RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 GRIK5Q16478 980 aa13.52□□□□□ -0.25
VARS2-205ENST00000469358 PLCD3Q8N3E9 789 aa13.52□□□□□ -0.25
VARS2-205ENST00000469358 CCDC155Q8N6L0 562 aa13.52□□□□□ -0.25
VARS2-205ENST00000469358 CNOT6LQ96LI5 555 aaKnown RBP13.52□□□□□ -0.25
VARS2-205ENST00000469358 GPR101Q96P66 508 aaPredicted RBP13.52□□□□□ -0.25
VARS2-205ENST00000469358 SLC39A2Q9NP94 309 aa13.52□□□□□ -0.25
VARS2-205ENST00000469358 CAPN6Q9Y6Q1 641 aa13.52□□□□□ -0.25
VARS2-205ENST00000469358 PDS5AQ29RF7 1337 aaKnown RBP13.52□□□□□ -0.25
VARS2-205ENST00000469358 PSMA7O14818 248 aa13.52□□□□□ -0.25
VARS2-205ENST00000469358 ASIC1P78348 528 aa13.52□□□□□ -0.25
VARS2-205ENST00000469358 TRIM14Q14142 442 aa13.52□□□□□ -0.25
VARS2-205ENST00000469358 DIXDC1Q155Q3 683 aa13.52□□□□□ -0.25
VARS2-205ENST00000469358 DNAJC21Q5F1R6 531 aaKnown RBP13.52□□□□□ -0.25
VARS2-205ENST00000469358 FAM71BQ8TC56 605 aa13.52□□□□□ -0.25
VARS2-205ENST00000469358 RASSF4Q9H2L5 321 aa13.52□□□□□ -0.25
VARS2-205ENST00000469358 MYO1AQ9UBC5 1043 aa13.52□□□□□ -0.25
VARS2-205ENST00000469358 NCK2O43639 380 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 TECP42680 631 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 WDR93Q6P2C0 686 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 EXOC1Q9NV70 894 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 CACNA1SQ13698 1873 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 ANKRD36CQ5JPF3 1778 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 CCDC96Q2M329 555 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 GIMAP8Q8ND71 665 aaPredicted RBP13.51□□□□□ -0.25
VARS2-205ENST00000469358 NOC4LQ9BVI4 516 aaKnown RBP13.51□□□□□ -0.25
VARS2-205ENST00000469358 CRNKL1Q9BZJ0 848 aaKnown RBP13.51□□□□□ -0.25
VARS2-205ENST00000469358 ZC3H4Q9UPT8 1303 aaKnown RBP13.51□□□□□ -0.25
VARS2-205ENST00000469358 MOCS3O95396 460 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 SRGNP10124 158 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 TRAPPC10P48553 1259 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 PARP10Q53GL7 1025 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 GLIS3Q8NEA6 775 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 SELENOOQ9BVL4 669 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 TTYH3Q9C0H2 523 aa13.51□□□□□ -0.25
VARS2-205ENST00000469358 CWC15Q9P013 229 aaKnown RBP13.51□□□□□ -0.25
VARS2-205ENST00000469358 DMGDHQ9UI17 866 aaKnown RBP13.51□□□□□ -0.25
VARS2-205ENST00000469358 NHSL1Q5SYE7 1610 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 AGPSO00116 658 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 CCNT1O60563 726 aaKnown RBP13.5□□□□□ -0.25
VARS2-205ENST00000469358 TUBB2AQ13885 445 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 DYMQ7RTS9 669 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 TMC4Q7Z404 712 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 C2CD5Q86YS7 1000 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 TUBB2BQ9BVA1 445 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 GBP3Q9H0R5 595 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 MAD2L2Q9UI95 211 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 ARAP2Q8WZ64 1704 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 ORC4O43929 436 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 PRPF6O94906 941 aaKnown RBP13.5□□□□□ -0.25
VARS2-205ENST00000469358 STIM1Q13586 685 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 UBE4AQ14139 1066 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 MIIPQ5JXC2 388 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 PAPD7Q5XG87 772 aaKnown RBP13.5□□□□□ -0.25
VARS2-205ENST00000469358 ARL6IP4Q66PJ3 421 aaKnown RBP13.5□□□□□ -0.25
VARS2-205ENST00000469358 NFRKBQ6P4R8 1299 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 GJA10Q969M2 543 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 LRRC1Q9BTT6 524 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 KANSL2Q9H9L4 492 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 KBTBD4Q9NVX7 518 aa13.5□□□□□ -0.25
VARS2-205ENST00000469358 KRT86O43790 486 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 ADAMTS2O95450 1211 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 EEF1GP26641 437 aaKnown RBP13.49□□□□□ -0.25
VARS2-205ENST00000469358 CABP7Q86V35 215 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 SH3RF3Q8TEJ3 882 aaPredicted RBP13.49□□□□□ -0.25
VARS2-205ENST00000469358 P2RX5Q93086 422 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 RHOBTB3O94955 611 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 DNM2P50570 870 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 APBA1Q02410 837 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 TRIM9Q9C026 710 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 MKNK2Q9HBH9 465 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 SALL4Q9UJQ4 1053 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 M0R2N6 131 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 KIF5BP33176 963 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 LRRC41Q15345 812 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 KIAA0895Q8NCT3 520 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 AFAP1L1Q8TED9 768 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 SEMA6BQ9H3T3 888 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 THAP9Q9H5L6 903 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 BSDC1Q9NW68 430 aaPredicted RBP13.49□□□□□ -0.25
VARS2-205ENST00000469358 TMEM260Q9NX78 707 aa13.49□□□□□ -0.25
VARS2-205ENST00000469358 A0A1W2PQC6 194 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 CALML3P27482 149 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 HIBADHP31937 336 aaKnown RBP13.48□□□□□ -0.25
VARS2-205ENST00000469358 USP17L2Q6R6M4 530 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 SND1Q7KZF4 910 aaKnown RBP eCLIP13.48□□□□□ -0.25
VARS2-205ENST00000469358 CCDC42Q96M95 316 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 MMRN2Q9H8L6 949 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 ZNHIT6Q9NWK9 470 aaKnown RBP13.48□□□□□ -0.25
VARS2-205ENST00000469358 ARHGAP20Q9P2F6 1191 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 FLT1P17948 1338 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 STXBP3O00186 592 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 IPO7O95373 1038 aaKnown RBP13.48□□□□□ -0.25
VARS2-205ENST00000469358 KRT83P78385 493 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 ENOX2Q16206 610 aaKnown RBP13.48□□□□□ -0.25
VARS2-205ENST00000469358 MEA1Q16626 185 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 CCNI2Q6ZMN8 369 aaPredicted RBP13.48□□□□□ -0.25
VARS2-205ENST00000469358 FBXO33Q7Z6M2 555 aa13.48□□□□□ -0.25
VARS2-205ENST00000469358 DZIP1Q86YF9 867 aaKnown RBP13.48□□□□□ -0.25
VARS2-205ENST00000469358 MAPKAPK5Q8IW41 473 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms