RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	ANP32B	Q92688	251 aa	Known RBP	13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	KIFC2	Q96AC6	838 aa		13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	KIAA1683	Q9H0B3	1180 aa		13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	TMEM60	Q9H2L4	133 aa		13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	RANBP17	Q9H2T7	1088 aa	Known RBP	13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	AS3MT	Q9HBK9	375 aa		13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	FEM1B	Q9UK73	627 aa		13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	COL11A1	P12107	1806 aa	Predicted RBP	13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	SMCHD1	A6NHR9	2005 aa		13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	POLR2D	O15514	142 aa	Known RBP	13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	OR52Z1	P0C646	297 aa		13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	TAL1	P17542	331 aa	Predicted RBP	13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	LONP1	P36776	959 aa	Known RBP	13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	PRPH	P41219	470 aa		13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	TRAF1	Q13077	416 aa		13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	MTMR2	Q13614	643 aa		13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	GPR162	Q16538	588 aa		13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	IL17A	Q16552	155 aa		13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	SUPT20HL1	Q3ZLR7	823 aa		13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	USP49	Q70CQ1	688 aa		13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	FAM200A	Q8TCP9	573 aa		13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	ERCC4	Q92889	916 aa	Predicted RBP	13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	PICK1	Q9NRD5	415 aa		13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	FZD1	Q9UP38	647 aa		13.97	□□□□□ -0.17
HDLBP-231	ENST00000467435	TXLNA	P40222	546 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	USP14	P54578	494 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	AP3B2	Q13367	1082 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	UVSSA	Q2YD98	709 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	LONRF3	Q496Y0	759 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	DPY19L2	Q6NUT2	758 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	CCDC174	Q6PII3	467 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	DTHD1	Q6ZMT9	781 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	PDILT	Q8N807	584 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	DCPS	Q96C86	337 aa	Known RBP	13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	KLRG1	Q96E93	195 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	EPSTI1	Q96J88	318 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	WDR18	Q9BV38	432 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	ANO3	Q9BYT9	981 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	DNAJC25	Q9H1X3	360 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	KIAA1468	Q9P260	1216 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	SERTAD1	Q9UHV2	236 aa		13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	HOOK1	Q9UJC3	728 aa	Known RBP	13.96	□□□□□ -0.17
HDLBP-231	ENST00000467435	LOC285556	D6RIA3	1793 aa		13.96	□□□□□ -0.18
HDLBP-231	ENST00000467435	RLF	Q13129	1914 aa		13.96	□□□□□ -0.18
HDLBP-231	ENST00000467435		A0A087X0B3	334 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP17L15	C9J2P7	530 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP17L13	C9JLJ4	530 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	ADM5	C9JUS6	153 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP17L11	C9JVI0	530 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP17L18	D6R9N7	530 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP17L22	D6RA61	530 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP17L17	D6RBQ6	530 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP17L19	D6RCP7	530 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP17L20	D6RJB6	530 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	ACTN4	O43707	911 aa	Known RBP	13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	TDP2	O95551	362 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	PTPRA	P18433	802 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	CCDC173	Q0VFZ6	552 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP17L24	Q0WX57	530 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	PNOC	Q13519	176 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	DGKZ	Q13574	1117 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	ZRSR1	Q15695	479 aa	Known RBP	13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	NOL9	Q5SY16	702 aa	Known RBP	13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	MCTP2	Q6DN12	878 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP17L6P	Q6QN14	398 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	POTED	Q86YR6	584 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	SULF1	Q8IWU6	871 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	DHX58	Q96C10	678 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	NAP1L4	Q99733	375 aa	Known RBP	13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	SLF1	Q9BQI6	1058 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	PYM1	Q9BRP8	204 aa	Known RBP	13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	TANGO6	Q9C0B7	1094 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	FBXO28	Q9NVF7	368 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	ANO10	Q9NW15	660 aa		13.95	□□□□□ -0.18
HDLBP-231	ENST00000467435	ABCB11	O95342	1321 aa		13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435	MEIS2	O14770	477 aa		13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435	SLC37A4	O43826	429 aa		13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435	CAVIN2	O95810	425 aa		13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435	VCAM1	P19320	739 aa		13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435	SPP2	Q13103	211 aa		13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435	KANK3	Q6NY19	840 aa		13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP50	Q70EL3	339 aa	Predicted RBP	13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435	ZNF280C	Q8ND82	737 aa		13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435	CCDC34	Q96HJ3	373 aa		13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435	CBX8	Q9HC52	389 aa		13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435	USP25	Q9UHP3	1055 aa		13.94	□□□□□ -0.18
HDLBP-231	ENST00000467435		A0A087WWV3	80 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	SPDYE3	A6NKU9	549 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	OPLAH	O14841	1288 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	FOXN1	O15353	648 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	GCFC2	P16383	781 aa	Known RBP	13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	EPHX2	P34913	555 aa		13.93	□□□□□ -0.18
HDLBP-231	ENST00000467435	ZNF165	P49910	485 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms