RNA–Protein interactions for RNA: ENST00000467915.1

SGSM3-206, Transcript of small G protein signaling modulator 3, humanhuman

TSL 3

Gene SGSM3, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-206ENST00000467915 PDGFCQ9NRA1 345 aa18.64■□□□□ 0.57
SGSM3-206ENST00000467915 TOMM22Q9NS69 142 aa18.64■□□□□ 0.57
SGSM3-206ENST00000467915 TBX21Q9UL17 535 aa18.64■□□□□ 0.57
SGSM3-206ENST00000467915 TKFCQ3LXA3 575 aa18.63■□□□□ 0.57
SGSM3-206ENST00000467915 B4GALNT3Q6L9W6 998 aa18.63■□□□□ 0.57
SGSM3-206ENST00000467915 EEPD1Q7L9B9 569 aa18.63■□□□□ 0.57
SGSM3-206ENST00000467915 VTI1AQ96AJ9 217 aa18.63■□□□□ 0.57
SGSM3-206ENST00000467915 GLT1D1Q96MS3 346 aa18.63■□□□□ 0.57
SGSM3-206ENST00000467915 TMEM47Q9BQJ4 181 aa18.63■□□□□ 0.57
SGSM3-206ENST00000467915 CYP39A1Q9NYL5 469 aa18.63■□□□□ 0.57
SGSM3-206ENST00000467915 CCPG1Q9ULG6 757 aa18.63■□□□□ 0.57
SGSM3-206ENST00000467915 FRMPD2Q68DX3 1309 aaPredicted RBP18.63■□□□□ 0.57
SGSM3-206ENST00000467915 SMAD3P84022 425 aaKnown RBP18.62■□□□□ 0.57
SGSM3-206ENST00000467915 TNFAIP2Q03169 654 aa18.62■□□□□ 0.57
SGSM3-206ENST00000467915 FPGSQ05932 587 aa18.62■□□□□ 0.57
SGSM3-206ENST00000467915 PPP4R3BQ5MIZ7 849 aa18.62■□□□□ 0.57
SGSM3-206ENST00000467915 TAPT1Q6NXT6 567 aa18.62■□□□□ 0.57
SGSM3-206ENST00000467915 NSMFQ6X4W1 530 aa18.62■□□□□ 0.57
SGSM3-206ENST00000467915 NOL8Q76FK4 1167 aaKnown RBP18.62■□□□□ 0.57
SGSM3-206ENST00000467915 PCSK9Q8NBP7 692 aaKnown RBP18.62■□□□□ 0.57
SGSM3-206ENST00000467915 DCAF4Q8WV16 495 aa18.62■□□□□ 0.57
SGSM3-206ENST00000467915 RILPL2Q969X0 211 aa18.62■□□□□ 0.57
SGSM3-206ENST00000467915 RNPC3Q96LT9 517 aaKnown RBP18.62■□□□□ 0.57
SGSM3-206ENST00000467915 CDX2Q99626 313 aaPredicted RBP18.62■□□□□ 0.57
SGSM3-206ENST00000467915 SPC25Q9HBM1 224 aa18.62■□□□□ 0.57
SGSM3-206ENST00000467915 GPCPD1Q9NPB8 672 aa18.62■□□□□ 0.57
SGSM3-206ENST00000467915 GNEQ9Y223 722 aaKnown RBP18.62■□□□□ 0.57
SGSM3-206ENST00000467915 ELP1O95163 1332 aa18.62■□□□□ 0.57
SGSM3-206ENST00000467915 VCANP13611 3396 aa18.61■□□□□ 0.57
SGSM3-206ENST00000467915 TRIM6-TRIM34B2RNG4 842 aa18.61■□□□□ 0.57
SGSM3-206ENST00000467915 ARVCFO00192 962 aa18.61■□□□□ 0.57
SGSM3-206ENST00000467915 TIMP1P01033 207 aa18.61■□□□□ 0.57
SGSM3-206ENST00000467915 IGHDP01880 384 aa18.61■□□□□ 0.57
SGSM3-206ENST00000467915 ICAM1P05362 532 aa18.61■□□□□ 0.57
SGSM3-206ENST00000467915 SMPD1P17405 629 aa18.61■□□□□ 0.57
SGSM3-206ENST00000467915 NKX3-2P78367 333 aa18.61■□□□□ 0.57
SGSM3-206ENST00000467915 BTNL9Q6UXG8 535 aa18.61■□□□□ 0.57
SGSM3-206ENST00000467915 C16orf59Q7L2K0 433 aa18.61■□□□□ 0.57
SGSM3-206ENST00000467915 TBC1D10CQ8IV04 446 aa18.61■□□□□ 0.57
SGSM3-206ENST00000467915 FBXO16Q8IX29 292 aaPredicted RBP18.61■□□□□ 0.57
SGSM3-206ENST00000467915 RANBP17Q9H2T7 1088 aaKnown RBP18.61■□□□□ 0.57
SGSM3-206ENST00000467915 ASB14A6NK59 587 aa18.6■□□□□ 0.57
SGSM3-206ENST00000467915 NFIBO00712 420 aa18.6■□□□□ 0.57
SGSM3-206ENST00000467915 DYNC1LI2O43237 492 aaPredicted RBP18.6■□□□□ 0.57
SGSM3-206ENST00000467915 TOP1P11387 765 aaKnown RBP18.6■□□□□ 0.57
SGSM3-206ENST00000467915 BAATQ14032 418 aaPredicted RBP18.6■□□□□ 0.57
SGSM3-206ENST00000467915 SYDE2Q5VT97 1194 aa18.6■□□□□ 0.57
SGSM3-206ENST00000467915 CXCL17Q6UXB2 119 aa18.6■□□□□ 0.57
SGSM3-206ENST00000467915 FAM126BQ8IXS8 530 aa18.6■□□□□ 0.57
SGSM3-206ENST00000467915 SMC5Q8IY18 1101 aa18.6■□□□□ 0.57
SGSM3-206ENST00000467915 TCP11L1Q9NUJ3 509 aa18.6■□□□□ 0.57
SGSM3-206ENST00000467915 GRIN2DO15399 1336 aa18.59■□□□□ 0.57
SGSM3-206ENST00000467915 CCDC171Q6TFL3 1326 aa18.59■□□□□ 0.57
SGSM3-206ENST00000467915 A0A0U1RQG5 324 aaPredicted RBP18.59■□□□□ 0.57
SGSM3-206ENST00000467915 TLK2Q86UE8 772 aa18.59■□□□□ 0.57
SGSM3-206ENST00000467915 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.59■□□□□ 0.571e-6■□□□□ 11
SGSM3-206ENST00000467915 PPP1R12CQ9BZL4 782 aa18.59■□□□□ 0.57
SGSM3-206ENST00000467915 PDHBP11177 359 aa18.58■□□□□ 0.56
SGSM3-206ENST00000467915 CSF2RAP15509 400 aa18.58■□□□□ 0.56
SGSM3-206ENST00000467915 SDSP20132 328 aa18.58■□□□□ 0.56
SGSM3-206ENST00000467915 FSCN1Q16658 493 aaKnown RBP18.58■□□□□ 0.56
SGSM3-206ENST00000467915 AKNAD1Q5T1N1 836 aa18.58■□□□□ 0.56
SGSM3-206ENST00000467915 MFSD5Q6N075 450 aa18.58■□□□□ 0.56
SGSM3-206ENST00000467915 PLEKHM2Q8IWE5 1019 aa18.58■□□□□ 0.56
SGSM3-206ENST00000467915 CLEC4DQ8WXI8 215 aa18.58■□□□□ 0.56
SGSM3-206ENST00000467915 MYLIPQ8WY64 445 aa18.58■□□□□ 0.56
SGSM3-206ENST00000467915 ZKSCAN3Q9BRR0 538 aa18.58■□□□□ 0.56
SGSM3-206ENST00000467915 ZMYM6O95789 1325 aa18.57■□□□□ 0.56
SGSM3-206ENST00000467915 NEDD4P46934 1319 aa18.57■□□□□ 0.56
SGSM3-206ENST00000467915 CD4P01730 458 aa18.57■□□□□ 0.56
SGSM3-206ENST00000467915 ACRP10323 421 aa18.57■□□□□ 0.56
SGSM3-206ENST00000467915 CYP2C18P33260 490 aa18.57■□□□□ 0.56
SGSM3-206ENST00000467915 PSMC6P62333 389 aa18.57■□□□□ 0.56
SGSM3-206ENST00000467915 SLC30A10Q6XR72 485 aa18.57■□□□□ 0.56
SGSM3-206ENST00000467915 MFSD6Q6ZSS7 791 aa18.57■□□□□ 0.56
SGSM3-206ENST00000467915 CHD1LQ86WJ1 897 aa18.57■□□□□ 0.56
SGSM3-206ENST00000467915 MORC4Q8TE76 937 aa18.57■□□□□ 0.56
SGSM3-206ENST00000467915 CPVLQ9H3G5 476 aa18.57■□□□□ 0.56
SGSM3-206ENST00000467915 CHD9Q3L8U1 2897 aa18.56■□□□□ 0.56
SGSM3-206ENST00000467915 UMODL1Q5DID0 1318 aa18.56■□□□□ 0.56
SGSM3-206ENST00000467915 MROH7Q68CQ1 1323 aa18.56■□□□□ 0.56
SGSM3-206ENST00000467915 ZNF543Q08ER8 600 aa18.56■□□□□ 0.56
SGSM3-206ENST00000467915 TMEM240Q5SV17 173 aa18.56■□□□□ 0.56
SGSM3-206ENST00000467915 IQSEC1Q6DN90 963 aa18.56■□□□□ 0.56
SGSM3-206ENST00000467915 KIAA1211Q6ZU35 1233 aa18.56■□□□□ 0.56
SGSM3-206ENST00000467915 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.56■□□□□ 0.56
SGSM3-206ENST00000467915 SLC43A3Q8NBI5 491 aa18.56■□□□□ 0.56
SGSM3-206ENST00000467915 EXOC6Q8TAG9 804 aa18.56■□□□□ 0.56
SGSM3-206ENST00000467915 AP5M1Q9H0R1 490 aa18.56■□□□□ 0.56
SGSM3-206ENST00000467915 PTPDC1A2A3K4 754 aa18.55■□□□□ 0.56
SGSM3-206ENST00000467915 GRXCR1A8MXD5 290 aa18.55■□□□□ 0.56
SGSM3-206ENST00000467915 GOLGA8HP0CJ92 632 aa18.55■□□□□ 0.56
SGSM3-206ENST00000467915 SNHG28P0DPA3 235 aa18.55■□□□□ 0.56
SGSM3-206ENST00000467915 ALDH5A1P51649 535 aaPredicted RBP18.55■□□□□ 0.56
SGSM3-206ENST00000467915 NUCB1Q02818 461 aa18.55■□□□□ 0.56
SGSM3-206ENST00000467915 ITGA7Q13683 1181 aa18.55■□□□□ 0.56
SGSM3-206ENST00000467915 TICAM2Q86XR7 235 aa18.55■□□□□ 0.56
SGSM3-206ENST00000467915 TRPV6Q9H1D0 765 aa18.55■□□□□ 0.56
SGSM3-206ENST00000467915 RWDD1Q9H446 243 aaPredicted RBP18.55■□□□□ 0.56
SGSM3-206ENST00000467915 VTA1Q9NP79 307 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms