ 1.07
TTC28-205ENST00000469670 NEDD1Q8NHV4 660 aa21.71■■□□□ 1.07
TTC28-205ENST00000469670 APPBP2Q92624 585 aa21.71■■□□□ 1.07
TTC28-205ENST00000469670 GMCL1Q96IK5 515 aa21.71■■□□□ 1.07
TTC28-205ENST00000469670 VTA1Q9NP79 307 aa21.71■■□□□ 1.07
TTC28-205ENST00000469670 ZBTB40Q9NUA8 1239 aa21.71■■□□□ 1.07
TTC28-205ENST00000469670 CYP39A1Q9NYL5 469 aa21.71■■□□□ 1.07
TTC28-205ENST00000469670 TNKSO95271 1327 aa21.71■■□□□ 1.07
TTC28-205ENST00000469670 GPAA1O43292 621 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 TLL1O43897 1013 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 APPP05067 770 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 TSPY3P0CV98 308 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 TSPY8P0CW00 308 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 MS4A1P11836 297 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 ACTN1P12814 892 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 SLC1A4P43007 532 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 MUM1L1Q5H9M0 696 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 KBTBD3Q8NAB2 608 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 CHMP4CQ96CF2 233 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 SLC9A7Q96T83 725 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 POLR3EQ9NVU0 708 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 DDX19BQ9UMR2 479 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 MYH7P12883 1935 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 PLIN4Q96Q06 1357 aa21.7■■□□□ 1.06
TTC28-205ENST00000469670 LRRC37A2A6NM11 1700 aa21.69■■□□□ 1.06
TTC28-205ENST00000469670 GNAT2P19087 354 aa21.69■■□□□ 1.06
TTC28-205ENST00000469670 DUSP28Q4G0W2 176 aa21.69■■□□□ 1.06
TTC28-205ENST00000469670 TMEM31Q5JXX7 168 aa21.69■■□□□ 1.06
TTC28-205ENST00000469670 PHOSPHO2Q8TCD6 241 aa21.69■■□□□ 1.06
TTC28-205ENST00000469670 MORC4Q8TE76 937 aa21.69■■□□□ 1.06
TTC28-205ENST00000469670 ARNTL2Q8WYA1 636 aa21.69■■□□□ 1.06
TTC28-205ENST00000469670 LRRCC1Q9C099 1032 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms