RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 KIR3DS1Q14943 382 aa7.68□□□□□ -1.18
LSM5-209ENST00000468872 PPP2R5EQ16537 467 aa7.68□□□□□ -1.18
LSM5-209ENST00000468872 RTP2Q5QGT7 225 aa7.68□□□□□ -1.18
LSM5-209ENST00000468872 MKL1Q969V6 931 aa7.68□□□□□ -1.18
LSM5-209ENST00000468872 SLC12A9Q9BXP2 914 aa7.68□□□□□ -1.18
LSM5-209ENST00000468872 GP6Q9HCN6 339 aa7.68□□□□□ -1.18
LSM5-209ENST00000468872 FAM86C1Q9NVL1 165 aa7.68□□□□□ -1.18
LSM5-209ENST00000468872 A0A1W2PQ45 241 aaPredicted RBP7.67□□□□□ -1.18
LSM5-209ENST00000468872 A0A1W2PQY0 241 aa7.67□□□□□ -1.18
LSM5-209ENST00000468872 U2SURPO15042 1029 aaKnown RBP7.67□□□□□ -1.18
LSM5-209ENST00000468872 CD247P20963 164 aa7.67□□□□□ -1.18
LSM5-209ENST00000468872 ZNF445P59923 1031 aa7.67□□□□□ -1.18
LSM5-209ENST00000468872 ERVFRD-1P60508 538 aa7.67□□□□□ -1.18
LSM5-209ENST00000468872 DDR2Q16832 855 aa7.67□□□□□ -1.18
LSM5-209ENST00000468872 NOL9Q5SY16 702 aaKnown RBP7.67□□□□□ -1.18
LSM5-209ENST00000468872 LARP1BQ659C4 914 aaKnown RBP7.67□□□□□ -1.18
LSM5-209ENST00000468872 CWF19L1Q69YN2 538 aaKnown RBP7.67□□□□□ -1.18
LSM5-209ENST00000468872 TMEM52Q8NDY8 209 aa7.67□□□□□ -1.18
LSM5-209ENST00000468872 MICAL1Q8TDZ2 1067 aa7.67□□□□□ -1.18
LSM5-209ENST00000468872 ST7Q9NRC1 585 aa7.67□□□□□ -1.18
LSM5-209ENST00000468872 ZNF214Q9UL59 606 aaPredicted RBP7.67□□□□□ -1.18
LSM5-209ENST00000468872 MSRB2Q9Y3D2 182 aa7.67□□□□□ -1.18
LSM5-209ENST00000468872 H0Y8X5 98 aa7.66□□□□□ -1.18
LSM5-209ENST00000468872 PRKCAP17252 672 aa7.66□□□□□ -1.18
LSM5-209ENST00000468872 SRSF3P84103 164 aaKnown RBP7.66□□□□□ -1.18
LSM5-209ENST00000468872 RASA3Q14644 834 aa7.66□□□□□ -1.18
LSM5-209ENST00000468872 NFE2L2Q16236 605 aa7.66□□□□□ -1.18
LSM5-209ENST00000468872 BRF1Q92994 677 aa7.66□□□□□ -1.18
LSM5-209ENST00000468872 MBD1Q9UIS9 605 aaPredicted RBP7.66□□□□□ -1.18
LSM5-209ENST00000468872 ZNF451Q9Y4E5 1061 aa7.66□□□□□ -1.18
LSM5-209ENST00000468872 FHOD1Q9Y613 1164 aa7.66□□□□□ -1.18
LSM5-209ENST00000468872 FAM221BA6H8Z2 402 aa7.65□□□□□ -1.18
LSM5-209ENST00000468872 GSTM1P09488 218 aa7.65□□□□□ -1.18
LSM5-209ENST00000468872 ARL4AP40617 200 aa7.65□□□□□ -1.18
LSM5-209ENST00000468872 YBX1P67809 324 aaKnown RBP7.65□□□□□ -1.18
LSM5-209ENST00000468872 FIBCD1Q8N539 461 aa7.65□□□□□ -1.18
LSM5-209ENST00000468872 DEPDC7Q96QD5 511 aa7.65□□□□□ -1.18
LSM5-209ENST00000468872 JMJD8Q96S16 334 aa7.65□□□□□ -1.18
LSM5-209ENST00000468872 SRPK1Q96SB4 655 aaKnown RBP7.65□□□□□ -1.18
LSM5-209ENST00000468872 IRF2BPLQ9H1B7 796 aa7.65□□□□□ -1.18
LSM5-209ENST00000468872 LTBP3Q9NS15 1303 aa7.65□□□□□ -1.18
LSM5-209ENST00000468872 SNTG2Q9NY99 539 aa7.65□□□□□ -1.18
LSM5-209ENST00000468872 ACSL6Q9UKU0 697 aa7.65□□□□□ -1.18
LSM5-209ENST00000468872 B2RBV5 119 aa7.64□□□□□ -1.19
LSM5-209ENST00000468872 VIPR1P32241 457 aa7.64□□□□□ -1.19
LSM5-209ENST00000468872 LAPTM5Q13571 262 aa7.64□□□□□ -1.19
LSM5-209ENST00000468872 FXNQ16595 210 aa7.64□□□□□ -1.19
LSM5-209ENST00000468872 FAM177A1Q8N128 213 aaPredicted RBP7.64□□□□□ -1.19
LSM5-209ENST00000468872 NAT16Q8N8M0 369 aa7.64□□□□□ -1.19
LSM5-209ENST00000468872 MRFAP1L1Q96HT8 127 aa7.64□□□□□ -1.19
LSM5-209ENST00000468872 SIRT5Q9NXA8 310 aa7.64□□□□□ -1.19
LSM5-209ENST00000468872 CNOT6Q9ULM6 557 aaKnown RBP7.64□□□□□ -1.19
LSM5-209ENST00000468872 CCDC85CA6NKD9 419 aa7.63□□□□□ -1.19
LSM5-209ENST00000468872 CBFA2T2O43439 604 aa7.63□□□□□ -1.19
LSM5-209ENST00000468872 GJB6O95452 261 aa7.63□□□□□ -1.19
LSM5-209ENST00000468872 MPOP05164 745 aa7.63□□□□□ -1.19
LSM5-209ENST00000468872 ITGA4P13612 1032 aa7.63□□□□□ -1.19
LSM5-209ENST00000468872 CYP4F8P98187 520 aa7.63□□□□□ -1.19
LSM5-209ENST00000468872 C6orf15Q6UXA7 325 aaPredicted RBP7.63□□□□□ -1.19
LSM5-209ENST00000468872 LRP10Q7Z4F1 713 aa7.63□□□□□ -1.19
LSM5-209ENST00000468872 NUP43Q8NFH3 380 aa7.63□□□□□ -1.19
LSM5-209ENST00000468872 CCDC113Q9H0I3 377 aa7.63□□□□□ -1.19
LSM5-209ENST00000468872 IMPACTQ9P2X3 320 aa7.63□□□□□ -1.19
LSM5-209ENST00000468872 SF3B6Q9Y3B4 125 aaKnown RBP7.63□□□□□ -1.19
LSM5-209ENST00000468872 TBX22Q9Y458 520 aa7.63□□□□□ -1.19
LSM5-209ENST00000468872 CADPSQ9ULU8 1353 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 TLDC2A0PJX2 215 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 ABLIM1O14639 778 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 EPHB3P54753 998 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 SSPNQ14714 243 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 OLFML2BQ68BL8 750 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 JAZF1Q86VZ6 243 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 FAM178BQ8IXR5 827 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 FCRL3Q96P31 734 aaPredicted RBP7.62□□□□□ -1.19
LSM5-209ENST00000468872 HAUS7Q99871 368 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 NOL6Q9H6R4 1146 aaKnown RBP7.62□□□□□ -1.19
LSM5-209ENST00000468872 CNTD2Q9H8S5 307 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 TNFRSF12AQ9NP84 129 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 KLHL14Q9P2G3 628 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 KCTD3Q9Y597 815 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 SLC12A7Q9Y666 1083 aa7.62□□□□□ -1.19
LSM5-209ENST00000468872 A0A087WZG4 1122 aa7.61□□□□□ -1.19
LSM5-209ENST00000468872 FGF10O15520 208 aaPredicted RBP7.61□□□□□ -1.19
LSM5-209ENST00000468872 NOP2P46087 812 aaKnown RBP7.61□□□□□ -1.19
LSM5-209ENST00000468872 TCEAL1Q15170 157 aa7.61□□□□□ -1.19
LSM5-209ENST00000468872 ZNF385BQ569K4 471 aa7.61□□□□□ -1.19
LSM5-209ENST00000468872 HLA-DQA1Q5Y7H0 255 aa7.61□□□□□ -1.19
LSM5-209ENST00000468872 MRM1Q6IN84 353 aaKnown RBP7.61□□□□□ -1.19
LSM5-209ENST00000468872 SIGLEC10Q96LC7 697 aa7.61□□□□□ -1.19
LSM5-209ENST00000468872 KRTAP4-7Q9BYR0 210 aa7.61□□□□□ -1.19
LSM5-209ENST00000468872 PHAXQ9H814 394 aaKnown RBP7.61□□□□□ -1.19
LSM5-209ENST00000468872 PCDHB10Q9UN67 800 aa7.61□□□□□ -1.19
LSM5-209ENST00000468872 TMA7Q9Y2S6 64 aaKnown RBP7.61□□□□□ -1.19
LSM5-209ENST00000468872 NUDT19A8MXV4 375 aa7.6□□□□□ -1.19
LSM5-209ENST00000468872 RFXAPO00287 272 aa7.6□□□□□ -1.19
LSM5-209ENST00000468872 N4BP3O15049 544 aa7.6□□□□□ -1.19
LSM5-209ENST00000468872 PDPK1O15530 556 aa7.6□□□□□ -1.19
LSM5-209ENST00000468872 DDAH1O94760 285 aa7.6□□□□□ -1.19
LSM5-209ENST00000468872 IFNGR1P15260 489 aa7.6□□□□□ -1.19
LSM5-209ENST00000468872 RAB3GAP1Q15042 981 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms