RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TMEM74Q96NL1 305 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 MEIS3Q99687 375 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 CEP41Q9BYV8 373 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 ZC3H12CQ9C0D7 883 aaKnown RBP5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 CHMP4BQ9H444 224 aaKnown RBP5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 SUGCTQ9HAC7 445 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 CYP4F12Q9HCS2 524 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 KBTBD4Q9NVX7 518 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 TFCP2L1Q9NZI6 479 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 SRP68Q9UHB9 627 aaKnown RBP5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 BTAF1O14981 1849 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 CNTNAP4Q9C0A0 1308 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 ZNF862O60290 1169 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 ALDH1L1O75891 902 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 CAMTA2O94983 1202 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 GNAI2P04899 355 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 IGKV5-2P06315 115 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 GNAI3P08754 354 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 UBTFL1P0CB47 393 aaPredicted RBP5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 TFE3P19532 575 aaPredicted RBP5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 NOS3P29474 1203 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 GBP2P32456 591 aaPredicted RBP5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 IREB2P48200 963 aaKnown RBP5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 TCIRG1Q13488 830 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 KIF4BQ2VIQ3 1234 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 ERICH6BQ5W0A0 696 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 FDX2Q6P4F2 183 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 METTL16Q86W50 562 aaKnown RBP5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 AMIGO3Q86WK7 504 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 LINS1Q8NG48 757 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 WFDC12Q8WWY7 111 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 GAL3ST3Q96A11 431 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 CAMKK2Q96RR4 588 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 WDR18Q9BV38 432 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 USP44Q9H0E7 712 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 COPRSQ9NQ92 184 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 IGSF5Q9NSI5 407 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 CWC25Q9NXE8 425 aaPredicted RBP5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 STK32BQ9NY57 414 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 NIP7Q9Y221 180 aaKnown RBP eCLIP5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 TLR6Q9Y2C9 796 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 LRRFIP2Q9Y608 721 aaKnown RBP5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 NHSQ6T4R5 1651 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 PAPPAQ13219 1627 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 SBF2Q86WG5 1849 aa5.07□□□□□ -1.6
TMEM39A-204ENST00000468545 UBR2Q8IWV8 1755 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 COL15A1P39059 1388 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 ERVV-1B6SEH8 477 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 GRM8O00222 908 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 NPHP1O15259 732 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 AOC2O75106 756 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 ALX3O95076 343 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 TIAF1O95411 115 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 IGHDP01880 384 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 NBPF7P0C2Y1 421 aaPredicted RBP5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 GLB1P16278 677 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 HMGB2P26583 209 aaKnown RBP5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 LMNB2Q03252 620 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 GCKRQ14397 625 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 ZNF827Q17R98 1081 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 HSP90AB3PQ58FF7 597 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 SUSD4Q5VX71 490 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 USP48Q86UV5 1035 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 COL23A1Q86Y22 540 aaPredicted RBP5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 TRIM42Q8IWZ5 723 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 SYNE4Q8N205 404 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 GPBAR1Q8TDU6 330 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 FAM89AQ96GI7 184 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 SUCLG2Q96I99 432 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 ISCA1Q9BUE6 129 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 MIR1-1HGQ9H1L0 117 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 RWDD1Q9H446 243 aaPredicted RBP5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 RAD18Q9NS91 495 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 ZBTB40Q9NUA8 1239 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 NARFQ9UHQ1 456 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 TRMT112Q9UI30 125 aaKnown RBP5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 ZNF652Q9Y2D9 606 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 TJP1Q07157 1748 aa5.06□□□□□ -1.6
TMEM39A-204ENST00000468545 PF4P02776 101 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 SLFN14P0C7P3 912 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 ADH5P11766 374 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 LIG1P18858 919 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 GATA4P43694 442 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 ATP8B2P98198 1209 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 CAMK2GQ13555 558 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 SEPT6Q14141 434 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 SLC15A2Q16348 729 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 UVSSAQ2YD98 709 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 ZNF394Q53GI3 561 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 TBC1D9BQ66K14 1250 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 UBE3BQ7Z3V4 1068 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 CCDC84Q86UT8 332 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 NLRP10Q86W26 655 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 NT5DC4Q86YG4 428 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 ZNF34Q8IZ26 560 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 CCDC191Q8NCU4 936 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 WDR89Q96FK6 387 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 MEGF10Q96KG7 1140 aa5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 UTP14AQ9BVJ6 771 aaKnown RBP5.05□□□□□ -1.6
TMEM39A-204ENST00000468545 KCNQ5Q9NR82 932 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms