RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 TCEAL5Q5H9L2 206 aa14.31□□□□□ -0.12
VPS26A-204ENST00000467852 TBC1D9Q6ZT07 1266 aa14.31□□□□□ -0.12
VPS26A-204ENST00000467852 LRP2BPQ9P2M1 347 aa14.31□□□□□ -0.12
VPS26A-204ENST00000467852 SERPINB13Q9UIV8 391 aa14.31□□□□□ -0.12
VPS26A-204ENST00000467852 ZNF292O60281 2723 aa14.31□□□□□ -0.12
VPS26A-204ENST00000467852 CLCN6P51797 869 aa14.3□□□□□ -0.12
VPS26A-204ENST00000467852 PPP4CP60510 307 aa14.3□□□□□ -0.12
VPS26A-204ENST00000467852 WDR5P61964 334 aaKnown RBP14.3□□□□□ -0.12
VPS26A-204ENST00000467852 PSMC6P62333 389 aa14.3□□□□□ -0.12
VPS26A-204ENST00000467852 COL19A1Q14993 1142 aa14.3□□□□□ -0.12
VPS26A-204ENST00000467852 FSCN1Q16658 493 aaKnown RBP14.3□□□□□ -0.12
VPS26A-204ENST00000467852 ST3GAL2Q16842 350 aa14.3□□□□□ -0.12
VPS26A-204ENST00000467852 ZNF467Q7Z7K2 595 aaPredicted RBP14.3□□□□□ -0.12
VPS26A-204ENST00000467852 AP5M1Q9H0R1 490 aa14.3□□□□□ -0.12
VPS26A-204ENST00000467852 MYO7AQ13402 2215 aa14.3□□□□□ -0.12
VPS26A-204ENST00000467852 EP300Q09472 2414 aaPredicted RBP14.3□□□□□ -0.12
VPS26A-204ENST00000467852 IQCF3P0C7M6 154 aa14.29□□□□□ -0.12
VPS26A-204ENST00000467852 TIMM10P62072 90 aa14.29□□□□□ -0.12
VPS26A-204ENST00000467852 TNFAIP2Q03169 654 aa14.29□□□□□ -0.12
VPS26A-204ENST00000467852 SEPT2Q15019 361 aa14.29□□□□□ -0.12
VPS26A-204ENST00000467852 CLUL1Q15846 466 aa14.29□□□□□ -0.12
VPS26A-204ENST00000467852 NAA16Q6N069 864 aaPredicted RBP14.29□□□□□ -0.12
VPS26A-204ENST00000467852 FRMD5Q7Z6J6 570 aa14.29□□□□□ -0.12
VPS26A-204ENST00000467852 TMCO2Q7Z6W1 182 aaPredicted RBP14.29□□□□□ -0.12
VPS26A-204ENST00000467852 SPATA5Q8NB90 893 aa14.29□□□□□ -0.12
VPS26A-204ENST00000467852 NSUN3Q9H649 340 aaKnown RBP14.29□□□□□ -0.12
VPS26A-204ENST00000467852 TRMT13Q9NUP7 481 aaKnown RBP14.29□□□□□ -0.12
VPS26A-204ENST00000467852 PARP14Q460N5 1801 aa14.29□□□□□ -0.12
VPS26A-204ENST00000467852 TRIP12Q14669 1992 aaPredicted RBP14.29□□□□□ -0.12
VPS26A-204ENST00000467852 MAP1BP46821 2468 aaKnown RBP14.29□□□□□ -0.12
VPS26A-204ENST00000467852 A0A1W2PRG0 241 aa14.28□□□□□ -0.12
VPS26A-204ENST00000467852 GJB5O95377 273 aa14.28□□□□□ -0.12
VPS26A-204ENST00000467852 IL15P40933 162 aaPredicted RBP14.28□□□□□ -0.12
VPS26A-204ENST00000467852 SMAD4Q13485 552 aaKnown RBP14.28□□□□□ -0.12
VPS26A-204ENST00000467852 MVPQ14764 893 aaKnown RBP14.28□□□□□ -0.12
VPS26A-204ENST00000467852 RPAINQ86UA6 219 aa14.28□□□□□ -0.12
VPS26A-204ENST00000467852 MAGEB6Q8N7X4 407 aa14.28□□□□□ -0.12
VPS26A-204ENST00000467852 EHD4Q9H223 541 aa14.28□□□□□ -0.12
VPS26A-204ENST00000467852 HMG20BQ9P0W2 317 aa14.28□□□□□ -0.12
VPS26A-204ENST00000467852 GUCY1A2P33402 732 aa14.27□□□□□ -0.13
VPS26A-204ENST00000467852 LTBRP36941 435 aa14.27□□□□□ -0.13
VPS26A-204ENST00000467852 TLK2Q86UE8 772 aa14.27□□□□□ -0.13
VPS26A-204ENST00000467852 FAM212AQ96EL1 285 aa14.27□□□□□ -0.13
VPS26A-204ENST00000467852 ASIC4Q96FT7 647 aa14.27□□□□□ -0.13
VPS26A-204ENST00000467852 XAGE2Q96GT9 111 aa14.27□□□□□ -0.13
VPS26A-204ENST00000467852 C17orf80Q9BSJ5 609 aa14.27□□□□□ -0.13
VPS26A-204ENST00000467852 ADAMTS5Q9UNA0 930 aa14.27□□□□□ -0.13
VPS26A-204ENST00000467852 TANC1Q9C0D5 1861 aa14.27□□□□□ -0.13
VPS26A-204ENST00000467852 MPHOSPH10O00566 681 aaKnown RBP14.26□□□□□ -0.13
VPS26A-204ENST00000467852 DEFB103AP81534 67 aa14.26□□□□□ -0.13
VPS26A-204ENST00000467852 BFSP2Q13515 415 aa14.26□□□□□ -0.13
VPS26A-204ENST00000467852 ARMCX2Q7L311 632 aa14.26□□□□□ -0.13
VPS26A-204ENST00000467852 TTC6Q86TZ1 520 aa14.26□□□□□ -0.13
VPS26A-204ENST00000467852 SPICE1Q8N0Z3 855 aa14.26□□□□□ -0.13
VPS26A-204ENST00000467852 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS26A-204ENST00000467852 ASTN1O14525 1302 aa14.25□□□□□ -0.13
VPS26A-204ENST00000467852 DNAJC25-GNG10A0A024R161 153 aa14.25□□□□□ -0.13
VPS26A-204ENST00000467852 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.25□□□□□ -0.13
VPS26A-204ENST00000467852 DYNC1LI2O43237 492 aaPredicted RBP14.25□□□□□ -0.13
VPS26A-204ENST00000467852 GSE1Q14687 1217 aa14.25□□□□□ -0.13
VPS26A-204ENST00000467852 ACAP1Q15027 740 aa14.25□□□□□ -0.13
VPS26A-204ENST00000467852 KIAA1755Q5JYT7 1200 aa14.25□□□□□ -0.13
VPS26A-204ENST00000467852 PI16Q6UXB8 463 aa14.25□□□□□ -0.13
VPS26A-204ENST00000467852 CCER1Q8TC90 406 aaPredicted RBP14.25□□□□□ -0.13
VPS26A-204ENST00000467852 SAMD11Q96NU1 681 aa14.25□□□□□ -0.13
VPS26A-204ENST00000467852 INSL6Q9Y581 213 aa14.25□□□□□ -0.13
VPS26A-204ENST00000467852 VWA5AO00534 786 aa14.24□□□□□ -0.13
VPS26A-204ENST00000467852 WDR46O15213 610 aaKnown RBP14.24□□□□□ -0.13
VPS26A-204ENST00000467852 MCAMP43121 646 aa14.24□□□□□ -0.13
VPS26A-204ENST00000467852 USP5P45974 858 aa14.24□□□□□ -0.13
VPS26A-204ENST00000467852 GPM6BQ13491 265 aa14.24□□□□□ -0.13
VPS26A-204ENST00000467852 LRRFIP1Q32MZ4 808 aaKnown RBP14.24□□□□□ -0.13
VPS26A-204ENST00000467852 EPC2Q52LR7 807 aa14.24□□□□□ -0.13
VPS26A-204ENST00000467852 GORABQ5T7V8 394 aa14.24□□□□□ -0.13
VPS26A-204ENST00000467852 FAM117BQ6P1L5 589 aa14.24□□□□□ -0.13
VPS26A-204ENST00000467852 SH2D4AQ9H788 454 aa14.24□□□□□ -0.13
VPS26A-204ENST00000467852 CD207Q9UJ71 328 aa14.24□□□□□ -0.13
VPS26A-204ENST00000467852 ZNF214Q9UL59 606 aaPredicted RBP14.24□□□□□ -0.13
VPS26A-204ENST00000467852 GNEQ9Y223 722 aaKnown RBP14.24□□□□□ -0.13
VPS26A-204ENST00000467852 AKAP2Q9Y2D5 859 aa14.24□□□□□ -0.13
VPS26A-204ENST00000467852 LOC730098B7Z3J9 87 aa14.23□□□□□ -0.13
VPS26A-204ENST00000467852 H3BNC9 293 aa14.23□□□□□ -0.13
VPS26A-204ENST00000467852 SHMT1P34896 483 aa14.23□□□□□ -0.13
VPS26A-204ENST00000467852 DLX2Q07687 328 aaPredicted RBP14.23□□□□□ -0.13
VPS26A-204ENST00000467852 CTC1Q2NKJ3 1217 aa14.23□□□□□ -0.13
VPS26A-204ENST00000467852 FAM47CQ5HY64 1035 aa14.23□□□□□ -0.13
VPS26A-204ENST00000467852 CCDC144CPQ8IYA2 1237 aa14.23□□□□□ -0.13
VPS26A-204ENST00000467852 RIPOR3Q96MK2 946 aa14.23□□□□□ -0.13
VPS26A-204ENST00000467852 ARHGEF10LQ9HCE6 1279 aa14.23□□□□□ -0.13
VPS26A-204ENST00000467852 IL16Q14005 1332 aa14.22□□□□□ -0.13
VPS26A-204ENST00000467852 ABHD14A-ACY1A0A1B0GW23 586 aa14.22□□□□□ -0.13
VPS26A-204ENST00000467852 EFCAB14O75071 495 aa14.22□□□□□ -0.13
VPS26A-204ENST00000467852 CBX2Q14781 532 aaPredicted RBP14.22□□□□□ -0.13
VPS26A-204ENST00000467852 CNKSR3Q6P9H4 555 aa14.22□□□□□ -0.13
VPS26A-204ENST00000467852 KIAA2013Q8IYS2 634 aa14.22□□□□□ -0.13
VPS26A-204ENST00000467852 ZNF579Q8NAF0 562 aaKnown RBP14.22□□□□□ -0.13
VPS26A-204ENST00000467852 NEUROD6Q96NK8 337 aa14.22□□□□□ -0.13
VPS26A-204ENST00000467852 KATNBL1Q9H079 304 aa14.22□□□□□ -0.13
VPS26A-204ENST00000467852 USP44Q9H0E7 712 aa14.22□□□□□ -0.13
VPS26A-204ENST00000467852 VCPKMTQ9H867 229 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms