RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 USP17L20D6RJB6 530 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 ZNF202O95125 648 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 USP17L24Q0WX57 530 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 LETM2Q2VYF4 491 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 EAPPQ56P03 285 aaPredicted RBP23.45■■□□□ 1.34
TMEM53-207ENST00000468117 USP17L6PQ6QN14 398 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 NEK8Q86SG6 692 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 ZNF579Q8NAF0 562 aaKnown RBP23.45■■□□□ 1.34
TMEM53-207ENST00000468117 ZNF280CQ8ND82 737 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 AS3MTQ9HBK9 375 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 SYKP43405 635 aa23.44■■□□□ 1.34
TMEM53-207ENST00000468117 BACE1P56817 501 aa23.44■■□□□ 1.34
TMEM53-207ENST00000468117 CCDC174Q6PII3 467 aa23.44■■□□□ 1.34
TMEM53-207ENST00000468117 RBM43Q6ZSC3 357 aaKnown RBP23.44■■□□□ 1.34
TMEM53-207ENST00000468117 C4orf32Q8N8J7 132 aa23.44■■□□□ 1.34
TMEM53-207ENST00000468117 ZC3H15Q8WU90 426 aaKnown RBP23.44■■□□□ 1.34
TMEM53-207ENST00000468117 FERMT2Q96AC1 680 aa23.44■■□□□ 1.34
TMEM53-207ENST00000468117 RANBP17Q9H2T7 1088 aaKnown RBP23.44■■□□□ 1.34
TMEM53-207ENST00000468117 TSPY26PQ9H489 355 aa23.44■■□□□ 1.34
TMEM53-207ENST00000468117 TAF1DQ9H5J8 278 aaPredicted RBP23.44■■□□□ 1.34
TMEM53-207ENST00000468117 PAPPA2Q9BXP8 1791 aa23.44■■□□□ 1.34
TMEM53-207ENST00000468117 FAM237AA0A1B0GTK4 181 aa23.43■■□□□ 1.34
TMEM53-207ENST00000468117 POTECB2RU33 542 aa23.43■■□□□ 1.34
TMEM53-207ENST00000468117 VCAM1P19320 739 aa23.43■■□□□ 1.34
TMEM53-207ENST00000468117 PARP14Q460N5 1801 aa23.43■■□□□ 1.34
TMEM53-207ENST00000468117 VWA3AA6NCI4 1184 aa23.43■■□□□ 1.34
TMEM53-207ENST00000468117 CCNT1O60563 726 aaKnown RBP23.43■■□□□ 1.34
TMEM53-207ENST00000468117 USP14P54578 494 aa23.43■■□□□ 1.34
TMEM53-207ENST00000468117 NOL9Q5SY16 702 aaKnown RBP23.43■■□□□ 1.34
TMEM53-207ENST00000468117 USP49Q70CQ1 688 aa23.43■■□□□ 1.34
TMEM53-207ENST00000468117 FUCA2Q9BTY2 467 aa23.43■■□□□ 1.34
TMEM53-207ENST00000468117 TANGO6Q9C0B7 1094 aa23.43■■□□□ 1.34
TMEM53-207ENST00000468117 RBSNQ9H1K0 784 aa23.43■■□□□ 1.34
TMEM53-207ENST00000468117 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.43■■□□□ 1.34
TMEM53-207ENST00000468117 KCNH3Q9ULD8 1083 aa23.43■■□□□ 1.34
TMEM53-207ENST00000468117 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.42■■□□□ 1.34
TMEM53-207ENST00000468117 IQCA1LA6NCM1 817 aa23.42■■□□□ 1.34
TMEM53-207ENST00000468117 L1TD1Q5T7N2 865 aaKnown RBP23.42■■□□□ 1.34
TMEM53-207ENST00000468117 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.42■■□□□ 1.34
TMEM53-207ENST00000468117 GLT8D2Q9H1C3 349 aa23.42■■□□□ 1.34
TMEM53-207ENST00000468117 TMEM60Q9H2L4 133 aa23.42■■□□□ 1.34
TMEM53-207ENST00000468117 WDR90Q96KV7 1748 aa23.42■■□□□ 1.34
TMEM53-207ENST00000468117 MEIS2O14770 477 aa23.42■■□□□ 1.34
TMEM53-207ENST00000468117 PPP1R12BO60237 982 aaPredicted RBP23.42■■□□□ 1.34
TMEM53-207ENST00000468117 MRE11P49959 708 aa23.42■■□□□ 1.34
TMEM53-207ENST00000468117 VGLL4Q14135 290 aa23.42■■□□□ 1.34
TMEM53-207ENST00000468117 IL17AQ16552 155 aa23.42■■□□□ 1.34
TMEM53-207ENST00000468117 SDF4Q9BRK5 362 aa23.42■■□□□ 1.34
TMEM53-207ENST00000468117 OPLAHO14841 1288 aa23.41■■□□□ 1.34
TMEM53-207ENST00000468117 PRPF38AQ8NAV1 312 aaKnown RBP23.41■■□□□ 1.34
TMEM53-207ENST00000468117 CDCA5Q96FF9 252 aa23.41■■□□□ 1.34
TMEM53-207ENST00000468117 SLF1Q9BQI6 1058 aa23.41■■□□□ 1.34
TMEM53-207ENST00000468117 FAM13BQ9NYF5 915 aa23.41■■□□□ 1.34
TMEM53-207ENST00000468117 CTAGE5O15320 804 aa23.4■■□□□ 1.34
TMEM53-207ENST00000468117 XRCC6P12956 609 aaKnown RBP eCLIP23.4■■□□□ 1.34
TMEM53-207ENST00000468117 HMGCS2P54868 508 aa23.4■■□□□ 1.34
TMEM53-207ENST00000468117 MAP3K9P80192 1104 aa23.4■■□□□ 1.34
TMEM53-207ENST00000468117 ARL6IP4Q66PJ3 421 aaKnown RBP23.4■■□□□ 1.34
TMEM53-207ENST00000468117 EPSTI1Q96J88 318 aa23.4■■□□□ 1.34
TMEM53-207ENST00000468117 RPAP3Q9H6T3 665 aaPredicted RBP23.4■■□□□ 1.34
TMEM53-207ENST00000468117 PTPRFP10586 1907 aa23.4■■□□□ 1.34
TMEM53-207ENST00000468117 EDIL3O43854 480 aa23.4■■□□□ 1.34
TMEM53-207ENST00000468117 ERCC4Q92889 916 aaPredicted RBP23.4■■□□□ 1.34
TMEM53-207ENST00000468117 SNCAIPQ9Y6H5 919 aa23.4■■□□□ 1.34
TMEM53-207ENST00000468117 FLOT1O75955 427 aa23.39■■□□□ 1.34
TMEM53-207ENST00000468117 PANK2Q9BZ23 570 aa23.39■■□□□ 1.34
TMEM53-207ENST00000468117 NEMFO60524 1076 aa23.38■■□□□ 1.33
TMEM53-207ENST00000468117 CCDC192P0DO97 292 aa23.38■■□□□ 1.33
TMEM53-207ENST00000468117 RNF214Q8ND24 703 aa23.38■■□□□ 1.33
TMEM53-207ENST00000468117 SYMPKQ92797 1274 aaKnown RBP23.38■■□□□ 1.33
TMEM53-207ENST00000468117 P2RX7Q99572 595 aaKnown RBP23.38■■□□□ 1.33
TMEM53-207ENST00000468117 AFG3L2Q9Y4W6 797 aa23.38■■□□□ 1.33
TMEM53-207ENST00000468117 RLFQ13129 1914 aa23.38■■□□□ 1.33
TMEM53-207ENST00000468117 TRAF1Q13077 416 aa23.38■■□□□ 1.33
TMEM53-207ENST00000468117 LONRF3Q496Y0 759 aa23.38■■□□□ 1.33
TMEM53-207ENST00000468117 PDILTQ8N807 584 aa23.38■■□□□ 1.33
TMEM53-207ENST00000468117 TIGD1Q96MW7 591 aa23.38■■□□□ 1.33
TMEM53-207ENST00000468117 C19orf81C9J6K1 198 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 LAD1O00515 517 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 POLR2DO15514 142 aaKnown RBP23.37■■□□□ 1.33
TMEM53-207ENST00000468117 TDP2O95551 362 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 TYRO3Q06418 890 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 PNMA8AQ86V59 439 aaPredicted RBP23.37■■□□□ 1.33
TMEM53-207ENST00000468117 LDHDQ86WU2 507 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 ANO3Q9BYT9 981 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 CSADQ9Y600 493 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 COL11A1P12107 1806 aaPredicted RBP23.37■■□□□ 1.33
TMEM53-207ENST00000468117 POTEIP0CG38 1075 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 POTEJP0CG39 1038 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 HOXA13P31271 388 aaPredicted RBP23.37■■□□□ 1.33
TMEM53-207ENST00000468117 NF2P35240 595 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 IREB2P48200 963 aaKnown RBP23.37■■□□□ 1.33
TMEM53-207ENST00000468117 DTHD1Q6ZMT9 781 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 MOB2Q70IA6 237 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 POTEDQ86YR6 584 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 CNKSR2Q8WXI2 1034 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 AGBL1Q96MI9 1066 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 PPP1R9AQ9ULJ8 1098 aa23.37■■□□□ 1.33
TMEM53-207ENST00000468117 ZNF536O15090 1300 aa23.36■■□□□ 1.33
TMEM53-207ENST00000468117 AP3B2Q13367 1082 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms