RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 HMGB1P09429 215 aaKnown RBP12.89□□□□□ -0.35
PRPF3-203ENST00000467514 TAL1P17542 331 aaPredicted RBP12.89□□□□□ -0.35
PRPF3-203ENST00000467514 PLCD1P51178 756 aa12.89□□□□□ -0.35
PRPF3-203ENST00000467514 ICA1Q05084 483 aa12.89□□□□□ -0.35
PRPF3-203ENST00000467514 KCNA10Q16322 511 aa12.89□□□□□ -0.35
PRPF3-203ENST00000467514 PPP2R2DQ66LE6 453 aa12.89□□□□□ -0.35
PRPF3-203ENST00000467514 TMEM179Q6ZVK1 233 aa12.89□□□□□ -0.35
PRPF3-203ENST00000467514 ZNF365Q70YC5 407 aa12.89□□□□□ -0.35
PRPF3-203ENST00000467514 FBXL16Q8N461 479 aa12.89□□□□□ -0.35
PRPF3-203ENST00000467514 CRNKL1Q9BZJ0 848 aaKnown RBP12.89□□□□□ -0.35
PRPF3-203ENST00000467514 MCM9Q9NXL9 1143 aa12.89□□□□□ -0.35
PRPF3-203ENST00000467514 ANAPC4Q9UJX5 808 aa12.89□□□□□ -0.35
PRPF3-203ENST00000467514 FAM184BQ9ULE4 1060 aa12.89□□□□□ -0.35
PRPF3-203ENST00000467514 CTDP1Q9Y5B0 961 aaPredicted RBP12.89□□□□□ -0.35
PRPF3-203ENST00000467514 LAMA4Q16363 1823 aa12.89□□□□□ -0.35
PRPF3-203ENST00000467514 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
PRPF3-203ENST00000467514 WDR46O15213 610 aaKnown RBP12.88□□□□□ -0.35
PRPF3-203ENST00000467514 HOXD11P31277 338 aaPredicted RBP12.88□□□□□ -0.35
PRPF3-203ENST00000467514 GUCY1A2P33402 732 aa12.88□□□□□ -0.35
PRPF3-203ENST00000467514 COPB2P35606 906 aa12.88□□□□□ -0.35
PRPF3-203ENST00000467514 TOB2Q14106 344 aaPredicted RBP12.88□□□□□ -0.35
PRPF3-203ENST00000467514 ADGRE1Q14246 886 aa12.88□□□□□ -0.35
PRPF3-203ENST00000467514 TMEM132BQ14DG7 1078 aa12.88□□□□□ -0.35
PRPF3-203ENST00000467514 DHX32Q7L7V1 743 aaKnown RBP12.88□□□□□ -0.35
PRPF3-203ENST00000467514 TBC1D10CQ8IV04 446 aa12.88□□□□□ -0.35
PRPF3-203ENST00000467514 MB21D2Q8IYB1 491 aaPredicted RBP12.88□□□□□ -0.35
PRPF3-203ENST00000467514 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
PRPF3-203ENST00000467514 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
PRPF3-203ENST00000467514 CXXC1Q9P0U4 656 aaPredicted RBP12.88□□□□□ -0.35
PRPF3-203ENST00000467514 TBX21Q9UL17 535 aa12.88□□□□□ -0.35
PRPF3-203ENST00000467514 LIMCH1Q9UPQ0 1083 aa12.88□□□□□ -0.35
PRPF3-203ENST00000467514 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
PRPF3-203ENST00000467514 WDR19Q8NEZ3 1342 aa12.88□□□□□ -0.35
PRPF3-203ENST00000467514 A0A0U1RQG5 324 aaPredicted RBP12.87□□□□□ -0.35
PRPF3-203ENST00000467514 ZBBXA8MT70 800 aa12.87□□□□□ -0.35
PRPF3-203ENST00000467514 ZNF213O14771 459 aa12.87□□□□□ -0.35
PRPF3-203ENST00000467514 GTPBP6O43824 516 aaPredicted RBP12.87□□□□□ -0.35
PRPF3-203ENST00000467514 ADAMTS4O75173 837 aa12.87□□□□□ -0.35
PRPF3-203ENST00000467514 APPP05067 770 aa12.87□□□□□ -0.35
PRPF3-203ENST00000467514 HAND2P61296 217 aa12.87□□□□□ -0.35
PRPF3-203ENST00000467514 TFF2Q03403 129 aa12.87□□□□□ -0.35
PRPF3-203ENST00000467514 NOL8Q76FK4 1167 aaKnown RBP12.87□□□□□ -0.35
PRPF3-203ENST00000467514 AMOTL1Q8IY63 956 aa12.87□□□□□ -0.35
PRPF3-203ENST00000467514 INTS4Q96HW7 963 aaKnown RBP12.87□□□□□ -0.35
PRPF3-203ENST00000467514 NACAP1Q9BZK3 213 aa12.87□□□□□ -0.35
PRPF3-203ENST00000467514 NAPBQ9H115 298 aa12.87□□□□□ -0.35
PRPF3-203ENST00000467514 DIS3Q9Y2L1 958 aaKnown RBP12.87□□□□□ -0.35
PRPF3-203ENST00000467514 PARP14Q460N5 1801 aa12.87□□□□□ -0.35
PRPF3-203ENST00000467514 ELP1O95163 1332 aa12.87□□□□□ -0.35
PRPF3-203ENST00000467514 CHD9Q3L8U1 2897 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 LARGE1O95461 756 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 FGBP02675 491 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 ASGR1P07306 291 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 FGRP09769 529 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 ZNF865P0CJ78 1059 aaPredicted RBP12.86□□□□□ -0.35
PRPF3-203ENST00000467514 CYP2C18P33260 490 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 STAT3P40763 770 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 ANTXR2P58335 489 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 ANKRD1Q15327 319 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 TMEM31Q5JXX7 168 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 OTOP2Q7RTS6 562 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 RIOX2Q8IUF8 465 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 CLEC10AQ8IUN9 316 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 SDR42E1Q8WUS8 393 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 ZSCAN31Q96LW9 406 aaPredicted RBP12.86□□□□□ -0.35
PRPF3-203ENST00000467514 VCPKMTQ9H867 229 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 GOPCQ9HD26 462 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 IL23AQ9NPF7 189 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 DCP1AQ9NPI6 582 aaPredicted RBP12.86□□□□□ -0.35
PRPF3-203ENST00000467514 ATP8A2Q9NTI2 1148 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 TPCN1Q9ULQ1 816 aa12.86□□□□□ -0.35
PRPF3-203ENST00000467514 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
PRPF3-203ENST00000467514 ARVCFO00192 962 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 DUSP11O75319 330 aaKnown RBP12.85□□□□□ -0.35
PRPF3-203ENST00000467514 TDO2P48775 406 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 KCNQ1P51787 676 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 EVCP57679 992 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 ST3GAL1Q11201 340 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 ZNF792Q3KQV3 632 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 SBK1Q52WX2 424 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 GNASQ5JWF2 1037 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 KIAA1755Q5JYT7 1200 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 CTR9Q6PD62 1173 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 STAG1Q8WVM7 1258 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 TCEANC2Q96MN5 208 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 SLKQ9H2G2 1235 aaPredicted RBP12.85□□□□□ -0.35
PRPF3-203ENST00000467514 HIPK3Q9H422 1215 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 SH2B1Q9NRF2 756 aaPredicted RBP12.85□□□□□ -0.35
PRPF3-203ENST00000467514 SWAP70Q9UH65 585 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 SLC4A7Q9Y6M7 1214 aa12.85□□□□□ -0.35
PRPF3-203ENST00000467514 MYADML2A6NDP7 307 aa12.84□□□□□ -0.35
PRPF3-203ENST00000467514 RABGGTBP53611 331 aa12.84□□□□□ -0.35
PRPF3-203ENST00000467514 PPARAQ07869 468 aa12.84□□□□□ -0.35
PRPF3-203ENST00000467514 SNRNP48Q6IEG0 339 aaKnown RBP12.84□□□□□ -0.35
PRPF3-203ENST00000467514 Q6ZUG5 572 aa12.84□□□□□ -0.35
PRPF3-203ENST00000467514 C16orf59Q7L2K0 433 aa12.84□□□□□ -0.35
PRPF3-203ENST00000467514 NCOA7Q8NI08 942 aa12.84□□□□□ -0.35
PRPF3-203ENST00000467514 HERVK_113Q902F9 699 aa12.84□□□□□ -0.35
PRPF3-203ENST00000467514 LRFN3Q9BTN0 628 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms