RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 RAD21O60216 631 aa17.74■□□□□ 0.43
HMGXB4-206ENST00000466438 KCNJ6P48051 423 aa17.74■□□□□ 0.43
HMGXB4-206ENST00000466438 SLC4A3P48751 1232 aa17.74■□□□□ 0.43
HMGXB4-206ENST00000466438 ZP2Q05996 745 aa17.74■□□□□ 0.43
HMGXB4-206ENST00000466438 NEK9Q8TD19 979 aa17.74■□□□□ 0.43
HMGXB4-206ENST00000466438 KANSL2Q9H9L4 492 aa17.74■□□□□ 0.43
HMGXB4-206ENST00000466438 DCP1AQ9NPI6 582 aaPredicted RBP17.74■□□□□ 0.43
HMGXB4-206ENST00000466438 PRKAG3Q9UGI9 489 aa17.74■□□□□ 0.43
HMGXB4-206ENST00000466438 DBNLQ9UJU6 430 aaKnown RBP17.74■□□□□ 0.43
HMGXB4-206ENST00000466438 PTPRSQ13332 1948 aa17.73■□□□□ 0.43
HMGXB4-206ENST00000466438 PITPNM1O00562 1244 aa17.73■□□□□ 0.43
HMGXB4-206ENST00000466438 IQCF3P0C7M6 154 aa17.73■□□□□ 0.43
HMGXB4-206ENST00000466438 SMPD1P17405 629 aa17.73■□□□□ 0.43
HMGXB4-206ENST00000466438 ERVK-21P61565 698 aa17.73■□□□□ 0.43
HMGXB4-206ENST00000466438 CPXCR1Q8N123 301 aa17.73■□□□□ 0.43
HMGXB4-206ENST00000466438 CHST13Q8NET6 341 aa17.73■□□□□ 0.43
HMGXB4-206ENST00000466438 SDR42E1Q8WUS8 393 aa17.73■□□□□ 0.43
HMGXB4-206ENST00000466438 UPF3BQ9BZI7 483 aaKnown RBP17.73■□□□□ 0.43
HMGXB4-206ENST00000466438 RNF39Q9H2S5 420 aa17.73■□□□□ 0.43
HMGXB4-206ENST00000466438 ANTXR1Q9H6X2 564 aa17.73■□□□□ 0.43
HMGXB4-206ENST00000466438 FAM50BQ9Y247 325 aa17.73■□□□□ 0.43
HMGXB4-206ENST00000466438 Q9Y3F1 56 aa17.73■□□□□ 0.43
HMGXB4-206ENST00000466438 TRIOO75962 3097 aa17.72■□□□□ 0.43
HMGXB4-206ENST00000466438 C19orf67A6NJJ6 358 aa17.72■□□□□ 0.43
HMGXB4-206ENST00000466438 PTGS1P23219 599 aa17.72■□□□□ 0.43
HMGXB4-206ENST00000466438 PRPF38AQ8NAV1 312 aaKnown RBP17.72■□□□□ 0.43
HMGXB4-206ENST00000466438 TGS1Q96RS0 853 aaKnown RBP17.72■□□□□ 0.43
HMGXB4-206ENST00000466438 PRRX2Q99811 253 aa17.72■□□□□ 0.43
HMGXB4-206ENST00000466438 MTUS1Q9ULD2 1270 aa17.72■□□□□ 0.43
HMGXB4-206ENST00000466438 SIP14410 1827 aa17.71■□□□□ 0.43
HMGXB4-206ENST00000466438 H3BQ06 376 aaPredicted RBP17.71■□□□□ 0.43
HMGXB4-206ENST00000466438 ZBED4O75132 1171 aa17.71■□□□□ 0.43
HMGXB4-206ENST00000466438 GNAI2P04899 355 aa17.71■□□□□ 0.43
HMGXB4-206ENST00000466438 CNTN2Q02246 1040 aa17.71■□□□□ 0.43
HMGXB4-206ENST00000466438 OS9Q13438 667 aaPredicted RBP17.71■□□□□ 0.43
HMGXB4-206ENST00000466438 FAM133AQ8N9E0 248 aa17.71■□□□□ 0.43
HMGXB4-206ENST00000466438 RETREG2Q8NC44 543 aa17.71■□□□□ 0.43
HMGXB4-206ENST00000466438 NUP88Q99567 741 aaPredicted RBP17.71■□□□□ 0.43
HMGXB4-206ENST00000466438 ZBED2Q9BTP6 218 aa17.71■□□□□ 0.43
HMGXB4-206ENST00000466438 TLR7Q9NYK1 1049 aaKnown RBP17.71■□□□□ 0.43
HMGXB4-206ENST00000466438 CTDP1Q9Y5B0 961 aaPredicted RBP17.71■□□□□ 0.43
HMGXB4-206ENST00000466438 ASB14A6NK59 587 aa17.7■□□□□ 0.42
HMGXB4-206ENST00000466438 GFRA3O60609 400 aa17.7■□□□□ 0.42
HMGXB4-206ENST00000466438 CDK8P49336 464 aa17.7■□□□□ 0.42
HMGXB4-206ENST00000466438 WDR5P61964 334 aaKnown RBP17.7■□□□□ 0.42
HMGXB4-206ENST00000466438 IQSEC1Q6DN90 963 aa17.7■□□□□ 0.42
HMGXB4-206ENST00000466438 ADHFE1Q8IWW8 467 aa17.7■□□□□ 0.42
HMGXB4-206ENST00000466438 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.7■□□□□ 0.42
HMGXB4-206ENST00000466438 RAVER2Q9HCJ3 691 aaKnown RBP17.7■□□□□ 0.42
HMGXB4-206ENST00000466438 TET1Q8NFU7 2136 aa17.69■□□□□ 0.42
HMGXB4-206ENST00000466438 RAD9AQ99638 391 aa17.69■□□□□ 0.42
HMGXB4-206ENST00000466438 SLC38A10Q9HBR0 1119 aa17.69■□□□□ 0.42
HMGXB4-206ENST00000466438 POLR3EQ9NVU0 708 aa17.69■□□□□ 0.42
HMGXB4-206ENST00000466438 LINC01553A4QN01 128 aa17.68■□□□□ 0.42
HMGXB4-206ENST00000466438 IRS1P35568 1242 aa17.68■□□□□ 0.42
HMGXB4-206ENST00000466438 OAZ1P54368 228 aa17.68■□□□□ 0.42
HMGXB4-206ENST00000466438 BFSP2Q13515 415 aa17.68■□□□□ 0.42
HMGXB4-206ENST00000466438 HERC4Q5GLZ8 1057 aaPredicted RBP17.68■□□□□ 0.42
HMGXB4-206ENST00000466438 C16orf86Q6ZW13 317 aa17.68■□□□□ 0.42
HMGXB4-206ENST00000466438 BMP8AQ7Z5Y6 402 aa17.68■□□□□ 0.42
HMGXB4-206ENST00000466438 TMCO2Q7Z6W1 182 aaPredicted RBP17.68■□□□□ 0.42
HMGXB4-206ENST00000466438 LCORLQ8N3X6 602 aa17.68■□□□□ 0.42
HMGXB4-206ENST00000466438 CCDC8Q9H0W5 538 aaPredicted RBP17.68■□□□□ 0.42
HMGXB4-206ENST00000466438 PDGFCQ9NRA1 345 aa17.68■□□□□ 0.42
HMGXB4-206ENST00000466438 SOWAHBA6NEL2 793 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 GJB5O95377 273 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 PDE6AP16499 860 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 DEFB103AP81534 67 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 PURAQ00577 322 aaKnown RBP17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 SLFN5Q08AF3 891 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 TCF15Q12870 199 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 PKN1Q16512 942 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 LRRFIP1Q32MZ4 808 aaKnown RBP17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 IER5LQ5T953 404 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 SLC9C2Q5TAH2 1124 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 TAPT1Q6NXT6 567 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 KIFC2Q96AC6 838 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 MRPL38Q96DV4 380 aaKnown RBP17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 CTNNA3Q9UI47 895 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 C5orf42Q9H799 3197 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 TECTAO75443 2155 aa17.67■□□□□ 0.42
HMGXB4-206ENST00000466438 SPTBN4Q9H254 2564 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 USP17L12C9JPN9 530 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 USP17L21D6R901 530 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 F5H6K3 240 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 NDUFB10O96000 172 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 KLRC3Q07444 240 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 POLA2Q14181 598 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 TIGD5Q53EQ6 642 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 FAM47CQ5HY64 1035 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 TMEM63BQ5T3F8 832 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 C12orf60Q5U649 245 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 FBXO16Q8IX29 292 aaPredicted RBP17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 PABPC5Q96DU9 382 aaKnown RBP17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 MTG1Q9BT17 334 aaPredicted RBP17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 ACAD9Q9H845 621 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 A1CFQ9NQ94 594 aaKnown RBP17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 HOMER2Q9NSB8 354 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 MUTYHQ9UIF7 546 aa17.66■□□□□ 0.42
HMGXB4-206ENST00000466438 ZFHX2Q9C0A1 2572 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms