RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SUSD5O60279 629 aa6.24□□□□□ -1.41
VPS13D-203ENST00000466732 GJB6O95452 261 aa6.24□□□□□ -1.41
VPS13D-203ENST00000466732 YBX3P16989 372 aaKnown RBP eCLIP6.24□□□□□ -1.41
VPS13D-203ENST00000466732 LAPTM5Q13571 262 aa6.24□□□□□ -1.41
VPS13D-203ENST00000466732 PKN1Q16512 942 aa6.24□□□□□ -1.41
VPS13D-203ENST00000466732 POMZP3Q6PJE2 187 aa6.24□□□□□ -1.41
VPS13D-203ENST00000466732 TRIM59Q8IWR1 403 aa6.24□□□□□ -1.41
VPS13D-203ENST00000466732 CRACR2BQ8N4Y2 399 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-203ENST00000466732 CELF2-AS1Q8N7Q2 184 aa6.24□□□□□ -1.41
VPS13D-203ENST00000466732 BHLHE22Q8NFJ8 381 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-203ENST00000466732 MRGPRX3Q96LB0 322 aa6.24□□□□□ -1.41
VPS13D-203ENST00000466732 C8orf37Q96NL8 207 aa6.24□□□□□ -1.41
VPS13D-203ENST00000466732 A0A1W2PQ27 194 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 A0A1W2PQ64 194 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 A0A1W2PQC6 194 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 A0A1W2PQD8 194 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 KLF4O43474 513 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 MSL3P1P0C860 447 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 SDHBP21912 280 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 ARL4AP40617 200 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 SEPHS1P49903 392 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 ERVFRD-1P60508 538 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 CYP4F8P98187 520 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 MVKQ03426 396 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 SV2CQ496J9 727 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 SLC26A8Q96RN1 970 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 PPP1R16BQ96T49 567 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 MCOLN1Q9GZU1 580 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 ST7Q9NRC1 585 aa6.23□□□□□ -1.41
VPS13D-203ENST00000466732 MYOCOSA0A1B0GUC4 107 aa6.22□□□□□ -1.41
VPS13D-203ENST00000466732 PEX10O60683 326 aa6.22□□□□□ -1.41
VPS13D-203ENST00000466732 KRT1P04264 644 aa6.22□□□□□ -1.41
VPS13D-203ENST00000466732 L1CAMP32004 1257 aa6.22□□□□□ -1.41
VPS13D-203ENST00000466732 DDR2Q16832 855 aa6.22□□□□□ -1.41
VPS13D-203ENST00000466732 GTF2IRD2BQ6EKJ0 949 aa6.22□□□□□ -1.41
VPS13D-203ENST00000466732 GTF2IRD2Q86UP8 949 aa6.22□□□□□ -1.41
VPS13D-203ENST00000466732 TNFRSF12AQ9NP84 129 aa6.22□□□□□ -1.41
VPS13D-203ENST00000466732 TBX1O43435 398 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 TSPAN15O95858 294 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 ITGAVP06756 1048 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 TMEM253P0C7T8 217 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 C1QTNF9P0C862 333 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 SCRN1Q12765 414 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 EEPD1Q7L9B9 569 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 ZNF227Q86WZ6 799 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 BTN2A2Q8WVV5 523 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 COPS5Q92905 334 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 KCNN1Q92952 543 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 TANGO6Q9C0B7 1094 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 NKX2-4Q9H2Z4 354 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 CYP26B1Q9NR63 512 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 LRP2BPQ9P2M1 347 aa6.21□□□□□ -1.42
VPS13D-203ENST00000466732 HRKO00198 91 aa6.2□□□□□ -1.42
VPS13D-203ENST00000466732 ETV2O00321 342 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-203ENST00000466732 NFIBO00712 420 aa6.2□□□□□ -1.42
VPS13D-203ENST00000466732 STK10O94804 968 aaKnown RBP6.2□□□□□ -1.42
VPS13D-203ENST00000466732 MPOP05164 745 aa6.2□□□□□ -1.42
VPS13D-203ENST00000466732 PAMP19021 973 aa6.2□□□□□ -1.42
VPS13D-203ENST00000466732 GLDCP23378 1020 aa6.2□□□□□ -1.42
VPS13D-203ENST00000466732 RAP1GAPP47736 663 aa6.2□□□□□ -1.42
VPS13D-203ENST00000466732 CORO7P57737 925 aa6.2□□□□□ -1.42
VPS13D-203ENST00000466732 YBX1P67809 324 aaKnown RBP6.2□□□□□ -1.42
VPS13D-203ENST00000466732 RAB33AQ14088 237 aa6.2□□□□□ -1.42
VPS13D-203ENST00000466732 CPNE8Q86YQ8 564 aa6.2□□□□□ -1.42
VPS13D-203ENST00000466732 NLGN2Q8NFZ4 835 aa6.2□□□□□ -1.42
VPS13D-203ENST00000466732 GPRC5CQ9NQ84 441 aa6.2□□□□□ -1.42
VPS13D-203ENST00000466732 PDLIM7Q9NR12 457 aa6.2□□□□□ -1.42
VPS13D-203ENST00000466732 KLHL14Q9P2G3 628 aa6.2□□□□□ -1.42
VPS13D-203ENST00000466732 TRBV23OR9-2A0A075B6M9 112 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 NPHP3-ACAD11A0A0J9YXS1 232 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 TEX51A0A1B0GUA7 166 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 DBX1A6NMT0 343 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 SEMA7AO75326 666 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 THBDP07204 575 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 MED14OSP0DP75 135 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 PLS3P13797 630 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 ATP2B1P20020 1258 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 TACR1P25103 407 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 VIPR1P32241 457 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 SRSF3P84103 164 aaKnown RBP6.19□□□□□ -1.42
VPS13D-203ENST00000466732 CYP4F3Q08477 520 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 RAB3GAP1Q15042 981 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 SLC10A6Q3KNW5 377 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 LCE3BQ5TA77 95 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 TMEM132EQ6IEE7 984 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 EPN3Q9H201 632 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 CLEC1BQ9P126 229 aa6.19□□□□□ -1.42
VPS13D-203ENST00000466732 A0A1W2PQJ5 194 aa6.18□□□□□ -1.42
VPS13D-203ENST00000466732 NUDT19A8MXV4 375 aa6.18□□□□□ -1.42
VPS13D-203ENST00000466732 ABLIM1O14639 778 aa6.18□□□□□ -1.42
VPS13D-203ENST00000466732 DLG4P78352 724 aa6.18□□□□□ -1.42
VPS13D-203ENST00000466732 CBX2Q14781 532 aaPredicted RBP6.18□□□□□ -1.42
VPS13D-203ENST00000466732 ATG14Q6ZNE5 492 aa6.18□□□□□ -1.42
VPS13D-203ENST00000466732 CKAP2LQ8IYA6 745 aa6.18□□□□□ -1.42
VPS13D-203ENST00000466732 MMP19Q99542 508 aa6.18□□□□□ -1.42
VPS13D-203ENST00000466732 SGPP1Q9BX95 441 aa6.18□□□□□ -1.42
VPS13D-203ENST00000466732 TRIM55Q9BYV6 548 aa6.18□□□□□ -1.42
VPS13D-203ENST00000466732 GCM1Q9NP62 436 aa6.18□□□□□ -1.42
VPS13D-203ENST00000466732 CD320Q9NPF0 282 aa6.18□□□□□ -1.42
VPS13D-203ENST00000466732 MBD1Q9UIS9 605 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms