RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 RNF32Q9H0A6 362 aa6.09□□□□□ -1.43
CALD1-214ENST00000466704 SP110Q9HB58 689 aa6.09□□□□□ -1.43
CALD1-214ENST00000466704 CWC22Q9HCG8 908 aaKnown RBP6.09□□□□□ -1.43
CALD1-214ENST00000466704 SIRPGQ9P1W8 387 aa6.09□□□□□ -1.43
CALD1-214ENST00000466704 A0A1W2PQ45 241 aaPredicted RBP6.08□□□□□ -1.44
CALD1-214ENST00000466704 A0A1W2PQY0 241 aa6.08□□□□□ -1.44
CALD1-214ENST00000466704 RBL2Q08999 1139 aa6.08□□□□□ -1.44
CALD1-214ENST00000466704 SCRN1Q12765 414 aa6.08□□□□□ -1.44
CALD1-214ENST00000466704 HSF5Q4G112 596 aaPredicted RBP6.08□□□□□ -1.44
CALD1-214ENST00000466704 ST13P5Q8NFI4 369 aaPredicted RBP6.08□□□□□ -1.44
CALD1-214ENST00000466704 BTN2A2Q8WVV5 523 aa6.08□□□□□ -1.44
CALD1-214ENST00000466704 DNAJC2Q99543 621 aaKnown RBP6.08□□□□□ -1.44
CALD1-214ENST00000466704 FAM53CQ9NYF3 392 aa6.08□□□□□ -1.44
CALD1-214ENST00000466704 IQCA1LA6NCM1 817 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 PDPK1O15530 556 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 SNRPB2P08579 225 aaKnown RBP6.07□□□□□ -1.44
CALD1-214ENST00000466704 PAMP19021 973 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 KCNJ6P48051 423 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 GALK1P51570 392 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 LAPTM5Q13571 262 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 SLCO6A1Q86UG4 719 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 TMEM52Q8NDY8 209 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 NUP43Q8NFH3 380 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 LIN37Q96GY3 246 aaPredicted RBP6.07□□□□□ -1.44
CALD1-214ENST00000466704 JMJD8Q96S16 334 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 SLC6A17Q9H1V8 727 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 NKX2-4Q9H2Z4 354 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 CYP26B1Q9NR63 512 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 CCDC180Q9P1Z9 1646 aa6.07□□□□□ -1.44
CALD1-214ENST00000466704 TRBV23OR9-2A0A075B6M9 112 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 ZNF503-AS2A6NEH8 195 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 LRRC10BA6NIK2 292 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 TBX1O43435 398 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 PRKCAP17252 672 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 HOXC12P31275 282 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 PDE6BP35913 854 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 ECI1P42126 302 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 PPP2R2AP63151 447 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 IFRD2Q12894 506 aaPredicted RBP6.06□□□□□ -1.44
CALD1-214ENST00000466704 MLANAQ16655 118 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 MTERF2Q49AM1 385 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 PLCD4Q9BRC7 762 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 IMPACTQ9P2X3 320 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 YBX2Q9Y2T7 364 aaKnown RBP6.06□□□□□ -1.44
CALD1-214ENST00000466704 MSRB2Q9Y3D2 182 aa6.06□□□□□ -1.44
CALD1-214ENST00000466704 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.06□□□□□ -1.44
CALD1-214ENST00000466704 A0A1W2PQJ5 194 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 L1CAMP32004 1257 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 ARL4AP40617 200 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 CYP4F8P98187 520 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 RASGRF1Q13972 1273 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 NLRX1Q86UT6 975 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 CPNE8Q86YQ8 564 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 LRRC47Q8N1G4 583 aaKnown RBP6.05□□□□□ -1.44
CALD1-214ENST00000466704 UBXN4Q92575 508 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 COPS5Q92905 334 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 SGSM3Q96HU1 749 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 INTS4Q96HW7 963 aaKnown RBP6.05□□□□□ -1.44
CALD1-214ENST00000466704 SRPK1Q96SB4 655 aaKnown RBP6.05□□□□□ -1.44
CALD1-214ENST00000466704 DIRC2Q96SL1 478 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 CCDC113Q9H0I3 377 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 NSUN3Q9H649 340 aaKnown RBP6.05□□□□□ -1.44
CALD1-214ENST00000466704 CRTAC1Q9NQ79 661 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 GPRC5CQ9NQ84 441 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 CLEC1BQ9P126 229 aa6.05□□□□□ -1.44
CALD1-214ENST00000466704 NPHP3-ACAD11A0A0J9YXS1 232 aa6.04□□□□□ -1.44
CALD1-214ENST00000466704 A0A1W2PQU0 124 aa6.04□□□□□ -1.44
CALD1-214ENST00000466704 NOTOA8MTQ0 251 aa6.04□□□□□ -1.44
CALD1-214ENST00000466704 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.04□□□□□ -1.44
CALD1-214ENST00000466704 CPP00450 1065 aa6.04□□□□□ -1.44
CALD1-214ENST00000466704 THBDP07204 575 aa6.04□□□□□ -1.44
CALD1-214ENST00000466704 RANGAP1P46060 587 aaPredicted RBP6.04□□□□□ -1.44
CALD1-214ENST00000466704 FZD5Q13467 585 aa6.04□□□□□ -1.44
CALD1-214ENST00000466704 SERINC3Q13530 473 aa6.04□□□□□ -1.44
CALD1-214ENST00000466704 HSP90AA2PQ14568 343 aaPredicted RBP6.04□□□□□ -1.44
CALD1-214ENST00000466704 KIR3DS1Q14943 382 aa6.04□□□□□ -1.44
CALD1-214ENST00000466704 ADGRF1Q5T601 910 aa6.04□□□□□ -1.44
CALD1-214ENST00000466704 SHISA4Q96DD7 197 aa6.04□□□□□ -1.44
CALD1-214ENST00000466704 CCDC140Q96MF4 163 aa6.04□□□□□ -1.44
CALD1-214ENST00000466704 DEPDC7Q96QD5 511 aa6.04□□□□□ -1.44
CALD1-214ENST00000466704 ACSL6Q9UKU0 697 aa6.04□□□□□ -1.44
CALD1-214ENST00000466704 EFEMP2O95967 443 aa6.03□□□□□ -1.44
CALD1-214ENST00000466704 PLS3P13797 630 aa6.03□□□□□ -1.44
CALD1-214ENST00000466704 PNLIPP16233 465 aa6.03□□□□□ -1.44
CALD1-214ENST00000466704 CEBPAP49715 358 aaPredicted RBP6.03□□□□□ -1.44
CALD1-214ENST00000466704 PRR23BQ6ZRT6 265 aa6.03□□□□□ -1.44
CALD1-214ENST00000466704 SPATC1Q76KD6 591 aa6.03□□□□□ -1.44
CALD1-214ENST00000466704 IRF2BP1Q8IU81 584 aa6.03□□□□□ -1.44
CALD1-214ENST00000466704 AARSD1Q9BTE6 412 aaKnown RBP6.03□□□□□ -1.44
CALD1-214ENST00000466704 OSBPL2Q9H1P3 480 aa6.03□□□□□ -1.44
CALD1-214ENST00000466704 EPB41L4BQ9H329 900 aa6.03□□□□□ -1.44
CALD1-214ENST00000466704 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.03□□□□□ -1.44
CALD1-214ENST00000466704 PFDN2Q9UHV9 154 aa6.03□□□□□ -1.44
CALD1-214ENST00000466704 OR14I1A6ND48 311 aa6.02□□□□□ -1.45
CALD1-214ENST00000466704 MEFVO15553 781 aaPredicted RBP6.02□□□□□ -1.45
CALD1-214ENST00000466704 NPHS1O60500 1241 aa6.02□□□□□ -1.45
CALD1-214ENST00000466704 GFRA1P56159 465 aa6.02□□□□□ -1.45
CALD1-214ENST00000466704 MVKQ03426 396 aa6.02□□□□□ -1.45
CALD1-214ENST00000466704 SSRP1Q08945 709 aaKnown RBP6.02□□□□□ -1.45
CALD1-214ENST00000466704 RASA3Q14644 834 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms