RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 BAG1Q99933 345 aaPredicted RBP12.88□□□□□ -0.35
HPS1-208ENST00000467246 EHD4Q9H223 541 aa12.88□□□□□ -0.35
HPS1-208ENST00000467246 SCN9AQ15858 1988 aa12.88□□□□□ -0.35
HPS1-208ENST00000467246 MYH8P13535 1937 aa12.88□□□□□ -0.35
HPS1-208ENST00000467246 hCG_1984214I3L0E3 225 aa12.88□□□□□ -0.35
HPS1-208ENST00000467246 KLRC4O43908 158 aa12.88□□□□□ -0.35
HPS1-208ENST00000467246 RAD21O60216 631 aa12.88□□□□□ -0.35
HPS1-208ENST00000467246 RXRBP28702 533 aa12.88□□□□□ -0.35
HPS1-208ENST00000467246 TXKP42681 527 aa12.88□□□□□ -0.35
HPS1-208ENST00000467246 UBE2SQ16763 222 aa12.88□□□□□ -0.35
HPS1-208ENST00000467246 KMT5BQ4FZB7 885 aa12.88□□□□□ -0.35
HPS1-208ENST00000467246 ZSCAN29Q8IWY8 852 aaPredicted RBP12.88□□□□□ -0.35
HPS1-208ENST00000467246 ZNF713Q8N859 430 aaPredicted RBP12.88□□□□□ -0.35
HPS1-208ENST00000467246 SLC37A4O43826 429 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 TDP2O95551 362 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 CCT6AP40227 531 aaKnown RBP12.87□□□□□ -0.35
HPS1-208ENST00000467246 NAA30Q147X3 362 aaPredicted RBP12.87□□□□□ -0.35
HPS1-208ENST00000467246 SYT10Q6XYQ8 523 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 KIF18AQ8NI77 898 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 MMTAG2Q9BU76 263 aaKnown RBP12.87□□□□□ -0.35
HPS1-208ENST00000467246 TRIM49BA6NDI0 452 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 PBX1P40424 430 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 KRT31Q15323 416 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 CREBRFQ8IUR6 639 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 CPLX3Q8WVH0 158 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 C7orf43Q8WVR3 580 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 CCDC17Q96LX7 622 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 MTMR9Q96QG7 549 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 MRIQ9BWK5 157 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 PI4KBQ9UBF8 816 aa12.87□□□□□ -0.35
HPS1-208ENST00000467246 ARHGAP6O43182 974 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 EEF2P13639 858 aaKnown RBP12.86□□□□□ -0.35
HPS1-208ENST00000467246 TNNI2P48788 182 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 PMS1P54277 932 aaKnown RBP12.86□□□□□ -0.35
HPS1-208ENST00000467246 CERKLQ49MI3 558 aaPredicted RBP12.86□□□□□ -0.35
HPS1-208ENST00000467246 GPATCH4Q5T3I0 446 aaKnown RBP12.86□□□□□ -0.35
HPS1-208ENST00000467246 REXO1L1PQ8IX06 675 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 ADSSL1Q8N142 457 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 IGSF22Q8N9C0 903 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 CTAGE1Q96RT6 745 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 IDI2Q9BXS1 227 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 DHX36Q9H2U1 1008 aaKnown RBP12.86□□□□□ -0.35
HPS1-208ENST00000467246 VGLL3A8MV65 326 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 FKBP1AP62942 108 aaKnown RBP12.86□□□□□ -0.35
HPS1-208ENST00000467246 RBL2Q08999 1139 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 VPS16Q9H269 839 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 TDRD3Q9H7E2 651 aaKnown RBP12.86□□□□□ -0.35
HPS1-208ENST00000467246 RIC8AQ9NPQ8 531 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 KIF2AO00139 706 aaPredicted RBP12.86□□□□□ -0.35
HPS1-208ENST00000467246 ZBTB5O15062 677 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 STX10O60499 249 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 HDLBPQ00341 1268 aaKnown RBP12.86□□□□□ -0.35
HPS1-208ENST00000467246 KCNB1Q14721 858 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 EZH2Q15910 746 aaKnown RBP12.86□□□□□ -0.35
HPS1-208ENST00000467246 SLC15A2Q16348 729 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 CALCRLQ16602 461 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 FILIP1LQ4L180 1135 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 TOGARAM2Q6ZUX3 1019 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 SIAH1Q8IUQ4 282 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 BBXQ8WY36 941 aaPredicted RBP12.86□□□□□ -0.35
HPS1-208ENST00000467246 CNKSR1Q969H4 720 aa12.86□□□□□ -0.35
HPS1-208ENST00000467246 LIMA1Q9UHB6 759 aaKnown RBP12.86□□□□□ -0.35
HPS1-208ENST00000467246 LRRC10BA6NIK2 292 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 AKR1B15C9JRZ8 316 aaPredicted RBP12.85□□□□□ -0.35
HPS1-208ENST00000467246 N4BP3O15049 544 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 RHOBTB3O94955 611 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 SEPT2Q15019 361 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 TCP11X2Q5H9J9 407 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 MTERF4Q7Z6M4 381 aaKnown RBP12.85□□□□□ -0.35
HPS1-208ENST00000467246 IRF2BP1Q8IU81 584 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 TRIM9Q9C026 710 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 TAB2Q9NYJ8 693 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 PPP2R2CQ9Y2T4 447 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 KCNJ18B7U540 433 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 GDF11O95390 407 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 MYL1P05976 194 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 CLK2P49760 499 aaKnown RBP12.85□□□□□ -0.35
HPS1-208ENST00000467246 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
HPS1-208ENST00000467246 NCBP1Q09161 790 aaKnown RBP12.85□□□□□ -0.35
HPS1-208ENST00000467246 KCNJ12Q14500 433 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 GIMAP8Q8ND71 665 aaPredicted RBP12.85□□□□□ -0.35
HPS1-208ENST00000467246 MTMR8Q96EF0 704 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 CUEDC2Q9H467 287 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 LRWD1Q9UFC0 647 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 SERPINA10Q9UK55 444 aa12.85□□□□□ -0.35
HPS1-208ENST00000467246 C10orf71Q711Q0 1435 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 POTEMA6NI47 508 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 YDJCA8MPS7 323 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 SLC1A4P43007 532 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 COPB1P53618 953 aaKnown RBP12.84□□□□□ -0.35
HPS1-208ENST00000467246 ORC2Q13416 577 aaPredicted RBP12.84□□□□□ -0.35
HPS1-208ENST00000467246 MTF1Q14872 753 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 TATDN1Q6P1N9 297 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 TRIM65Q6PJ69 517 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 PPFIBP1Q86W92 1011 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 GJA10Q969M2 543 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 MKL1Q969V6 931 aa12.84□□□□□ -0.35
HPS1-208ENST00000467246 PRMT6Q96LA8 375 aaPredicted RBP12.84□□□□□ -0.35
HPS1-208ENST00000467246 PDGFDQ9GZP0 370 aaPredicted RBP12.84□□□□□ -0.35
HPS1-208ENST00000467246 PSTPIP2Q9H939 334 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms