RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 NAALADL2Q58DX5 795 aa6.19□□□□□ -1.42
GPNMB-207ENST00000468723 TMEM132EQ6IEE7 984 aa6.19□□□□□ -1.42
GPNMB-207ENST00000468723 ANKS3Q6ZW76 656 aa6.19□□□□□ -1.42
GPNMB-207ENST00000468723 KCNN1Q92952 543 aa6.19□□□□□ -1.42
GPNMB-207ENST00000468723 RCC1LQ96I51 464 aaKnown RBP6.19□□□□□ -1.42
GPNMB-207ENST00000468723 CRTAC1Q9NQ79 661 aa6.19□□□□□ -1.42
GPNMB-207ENST00000468723 R3HCC1Q9Y3T6 440 aaKnown RBP6.19□□□□□ -1.42
GPNMB-207ENST00000468723 MYOCOSA0A1B0GUC4 107 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 C2orf71A6NGG8 1288 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 TBC1D8O95759 1140 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 TMEM253P0C7T8 217 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 MSL3P1P0C860 447 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 C1QTNF9P0C862 333 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 NAT2P11245 290 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 SEPHS1P49903 392 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 SV2CQ496J9 727 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 BVESQ8NE79 360 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 GMLQ99445 158 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 SGPP1Q9BX95 441 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 MCOLN1Q9GZU1 580 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 ZNF552Q9H707 407 aaPredicted RBP6.18□□□□□ -1.42
GPNMB-207ENST00000468723 EMC9Q9Y3B6 208 aa6.18□□□□□ -1.42
GPNMB-207ENST00000468723 ETV2O00321 342 aaPredicted RBP6.17□□□□□ -1.42
GPNMB-207ENST00000468723 NOP56O00567 594 aaKnown RBP6.17□□□□□ -1.42
GPNMB-207ENST00000468723 GJB6O95452 261 aa6.17□□□□□ -1.42
GPNMB-207ENST00000468723 ARL4AP40617 200 aa6.17□□□□□ -1.42
GPNMB-207ENST00000468723 RAP1GAPP47736 663 aa6.17□□□□□ -1.42
GPNMB-207ENST00000468723 ZC3H6P61129 1189 aaKnown RBP6.17□□□□□ -1.42
GPNMB-207ENST00000468723 MVKQ03426 396 aa6.17□□□□□ -1.42
GPNMB-207ENST00000468723 LAPTM5Q13571 262 aa6.17□□□□□ -1.42
GPNMB-207ENST00000468723 EEF1DP3Q658K8 133 aa6.17□□□□□ -1.42
GPNMB-207ENST00000468723 MRM1Q6IN84 353 aaKnown RBP6.17□□□□□ -1.42
GPNMB-207ENST00000468723 CYP2R1Q6VVX0 501 aa6.17□□□□□ -1.42
GPNMB-207ENST00000468723 CPNE8Q86YQ8 564 aa6.17□□□□□ -1.42
GPNMB-207ENST00000468723 LRP2BPQ9P2M1 347 aa6.17□□□□□ -1.42
GPNMB-207ENST00000468723 ACSL6Q9UKU0 697 aa6.17□□□□□ -1.42
GPNMB-207ENST00000468723 BACE2Q9Y5Z0 518 aa6.17□□□□□ -1.42
GPNMB-207ENST00000468723 SHROOM4Q9ULL8 1493 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 A0A1W2PQJ5 194 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 NUDT19A8MXV4 375 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 NFIBO00712 420 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 TBX1O43435 398 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 SUSD5O60279 629 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 KRT1P04264 644 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 TACR1P25103 407 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 ZNF143P52747 638 aaPredicted RBP6.16□□□□□ -1.42
GPNMB-207ENST00000468723 GRB10Q13322 594 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 RCSD1Q6JBY9 416 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 POMZP3Q6PJE2 187 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 ATG14Q6ZNE5 492 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 TRIM59Q8IWR1 403 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 CELF2-AS1Q8N7Q2 184 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 SLC26A8Q96RN1 970 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 PPP1R16BQ96T49 567 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 GPRC5CQ9NQ84 441 aa6.16□□□□□ -1.42
GPNMB-207ENST00000468723 L1CAMP32004 1257 aa6.15□□□□□ -1.42
GPNMB-207ENST00000468723 SRSF3P84103 164 aaKnown RBP6.15□□□□□ -1.42
GPNMB-207ENST00000468723 SCRN1Q12765 414 aa6.15□□□□□ -1.42
GPNMB-207ENST00000468723 RAB3GAP1Q15042 981 aa6.15□□□□□ -1.42
GPNMB-207ENST00000468723 GTF2IRD2BQ6EKJ0 949 aa6.15□□□□□ -1.42
GPNMB-207ENST00000468723 GTF2IRD2Q86UP8 949 aa6.15□□□□□ -1.42
GPNMB-207ENST00000468723 BTN2A2Q8WVV5 523 aa6.15□□□□□ -1.42
GPNMB-207ENST00000468723 MRGPRX3Q96LB0 322 aa6.15□□□□□ -1.42
GPNMB-207ENST00000468723 CLEC1BQ9P126 229 aa6.15□□□□□ -1.42
GPNMB-207ENST00000468723 USP35Q9P2H5 1018 aa6.15□□□□□ -1.42
GPNMB-207ENST00000468723 NPHP3-ACAD11A0A0J9YXS1 232 aa6.14□□□□□ -1.43
GPNMB-207ENST00000468723 TSPAN15O95858 294 aa6.14□□□□□ -1.43
GPNMB-207ENST00000468723 MPOP05164 745 aa6.14□□□□□ -1.43
GPNMB-207ENST00000468723 ITGAVP06756 1048 aa6.14□□□□□ -1.43
GPNMB-207ENST00000468723 PAMP19021 973 aa6.14□□□□□ -1.43
GPNMB-207ENST00000468723 VIPR1P32241 457 aa6.14□□□□□ -1.43
GPNMB-207ENST00000468723 ERVFRD-1P60508 538 aa6.14□□□□□ -1.43
GPNMB-207ENST00000468723 CRACR2BQ8N4Y2 399 aaPredicted RBP6.14□□□□□ -1.43
GPNMB-207ENST00000468723 TNFRSF12AQ9NP84 129 aa6.14□□□□□ -1.43
GPNMB-207ENST00000468723 KLHL14Q9P2G3 628 aa6.14□□□□□ -1.43
GPNMB-207ENST00000468723 PPP1R1BQ9UD71 204 aaPredicted RBP6.14□□□□□ -1.43
GPNMB-207ENST00000468723 DBX1A6NMT0 343 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 NPIPB6E9PJ23 425 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 KLF4O43474 513 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 PEX10O60683 326 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 PLS3P13797 630 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 DLG4P78352 724 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 BICRALQ6AI39 1079 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 ZNF227Q86WZ6 799 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 ANKLE2Q86XL3 938 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 TANGO6Q9C0B7 1094 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 RXFP1Q9HBX9 757 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 PDLIM7Q9NR12 457 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 SIRT5Q9NXA8 310 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 GULP1Q9UBP9 304 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 SMG5Q9UPR3 1016 aaKnown RBP6.13□□□□□ -1.43
GPNMB-207ENST00000468723 RWDD3Q9Y3V2 267 aa6.13□□□□□ -1.43
GPNMB-207ENST00000468723 TEX51A0A1B0GUA7 166 aa6.12□□□□□ -1.43
GPNMB-207ENST00000468723 TCAF2A6NFQ2 919 aa6.12□□□□□ -1.43
GPNMB-207ENST00000468723 PPP1R11O60927 126 aaPredicted RBP6.12□□□□□ -1.43
GPNMB-207ENST00000468723 STK10O94804 968 aaKnown RBP6.12□□□□□ -1.43
GPNMB-207ENST00000468723 THBDP07204 575 aa6.12□□□□□ -1.43
GPNMB-207ENST00000468723 ECI1P42126 302 aa6.12□□□□□ -1.43
GPNMB-207ENST00000468723 SF1Q15637 639 aaKnown RBP6.12□□□□□ -1.43
GPNMB-207ENST00000468723 DDR2Q16832 855 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms