RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 TMEM232C9JQI7 657 aa17.21■□□□□ 0.35
COL16A1-208ENST00000468459 SNAI1O95863 264 aaPredicted RBP17.21■□□□□ 0.35
COL16A1-208ENST00000468459 GOLGA8HP0CJ92 632 aa17.21■□□□□ 0.35
COL16A1-208ENST00000468459 SNHG28P0DPA3 235 aa17.21■□□□□ 0.35
COL16A1-208ENST00000468459 OAZ1P54368 228 aa17.21■□□□□ 0.35
COL16A1-208ENST00000468459 MDM2Q00987 491 aaPredicted RBP17.21■□□□□ 0.35
COL16A1-208ENST00000468459 RAB11FIP4Q86YS3 637 aa17.21■□□□□ 0.35
COL16A1-208ENST00000468459 KIFC2Q96AC6 838 aa17.21■□□□□ 0.35
COL16A1-208ENST00000468459 TMEM87BQ96K49 555 aa17.21■□□□□ 0.35
COL16A1-208ENST00000468459 FGD4Q96M96 766 aa17.21■□□□□ 0.35
COL16A1-208ENST00000468459 RAVER2Q9HCJ3 691 aaKnown RBP17.21■□□□□ 0.35
COL16A1-208ENST00000468459 KBTBD13C9JR72 458 aa17.2■□□□□ 0.34
COL16A1-208ENST00000468459 EIF5BO60841 1220 aaKnown RBP17.2■□□□□ 0.34
COL16A1-208ENST00000468459 ZBED4O75132 1171 aa17.2■□□□□ 0.34
COL16A1-208ENST00000468459 PSMA5P28066 241 aa17.2■□□□□ 0.34
COL16A1-208ENST00000468459 SLC16A2P36021 539 aa17.2■□□□□ 0.34
COL16A1-208ENST00000468459 ADCYAP1R1P41586 468 aa17.2■□□□□ 0.34
COL16A1-208ENST00000468459 ZNF543Q08ER8 600 aa17.2■□□□□ 0.34
COL16A1-208ENST00000468459 CPXCR1Q8N123 301 aa17.2■□□□□ 0.34
COL16A1-208ENST00000468459 CPVLQ9H3G5 476 aa17.2■□□□□ 0.34
COL16A1-208ENST00000468459 ZSWIM6Q9HCJ5 1215 aa17.2■□□□□ 0.34
COL16A1-208ENST00000468459 PHF24Q9UPV7 400 aa17.2■□□□□ 0.34
COL16A1-208ENST00000468459 WDR19Q8NEZ3 1342 aa17.2■□□□□ 0.34
COL16A1-208ENST00000468459 ADAMTS4O75173 837 aa17.19■□□□□ 0.34
COL16A1-208ENST00000468459 HMGB1P09429 215 aaKnown RBP17.19■□□□□ 0.34
COL16A1-208ENST00000468459 RARBP10826 455 aa17.19■□□□□ 0.34
COL16A1-208ENST00000468459 RXRAP19793 462 aa17.19■□□□□ 0.34
COL16A1-208ENST00000468459 SNAP25P60880 206 aa17.19■□□□□ 0.34
COL16A1-208ENST00000468459 IKQ13123 557 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-208ENST00000468459 NFXL1Q6ZNB6 911 aa17.19■□□□□ 0.34
COL16A1-208ENST00000468459 ZNF467Q7Z7K2 595 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-208ENST00000468459 ZNF654Q8IZM8 581 aa17.19■□□□□ 0.34
COL16A1-208ENST00000468459 MTA3Q9BTC8 594 aa17.19■□□□□ 0.34
COL16A1-208ENST00000468459 BACH2Q9BYV9 841 aa17.19■□□□□ 0.34
COL16A1-208ENST00000468459 XPNPEP3Q9NQH7 507 aa17.19■□□□□ 0.34
COL16A1-208ENST00000468459 LAMA2P24043 3122 aaKnown RBP17.19■□□□□ 0.34
COL16A1-208ENST00000468459 COL11A1P12107 1806 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-208ENST00000468459 FRMPD3Q5JV73 1810 aa17.19■□□□□ 0.34
COL16A1-208ENST00000468459 ZNF536O15090 1300 aa17.19■□□□□ 0.34
COL16A1-208ENST00000468459 SYNGAP1Q96PV0 1343 aa17.19■□□□□ 0.34
COL16A1-208ENST00000468459 PLA2G6O60733 806 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 PGK1P00558 417 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 FDX1P10109 184 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 AKR1A1P14550 325 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 LIFRP42702 1097 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 STAT2P52630 851 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 ANAPC15P60006 121 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 TROAPQ12815 778 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 TRIM60Q495X7 471 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 Q6ZUG5 572 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 RUFY3Q7L099 469 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 STAG2Q8N3U4 1231 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 CHST13Q8NET6 341 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 FERMT2Q96AC1 680 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 LENG1Q96BZ8 264 aaPredicted RBP17.18■□□□□ 0.34
COL16A1-208ENST00000468459 DDX11Q96FC9 970 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 TM6SF1Q9BZW5 370 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 BRPF3Q9ULD4 1205 aa17.18■□□□□ 0.34
COL16A1-208ENST00000468459 CCDC69A6NI79 296 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 CATIPQ7Z7H3 387 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 CCDC144CPQ8IYA2 1237 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 KLHDC9Q8NEP7 349 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 NUP133Q8WUM0 1156 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 BRF1Q92994 677 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 IL17RAQ96F46 866 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 C22orf23Q9BZE7 217 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 UBA5Q9GZZ9 404 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 FBXO40Q9UH90 709 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 MAD2L2Q9UI95 211 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 CNPY2Q9Y2B0 182 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 ATP11BQ9Y2G3 1177 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 CYP46A1Q9Y6A2 500 aa17.17■□□□□ 0.34
COL16A1-208ENST00000468459 ZNFX1Q9P2E3 1918 aaKnown RBP17.16■□□□□ 0.34
COL16A1-208ENST00000468459 MYCNP04198 464 aaPredicted RBP17.16■□□□□ 0.34
COL16A1-208ENST00000468459 PARP1P09874 1014 aaKnown RBP17.16■□□□□ 0.34
COL16A1-208ENST00000468459 FGD1P98174 961 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 APOBRQ0VD83 1088 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 TOB2Q14106 344 aaPredicted RBP17.16■□□□□ 0.34
COL16A1-208ENST00000468459 GRM4Q14833 912 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 SLC35G1Q2M3R5 365 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 ASPRV1Q53RT3 343 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 SYDE2Q5VT97 1194 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 CCSAPQ6IQ19 270 aaPredicted RBP17.16■□□□□ 0.34
COL16A1-208ENST00000468459 APOA5Q6Q788 366 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 RNF180Q86T96 592 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 FAM160B2Q86V87 743 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 SGMS1Q86VZ5 419 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 MICU3Q86XE3 530 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 KIF2CQ99661 725 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 LARP6Q9BRS8 491 aaKnown RBP17.16■□□□□ 0.34
COL16A1-208ENST00000468459 KATNBL1Q9H079 304 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 PDLIM7Q9NR12 457 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 PRR12Q9ULL5 1215 aa17.16■□□□□ 0.34
COL16A1-208ENST00000468459 KLF18A0A0U1RQI7 1052 aa17.15■□□□□ 0.34
COL16A1-208ENST00000468459 TRIM43BA6NCK2 446 aa17.15■□□□□ 0.34
COL16A1-208ENST00000468459 ADCY6O43306 1168 aa17.15■□□□□ 0.34
COL16A1-208ENST00000468459 DDAH1O94760 285 aa17.15■□□□□ 0.34
COL16A1-208ENST00000468459 SLC4A3P48751 1232 aa17.15■□□□□ 0.34
COL16A1-208ENST00000468459 GPATCH4Q5T3I0 446 aaKnown RBP17.15■□□□□ 0.34
COL16A1-208ENST00000468459 BTNL9Q6UXG8 535 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms