RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 ATP6V1DQ9Y5K8 247 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 FAM155AB1AL88 458 aaPredicted RBP20.09■□□□□ 0.81
RPL39-202ENST00000468844 BTBD19C9JJ37 291 aa20.09■□□□□ 0.81
RPL39-202ENST00000468844 PABPC4Q13310 644 aaKnown RBP eCLIP20.09■□□□□ 0.812e-7■■■■■ 32.4
RPL39-202ENST00000468844 TMEM132BQ14DG7 1078 aa20.09■□□□□ 0.81
RPL39-202ENST00000468844 EARS2Q5JPH6 523 aaKnown RBP20.09■□□□□ 0.81
RPL39-202ENST00000468844 RASGRP4Q8TDF6 673 aa20.09■□□□□ 0.81
RPL39-202ENST00000468844 PTPN18Q99952 460 aa20.09■□□□□ 0.81
RPL39-202ENST00000468844 ADCY7P51828 1080 aa20.08■□□□□ 0.81
RPL39-202ENST00000468844 HERVK_113P62684 666 aa20.08■□□□□ 0.81
RPL39-202ENST00000468844 NOM1Q5C9Z4 860 aaKnown RBP20.08■□□□□ 0.81
RPL39-202ENST00000468844 LBX2Q6XYB7 198 aa20.08■□□□□ 0.81
RPL39-202ENST00000468844 RIC8AQ9NPQ8 531 aa20.08■□□□□ 0.81
RPL39-202ENST00000468844 DOCK3Q8IZD9 2030 aa20.08■□□□□ 0.81
RPL39-202ENST00000468844 FAM205CA6NFA0 338 aa20.08■□□□□ 0.8
RPL39-202ENST00000468844 OAZ1P54368 228 aa20.08■□□□□ 0.8
RPL39-202ENST00000468844 DNM1Q05193 864 aaKnown RBP20.08■□□□□ 0.8
RPL39-202ENST00000468844 TRAF1Q13077 416 aa20.08■□□□□ 0.8
RPL39-202ENST00000468844 MYSM1Q5VVJ2 828 aa20.08■□□□□ 0.8
RPL39-202ENST00000468844 CLEC17AQ6ZS10 378 aa20.08■□□□□ 0.8
RPL39-202ENST00000468844 FAM43AQ8N2R8 423 aa20.08■□□□□ 0.8
RPL39-202ENST00000468844 CUL5Q93034 780 aa20.08■□□□□ 0.8
RPL39-202ENST00000468844 PSTPIP2Q9H939 334 aa20.08■□□□□ 0.8
RPL39-202ENST00000468844 PCDHA6Q9UN73 950 aa20.08■□□□□ 0.8
RPL39-202ENST00000468844 CTDP1Q9Y5B0 961 aaPredicted RBP20.08■□□□□ 0.8
RPL39-202ENST00000468844 PCDHA8Q9Y5H6 950 aa20.08■□□□□ 0.8
RPL39-202ENST00000468844 ABCB11O95342 1321 aa20.07■□□□□ 0.8
RPL39-202ENST00000468844 TESPA1A2RU30 521 aaPredicted RBP20.07■□□□□ 0.8
RPL39-202ENST00000468844 PDHXO00330 501 aa20.07■□□□□ 0.8
RPL39-202ENST00000468844 ATP2A1O14983 1001 aa20.07■□□□□ 0.8
RPL39-202ENST00000468844 PEX10O60683 326 aa20.07■□□□□ 0.8
RPL39-202ENST00000468844 BAG4O95429 457 aaKnown RBP20.07■□□□□ 0.8
RPL39-202ENST00000468844 ANKRD23Q86SG2 305 aa20.07■□□□□ 0.8
RPL39-202ENST00000468844 REXO1Q8N1G1 1221 aaKnown RBP20.07■□□□□ 0.8
RPL39-202ENST00000468844 SLC45A1Q9Y2W3 748 aa20.07■□□□□ 0.8
RPL39-202ENST00000468844 CYP2C8P10632 490 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 OSBPP22059 807 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 CLK2P49760 499 aaKnown RBP20.06■□□□□ 0.8
RPL39-202ENST00000468844 BICD2Q8TD16 824 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 CCDC102AQ96A19 550 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 BTBD7Q9P203 1132 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 PNMA3Q9UL41 463 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 RIPK3Q9Y572 518 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 MEIS2O14770 477 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 ALAS1P13196 640 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 APLP1P51693 650 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 UBE2SQ16763 222 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 SNRNP48Q6IEG0 339 aaKnown RBP20.06■□□□□ 0.8
RPL39-202ENST00000468844 USP17L6PQ6QN14 398 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 MB21D1Q8N884 522 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 TEX13BQ9BXU2 312 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 CREBZFQ9NS37 354 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 BIN2Q9UBW5 565 aaPredicted RBP20.06■□□□□ 0.8
RPL39-202ENST00000468844 CENPFP49454 3210 aa20.06■□□□□ 0.8
RPL39-202ENST00000468844 PLXNB2O15031 1838 aa20.05■□□□□ 0.8
RPL39-202ENST00000468844 MANSC4A6NHS7 340 aaPredicted RBP20.05■□□□□ 0.8
RPL39-202ENST00000468844 MRPL12P52815 198 aaKnown RBP20.05■□□□□ 0.8
RPL39-202ENST00000468844 PIK3AP1Q6ZUJ8 805 aa20.05■□□□□ 0.8
RPL39-202ENST00000468844 HOMER2Q9NSB8 354 aa20.05■□□□□ 0.8
RPL39-202ENST00000468844 MRPL11Q9Y3B7 192 aaKnown RBP20.05■□□□□ 0.8
RPL39-202ENST00000468844 IGF2BP3O00425 579 aaKnown RBP eCLIP20.04■□□□□ 0.88e-7■■■■□ 20.6
RPL39-202ENST00000468844 JAKMIP3Q5VZ66 844 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 CYP4F22Q6NT55 531 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 TBC1D5Q92609 795 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 FTOQ9C0B1 505 aaKnown RBP eCLIP20.04■□□□□ 0.8
RPL39-202ENST00000468844 GLT8D2Q9H1C3 349 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 TXNRD2Q9NNW7 524 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 TMEM260Q9NX78 707 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 PLXNA1Q9UIW2 1896 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 NFIBO00712 420 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 CNMDO75829 334 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 STAT3P40763 770 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 PLS1Q14651 629 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 MUM1L1Q5H9M0 696 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 CLEC4DQ8WXI8 215 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 GBP4Q96PP9 640 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 PAGR1Q9BTK6 254 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 PNMA2Q9UL42 364 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 CNPY2Q9Y2B0 182 aa20.04■□□□□ 0.8
RPL39-202ENST00000468844 TOB1P50616 345 aaPredicted RBP20.03■□□□□ 0.8
RPL39-202ENST00000468844 PAXIP1Q6ZW49 1069 aaPredicted RBP20.03■□□□□ 0.8
RPL39-202ENST00000468844 PGBD1Q96JS3 809 aa20.03■□□□□ 0.8
RPL39-202ENST00000468844 TRERF1Q96PN7 1200 aa20.03■□□□□ 0.8
RPL39-202ENST00000468844 USP28Q96RU2 1077 aa20.03■□□□□ 0.8
RPL39-202ENST00000468844 ZIC5Q96T25 663 aa20.03■□□□□ 0.8
RPL39-202ENST00000468844 RBPJLQ9UBG7 517 aa20.03■□□□□ 0.8
RPL39-202ENST00000468844 KIAA1217Q5T5P2 1943 aa20.03■□□□□ 0.8
RPL39-202ENST00000468844 CCDC194A0A1B0GVG4 234 aa20.02■□□□□ 0.8
RPL39-202ENST00000468844 RASSF10A6NK89 507 aa20.02■□□□□ 0.8
RPL39-202ENST00000468844 PIK3CDO00329 1044 aa20.02■□□□□ 0.8
RPL39-202ENST00000468844 CFBP00751 764 aa20.02■□□□□ 0.8
RPL39-202ENST00000468844 KRT85P78386 507 aa20.02■□□□□ 0.8
RPL39-202ENST00000468844 GRM1Q13255 1194 aa20.02■□□□□ 0.8
RPL39-202ENST00000468844 SMCR8Q8TEV9 937 aaPredicted RBP20.02■□□□□ 0.8
RPL39-202ENST00000468844 SPATC1LQ9H0A9 340 aa20.02■□□□□ 0.8
RPL39-202ENST00000468844 RNF146Q9NTX7 359 aa20.02■□□□□ 0.8
RPL39-202ENST00000468844 TFIP11Q9UBB9 837 aaKnown RBP20.02■□□□□ 0.8
RPL39-202ENST00000468844 MCM3APO60318 1980 aa20.02■□□□□ 0.8
RPL39-202ENST00000468844 NCLP19338 710 aaKnown RBP20.02■□□□□ 0.79
RPL39-202ENST00000468844 HOXA13P31271 388 aaPredicted RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms