RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 USP17L18D6R9N7 530 aa19.52■□□□□ 0.72
TRIM46-207ENST00000468878 USP17L22D6RA61 530 aa19.52■□□□□ 0.72
TRIM46-207ENST00000468878 USP17L17D6RBQ6 530 aa19.52■□□□□ 0.72
TRIM46-207ENST00000468878 USP17L19D6RCP7 530 aa19.52■□□□□ 0.72
TRIM46-207ENST00000468878 USP17L20D6RJB6 530 aa19.52■□□□□ 0.72
TRIM46-207ENST00000468878 USP17L24Q0WX57 530 aa19.52■□□□□ 0.72
TRIM46-207ENST00000468878 USP17L6PQ6QN14 398 aa19.52■□□□□ 0.72
TRIM46-207ENST00000468878 DDX41Q9UJV9 622 aaKnown RBP19.52■□□□□ 0.72
TRIM46-207ENST00000468878 MYH7P12883 1935 aa19.52■□□□□ 0.71
TRIM46-207ENST00000468878 STXBP3O00186 592 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 GDF11O95390 407 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 LONP1P36776 959 aaKnown RBP19.51■□□□□ 0.71
TRIM46-207ENST00000468878 GABPB1Q06547 395 aaPredicted RBP19.51■□□□□ 0.71
TRIM46-207ENST00000468878 NLRC4Q9NPP4 1024 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 XIRP1Q702N8 1843 aaKnown RBP19.51■□□□□ 0.71
TRIM46-207ENST00000468878 CTAGE9A4FU28 777 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 BMS1Q14692 1282 aaKnown RBP19.51■□□□□ 0.71
TRIM46-207ENST00000468878 GRM4Q14833 912 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 TDRD12Q587J7 1177 aaKnown RBP19.51■□□□□ 0.71
TRIM46-207ENST00000468878 SLC30A10Q6XR72 485 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 TBC1D16Q8TBP0 767 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 AGPAT5Q9NUQ2 364 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 BARHL2Q9NY43 387 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 FAM237AA0A1B0GTK4 181 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 CHMP4BP1P59074 171 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 KCTD19Q17RG1 926 aaPredicted RBP19.51■□□□□ 0.71
TRIM46-207ENST00000468878 PDXDC2PQ6P474 469 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 TMEM139Q8IV31 216 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 TUBGCP2Q9BSJ2 902 aa19.51■□□□□ 0.71
TRIM46-207ENST00000468878 RNASE9P60153 205 aaKnown RBP19.5■□□□□ 0.71
TRIM46-207ENST00000468878 SUGCTQ9HAC7 445 aa19.5■□□□□ 0.71
TRIM46-207ENST00000468878 VPS72Q15906 364 aa19.5■□□□□ 0.71
TRIM46-207ENST00000468878 TNFRSF25Q93038 417 aa19.5■□□□□ 0.71
TRIM46-207ENST00000468878 MYH3P11055 1940 aa19.5■□□□□ 0.71
TRIM46-207ENST00000468878 CNTNAP4Q9C0A0 1308 aa19.5■□□□□ 0.71
TRIM46-207ENST00000468878 DOT1LQ8TEK3 1739 aa19.5■□□□□ 0.71
TRIM46-207ENST00000468878 FCHSD1Q86WN1 690 aa19.5■□□□□ 0.71
TRIM46-207ENST00000468878 CCDC102AQ96A19 550 aa19.5■□□□□ 0.71
TRIM46-207ENST00000468878 RTFDC1Q9BY42 306 aaPredicted RBP19.5■□□□□ 0.71
TRIM46-207ENST00000468878 ZNF446Q9NWS9 450 aa19.5■□□□□ 0.71
TRIM46-207ENST00000468878 PCP11498 1178 aaKnown RBP19.49■□□□□ 0.71
TRIM46-207ENST00000468878 NFIAQ12857 509 aa19.49■□□□□ 0.71
TRIM46-207ENST00000468878 TMEM266Q2M3C6 531 aa19.49■□□□□ 0.71
TRIM46-207ENST00000468878 KRT26Q7Z3Y9 468 aa19.49■□□□□ 0.71
TRIM46-207ENST00000468878 CCDC155Q8N6L0 562 aa19.49■□□□□ 0.71
TRIM46-207ENST00000468878 PARD6BQ9BYG5 372 aa19.49■□□□□ 0.71
TRIM46-207ENST00000468878 NKRFO15226 690 aaKnown RBP eCLIP19.49■□□□□ 0.71
TRIM46-207ENST00000468878 MYO1BO43795 1136 aa19.49■□□□□ 0.71
TRIM46-207ENST00000468878 ERVK-24P63145 666 aa19.49■□□□□ 0.71
TRIM46-207ENST00000468878 SBK1Q52WX2 424 aa19.49■□□□□ 0.71
TRIM46-207ENST00000468878 ARFGAP3Q9NP61 516 aa19.49■□□□□ 0.71
TRIM46-207ENST00000468878 ABHD10Q9NUJ1 306 aa19.49■□□□□ 0.71
TRIM46-207ENST00000468878 DAGLAQ9Y4D2 1042 aa19.49■□□□□ 0.71
TRIM46-207ENST00000468878 USP17L10C9JJH3 530 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 MEIS1O00470 390 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 GYS1P13807 737 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 CACNA2D4Q7Z3S7 1137 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 CNOT6LQ96LI5 555 aaKnown RBP19.48■□□□□ 0.71
TRIM46-207ENST00000468878 ADCY7P51828 1080 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 UBXN2AP68543 259 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 SPAG1Q07617 926 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 SV2BQ7L1I2 683 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 GOLGA1Q92805 767 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 GJD4Q96KN9 370 aaPredicted RBP19.48■□□□□ 0.71
TRIM46-207ENST00000468878 MTA3Q9BTC8 594 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 RWDD2AQ9UIY3 292 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 AFF2P51816 1311 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 GOLGA6L9A6NEM1 432 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 EPS15P42566 896 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 RCAN1P53805 252 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 E2F4Q16254 413 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 CCDC40Q4G0X9 1142 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 NT5DC1Q5TFE4 455 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 KRT79Q5XKE5 535 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 ANKRD40Q6AI12 368 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 GLIS3Q8NEA6 775 aa19.48■□□□□ 0.71
TRIM46-207ENST00000468878 SMCR8Q8TEV9 937 aaPredicted RBP19.48■□□□□ 0.71
TRIM46-207ENST00000468878 EPN1Q9Y6I3 576 aaPredicted RBP19.48■□□□□ 0.71
TRIM46-207ENST00000468878 ABCC6O95255 1503 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 ATP2B4P23634 1241 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 TRAPPC10P48553 1259 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 NAALADL2Q58DX5 795 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 CYP26C1Q6V0L0 522 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 NUDT12Q9BQG2 462 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 QTRT2Q9H974 415 aaKnown RBP19.47■□□□□ 0.71
TRIM46-207ENST00000468878 PKD2L1Q9P0L9 805 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 ROBO1Q9Y6N7 1651 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 PHLPP2Q6ZVD8 1323 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 SLC37A4O43826 429 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 AKR1B10O60218 316 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 CYP4A11Q02928 519 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 KRT25Q7Z3Z0 450 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 DDX4Q9NQI0 724 aaKnown RBP19.47■□□□□ 0.71
TRIM46-207ENST00000468878 DUSP10Q9Y6W6 482 aa19.47■□□□□ 0.71
TRIM46-207ENST00000468878 TRAF5O00463 557 aa19.46■□□□□ 0.71
TRIM46-207ENST00000468878 TBX2Q13207 712 aaPredicted RBP19.46■□□□□ 0.71
TRIM46-207ENST00000468878 C2CD5Q86YS7 1000 aa19.46■□□□□ 0.71
TRIM46-207ENST00000468878 ZFPM1Q8IX07 1006 aa19.46■□□□□ 0.71
TRIM46-207ENST00000468878 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.46■□□□□ 0.71
TRIM46-207ENST00000468878 PPEF1O14829 653 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms