RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 USP17L20D6RJB6 530 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 MEIS2O14770 477 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 ICAM1P05362 532 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 TRAPPC10P48553 1259 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 USP17L24Q0WX57 530 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 UBE2SQ16763 222 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 USH1GQ495M9 461 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 POTEEQ6S8J3 1075 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 KRT25Q7Z3Z0 450 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 REXO1Q8N1G1 1221 aaKnown RBP14.88□□□□□ -0.03
COL4A1-202ENST00000467182 PROCA1Q8NCQ7 364 aaPredicted RBP14.88□□□□□ -0.03
COL4A1-202ENST00000467182 BICD2Q8TD16 824 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 CUL5Q93034 780 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 ATG4CQ96DT6 458 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 PSTPIP2Q9H939 334 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 MORC2Q9Y6X9 1032 aaPredicted RBP14.88□□□□□ -0.03
COL4A1-202ENST00000467182 PASKQ96RG2 1323 aa14.88□□□□□ -0.03
COL4A1-202ENST00000467182 VWA5AO00534 786 aa14.87□□□□□ -0.03
COL4A1-202ENST00000467182 KIF3CO14782 793 aa14.87□□□□□ -0.03
COL4A1-202ENST00000467182 SPTLC2O15270 562 aa14.87□□□□□ -0.03
COL4A1-202ENST00000467182 HOXA7P31268 230 aaPredicted RBP14.87□□□□□ -0.03
COL4A1-202ENST00000467182 UBE2HP62256 183 aa14.87□□□□□ -0.03
COL4A1-202ENST00000467182 COG2Q14746 738 aa14.87□□□□□ -0.03
COL4A1-202ENST00000467182 KLHL40Q2TBA0 621 aa14.87□□□□□ -0.03
COL4A1-202ENST00000467182 TTC38Q5R3I4 469 aa14.87□□□□□ -0.03
COL4A1-202ENST00000467182 JAKMIP3Q5VZ66 844 aa14.87□□□□□ -0.03
COL4A1-202ENST00000467182 AGBL1Q96MI9 1066 aa14.87□□□□□ -0.03
COL4A1-202ENST00000467182 GLT8D2Q9H1C3 349 aa14.87□□□□□ -0.03
COL4A1-202ENST00000467182 NOL7Q9UMY1 257 aaKnown RBP14.87□□□□□ -0.03
COL4A1-202ENST00000467182 ABCB11O95342 1321 aa14.87□□□□□ -0.03
COL4A1-202ENST00000467182 MYPNQ86TC9 1320 aa14.87□□□□□ -0.03
COL4A1-202ENST00000467182 MYH7BA7E2Y1 1941 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 CCDC194A0A1B0GVG4 234 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 SPDYE16A6NNV3 312 aaPredicted RBP14.86□□□□□ -0.03
COL4A1-202ENST00000467182 PIK3CDO00329 1044 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 PPP6R2O75170 966 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 FDX1P10109 184 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 MRPL12P52815 198 aaKnown RBP14.86□□□□□ -0.03
COL4A1-202ENST00000467182 GHRHRQ02643 423 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 TRAF1Q13077 416 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 STK38Q15208 465 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 NONOQ15233 471 aaKnown RBP eCLIP14.86□□□□□ -0.03
COL4A1-202ENST00000467182 INF2Q27J81 1249 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 SKOR2Q2VWA4 1001 aaPredicted RBP14.86□□□□□ -0.03
COL4A1-202ENST00000467182 AXDND1Q5T1B0 1012 aaPredicted RBP14.86□□□□□ -0.03
COL4A1-202ENST00000467182 GPAT2Q6NUI2 795 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 USP17L6PQ6QN14 398 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 SAMD1Q6SPF0 538 aaPredicted RBP14.86□□□□□ -0.03
COL4A1-202ENST00000467182 C4orf32Q8N8J7 132 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 C2orf69Q8N8R5 385 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 KCNG4Q8TDN1 519 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 SLC10A4Q96EP9 437 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 RAVER2Q9HCJ3 691 aaKnown RBP14.86□□□□□ -0.03
COL4A1-202ENST00000467182 PCDHA7Q9UN72 937 aa14.86□□□□□ -0.03
COL4A1-202ENST00000467182 ZBED4O75132 1171 aa14.85□□□□□ -0.03
COL4A1-202ENST00000467182 MBD3O95983 291 aa14.85□□□□□ -0.03
COL4A1-202ENST00000467182 ATP2B1P20020 1258 aa14.85□□□□□ -0.03
COL4A1-202ENST00000467182 ZNF174Q15697 407 aa14.85□□□□□ -0.03
COL4A1-202ENST00000467182 GADL1Q6ZQY3 521 aa14.85□□□□□ -0.03
COL4A1-202ENST00000467182 TEX2Q8IWB9 1127 aa14.85□□□□□ -0.03
COL4A1-202ENST00000467182 TBCKQ8TEA7 893 aa14.85□□□□□ -0.03
COL4A1-202ENST00000467182 CLEC4DQ8WXI8 215 aa14.85□□□□□ -0.03
COL4A1-202ENST00000467182 TBC1D5Q92609 795 aa14.85□□□□□ -0.03
COL4A1-202ENST00000467182 ZNF214Q9UL59 606 aaPredicted RBP14.85□□□□□ -0.03
COL4A1-202ENST00000467182 CCPG1Q9ULG6 757 aa14.85□□□□□ -0.03
COL4A1-202ENST00000467182 AGTPBP1Q9UPW5 1226 aa14.85□□□□□ -0.03
COL4A1-202ENST00000467182 MRVI1Q9Y6F6 885 aa14.85□□□□□ -0.03
COL4A1-202ENST00000467182 DDX49Q9Y6V7 483 aaKnown RBP14.85□□□□□ -0.03
COL4A1-202ENST00000467182 ATP2A1O14983 1001 aa14.84□□□□□ -0.03
COL4A1-202ENST00000467182 MARCKSP29966 332 aaPredicted RBP14.84□□□□□ -0.03
COL4A1-202ENST00000467182 OAZ1P54368 228 aa14.84□□□□□ -0.03
COL4A1-202ENST00000467182 ATP2C1P98194 919 aaPredicted RBP14.84□□□□□ -0.03
COL4A1-202ENST00000467182 TMEM132BQ14DG7 1078 aa14.84□□□□□ -0.03
COL4A1-202ENST00000467182 CRYGNQ8WXF5 182 aa14.84□□□□□ -0.03
COL4A1-202ENST00000467182 MS4A4AQ96JQ5 239 aa14.84□□□□□ -0.03
COL4A1-202ENST00000467182 FBXO2Q9UK22 296 aaPredicted RBP14.84□□□□□ -0.03
COL4A1-202ENST00000467182 MRPL11Q9Y3B7 192 aaKnown RBP14.84□□□□□ -0.03
COL4A1-202ENST00000467182 A0A1W2PQ27 194 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 A0A1W2PQ64 194 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 A0A1W2PQD8 194 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 LIG1P18858 919 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 PTPREP23469 700 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 AP3B2Q13367 1082 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 SNAPC2Q13487 334 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 MUM1L1Q5H9M0 696 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 ADALQ6DHV7 355 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 LBX2Q6XYB7 198 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 NEK8Q86SG6 692 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 CPXCR1Q8N123 301 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 ANO3Q9BYT9 981 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 GOLPH3LQ9H4A5 285 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 GPBP1L1Q9HC44 474 aaPredicted RBP14.83□□□□□ -0.04
COL4A1-202ENST00000467182 HOXC10Q9NYD6 342 aa14.83□□□□□ -0.04
COL4A1-202ENST00000467182 NFIBO00712 420 aa14.82□□□□□ -0.04
COL4A1-202ENST00000467182 CNMDO75829 334 aa14.82□□□□□ -0.04
COL4A1-202ENST00000467182 BMP15O95972 392 aa14.82□□□□□ -0.04
COL4A1-202ENST00000467182 HOXA13P31271 388 aaPredicted RBP14.82□□□□□ -0.04
COL4A1-202ENST00000467182 ME1P48163 572 aa14.82□□□□□ -0.04
COL4A1-202ENST00000467182 HSD17B4P51659 736 aa14.82□□□□□ -0.04
COL4A1-202ENST00000467182 GRIN1Q05586 938 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms