RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 A1BGP04217 495 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 SLC7A5Q01650 507 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 MTMR3Q13615 1198 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 CUL3Q13618 768 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 KCNJ12Q14500 433 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 WDR59Q6PJI9 974 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 NCAPG2Q86XI2 1143 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 NOSTRINQ8IVI9 506 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 NOC3LQ8WTT2 800 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 WASF1Q92558 559 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 RAPGEF5Q92565 580 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 LRRC45Q96CN5 670 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 GORASP1Q9BQQ3 440 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 MMTAG2Q9BU76 263 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 COPRSQ9NQ92 184 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 GJB4Q9NTQ9 266 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 CTNNAL1Q9UBT7 734 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 CTNND2Q9UQB3 1225 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 MAP3K2Q9Y2U5 619 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 MYH10P35580 1976 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 USP6P35125 1406 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 GRID2IPA4D2P6 1211 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 LGALS16A8MUM7 142 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 CLTAP09496 248 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 CDC25AP30304 524 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 ALDH3A1P30838 453 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 HPDP32754 393 aaPredicted RBP9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 ZNF131P52739 623 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 UBXN1Q04323 297 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 DPYDQ12882 1025 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 CFAP221Q4G0U5 840 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 CHST3Q7LGC8 479 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 ZNF513Q8N8E2 541 aaPredicted RBP9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 NCOA7Q8NI08 942 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 CHMP6Q96FZ7 201 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 KAZALD1Q96I82 304 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 LACRTQ9GZZ8 138 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 VPS16Q9H269 839 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 SH2D4AQ9H788 454 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 AATFQ9NY61 560 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 TAB2Q9NYJ8 693 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 NFU1Q9UMS0 254 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 AFF2P51816 1311 aa9.98□□□□□ -0.81
SMARCE1-207ENST00000469334 GPR75-ASB3A0A0A6YYF3 556 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 E7ENQ6 273 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 RNF8O76064 485 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 HEXIM1O94992 359 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 NQO1P15559 274 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 EIF2S2P20042 333 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 PAK1Q13153 545 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 SAFBQ15424 915 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 SPA17Q15506 151 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 LRRC23Q53EV4 343 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 APBB1IPQ7Z5R6 666 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 PNMA8AQ86V59 439 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 LMNTD2Q8IXW0 634 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 GRAMD1CQ8IYS0 662 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 MB21D1Q8N884 522 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 EYA1Q99502 592 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 EPAS1Q99814 870 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 ASB3Q9Y575 518 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 NFAT5O94916 1531 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 MYH7BA7E2Y1 1941 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 NRXN3Q9Y4C0 1643 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 A0A0G2JS52 829 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 NUTM2BA6NNL0 878 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 NUTM2EB1AL46 878 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 FAM153BP0C7A2 387 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 ATP2A2P16615 1042 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 EEF1GP26641 437 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 CARSP49589 748 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 CUL1Q13616 776 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 FAM153CQ494X1 144 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 ANKRD20A2Q5SQ80 823 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 ANKRD20A1Q5TYW2 823 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 ANKRD20A3Q5VUR7 823 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 RALYLQ86SE5 291 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 NBPF15Q8N660 670 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 GBP7Q8N8V2 638 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 ATL2Q8NHH9 583 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 MIPOL1Q8TD10 442 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 PYM1Q9BRP8 204 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 FAM129AQ9BZQ8 928 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 ESF1Q9H501 851 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 NHEJ1Q9H9Q4 299 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 SEC31BQ9NQW1 1179 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 LMCD1Q9NZU5 365 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 FAM153AQ9UHL3 310 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 ANAPC4Q9UJX5 808 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 L3MBTL1Q9Y468 752 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 USP54Q70EL1 1684 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 MAST3O60307 1309 aa9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 PDS5AQ29RF7 1337 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-207ENST00000469334 DIP2CQ9Y2E4 1556 aa9.96□□□□□ -0.81
SMARCE1-207ENST00000469334 LAMB4A4D0S4 1761 aa9.96□□□□□ -0.81
SMARCE1-207ENST00000469334 CASZ1Q86V15 1759 aa9.96□□□□□ -0.81
SMARCE1-207ENST00000469334 MACROD2A1Z1Q3 448 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 RCCD1A6NED2 376 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 H7C1D1 291 aa9.96□□□□□ -0.82
SMARCE1-207ENST00000469334 ATP2C2O75185 946 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms