RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 DNAJC25-GNG10A0A024R161 153 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 FITM1A5D6W6 292 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 TNFRSF10CO14798 259 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 LRRN2O75325 713 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 UBOX5O94941 541 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 ENDOUP21128 410 aaKnown RBP6.97□□□□□ -1.29
LRCH3-212ENST00000466845 MAP2K1Q02750 393 aaPredicted RBP6.97□□□□□ -1.29
LRCH3-212ENST00000466845 NMIQ13287 307 aaPredicted RBP6.97□□□□□ -1.29
LRCH3-212ENST00000466845 FZD5Q13467 585 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 COL9A2Q14055 689 aaPredicted RBP6.97□□□□□ -1.29
LRCH3-212ENST00000466845 ZKSCAN8Q15776 578 aaPredicted RBP6.97□□□□□ -1.29
LRCH3-212ENST00000466845 LDLRAD1Q5T700 205 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 NBPF12Q5TAG4 269 aaPredicted RBP6.97□□□□□ -1.29
LRCH3-212ENST00000466845 FYB2Q5VWT5 728 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 GK5Q6ZS86 529 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 USP48Q86UV5 1035 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 NT5DC4Q86YG4 428 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 RPUSD2Q8IZ73 545 aaKnown RBP6.97□□□□□ -1.29
LRCH3-212ENST00000466845 TTC30BQ8N4P2 665 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 ZNF512BQ96KM6 892 aaPredicted RBP6.97□□□□□ -1.29
LRCH3-212ENST00000466845 RSPH9Q9H1X1 276 aaPredicted RBP6.97□□□□□ -1.29
LRCH3-212ENST00000466845 ADAMTS10Q9H324 1103 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 PIF1Q9H611 641 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 SPC25Q9HBM1 224 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 PRR13Q9NZ81 148 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 ABCF2Q9UG63 623 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 SCINQ9Y6U3 715 aa6.97□□□□□ -1.29
LRCH3-212ENST00000466845 BICDL2A1A5D9 508 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 SCAMP3O14828 347 aaKnown RBP6.96□□□□□ -1.3
LRCH3-212ENST00000466845 CBFA2T2O43439 604 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 CLEC3AO75596 197 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 HSP90AA1P07900 732 aaKnown RBP6.96□□□□□ -1.3
LRCH3-212ENST00000466845 NME1P15531 152 aaKnown RBP6.96□□□□□ -1.3
LRCH3-212ENST00000466845 SSR1P43307 286 aaKnown RBP6.96□□□□□ -1.3
LRCH3-212ENST00000466845 CRKP46108 304 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 FANCCQ00597 558 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 CLCQ05315 142 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 MESP2Q0VG99 397 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 MLANAQ16655 118 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 TBC1D10BQ4KMP7 808 aaPredicted RBP6.96□□□□□ -1.3
LRCH3-212ENST00000466845 RALGPS1Q5JS13 557 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 OVOS1Q6IE37 1185 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 TAB3Q8N5C8 712 aaPredicted RBP6.96□□□□□ -1.3
LRCH3-212ENST00000466845 PDILTQ8N807 584 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 ANKS4BQ8N8V4 417 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 IL17RAQ96F46 866 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 MYCBPQ99417 103 aaPredicted RBP6.96□□□□□ -1.3
LRCH3-212ENST00000466845 RAI14Q9P0K7 980 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 COL4A3BPQ9Y5P4 624 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 POLA1P09884 1462 aaPredicted RBP6.96□□□□□ -1.3
LRCH3-212ENST00000466845 SYNRGQ9UMZ2 1314 aa6.96□□□□□ -1.3
LRCH3-212ENST00000466845 TARBP1Q13395 1621 aaKnown RBP6.95□□□□□ -1.3
LRCH3-212ENST00000466845 DBX1A6NMT0 343 aa6.95□□□□□ -1.3
LRCH3-212ENST00000466845 CT47B1P0C2W7 299 aaPredicted RBP6.95□□□□□ -1.3
LRCH3-212ENST00000466845 ZGLP1P0C6A0 271 aa6.95□□□□□ -1.3
LRCH3-212ENST00000466845 HK2P52789 917 aa6.95□□□□□ -1.3
LRCH3-212ENST00000466845 RPAINQ86UA6 219 aa6.95□□□□□ -1.3
LRCH3-212ENST00000466845 FBXO15Q8NCQ5 510 aaPredicted RBP6.95□□□□□ -1.3
LRCH3-212ENST00000466845 STAG1Q8WVM7 1258 aa6.95□□□□□ -1.3
LRCH3-212ENST00000466845 EAF1Q96JC9 268 aaPredicted RBP6.95□□□□□ -1.3
LRCH3-212ENST00000466845 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.95□□□□□ -1.3
LRCH3-212ENST00000466845 SFMBT1Q9UHJ3 866 aa6.95□□□□□ -1.3
LRCH3-212ENST00000466845 ZNF281Q9Y2X9 895 aa6.95□□□□□ -1.3
LRCH3-212ENST00000466845 PCDHA11Q9Y5I1 949 aa6.95□□□□□ -1.3
LRCH3-212ENST00000466845 FGD5Q6ZNL6 1462 aa6.94□□□□□ -1.3
LRCH3-212ENST00000466845 SSU72P8A0A1W2PR75 194 aa6.94□□□□□ -1.3
LRCH3-212ENST00000466845 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.94□□□□□ -1.3
LRCH3-212ENST00000466845 CD53P19397 219 aa6.94□□□□□ -1.3
LRCH3-212ENST00000466845 ERCC5P28715 1186 aaPredicted RBP6.94□□□□□ -1.3
LRCH3-212ENST00000466845 MAN1A1P33908 653 aa6.94□□□□□ -1.3
LRCH3-212ENST00000466845 ANP32AP39687 249 aaKnown RBP6.94□□□□□ -1.3
LRCH3-212ENST00000466845 PCBP3P57721 371 aaKnown RBP6.94□□□□□ -1.3
LRCH3-212ENST00000466845 ZNF648Q5T619 568 aaPredicted RBP6.94□□□□□ -1.3
LRCH3-212ENST00000466845 EFCAB2Q5VUJ9 269 aa6.94□□□□□ -1.3
LRCH3-212ENST00000466845 FMNL3Q8IVF7 1028 aa6.94□□□□□ -1.3
LRCH3-212ENST00000466845 LINC00116Q8NCU8 138 aa6.94□□□□□ -1.3
LRCH3-212ENST00000466845 LSM14AQ8ND56 463 aaKnown RBP6.94□□□□□ -1.3
LRCH3-212ENST00000466845 LIN37Q96GY3 246 aaPredicted RBP6.94□□□□□ -1.3
LRCH3-212ENST00000466845 SOGA1O94964 1423 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 AQRO60306 1485 aaKnown RBP eCLIP6.93□□□□□ -1.3
LRCH3-212ENST00000466845 WASH4PA8MWX3 477 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 PRC1O43663 620 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 RGS3P49796 1198 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 TEKQ02763 1124 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 ZNF654Q8IZM8 581 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 RBBP8NLQ8NC74 664 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-212ENST00000466845 RSPH1Q8WYR4 309 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 SMARCC1Q92922 1105 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-212ENST00000466845 TM9SF2Q99805 663 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 HDAC8Q9BY41 377 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 TANGO6Q9C0B7 1094 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 SLC6A17Q9H1V8 727 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 IFT122Q9HBG6 1241 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 PCDH12Q9NPG4 1184 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 ZNRF3Q9ULT6 936 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 WDR97A6NE52 1622 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 CHD1O14646 1710 aa6.93□□□□□ -1.3
LRCH3-212ENST00000466845 RAD54L2Q9Y4B4 1467 aa6.92□□□□□ -1.3
LRCH3-212ENST00000466845 CUX1P39880 1505 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms