RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 CCDC96Q2M329 555 aa24.39■■□□□ 1.49
COL6A1-203ENST00000466285 FAM126BQ8IXS8 530 aa24.39■■□□□ 1.49
COL6A1-203ENST00000466285 CHURC1Q8WUH1 139 aa24.39■■□□□ 1.49
COL6A1-203ENST00000466285 NUP133Q8WUM0 1156 aa24.39■■□□□ 1.49
COL6A1-203ENST00000466285 EVI5LQ96CN4 794 aa24.39■■□□□ 1.49
COL6A1-203ENST00000466285 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.39■■□□□ 1.49
COL6A1-203ENST00000466285 CYP39A1Q9NYL5 469 aa24.39■■□□□ 1.49
COL6A1-203ENST00000466285 GNEQ9Y223 722 aaKnown RBP24.39■■□□□ 1.49
COL6A1-203ENST00000466285 UMODL1Q5DID0 1318 aa24.38■■□□□ 1.49
COL6A1-203ENST00000466285 FGAP02671 866 aa24.38■■□□□ 1.49
COL6A1-203ENST00000466285 SMPD1P17405 629 aa24.38■■□□□ 1.49
COL6A1-203ENST00000466285 RRP12Q5JTH9 1297 aaKnown RBP24.38■■□□□ 1.49
COL6A1-203ENST00000466285 GNASQ5JWF2 1037 aa24.38■■□□□ 1.49
COL6A1-203ENST00000466285 CXCL17Q6UXB2 119 aa24.38■■□□□ 1.49
COL6A1-203ENST00000466285 TBC1D10CQ8IV04 446 aa24.38■■□□□ 1.49
COL6A1-203ENST00000466285 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.38■■□□□ 1.49
COL6A1-203ENST00000466285 GLT1D1Q96MS3 346 aa24.38■■□□□ 1.49
COL6A1-203ENST00000466285 COL25A1Q9BXS0 654 aaPredicted RBP24.38■■□□□ 1.49
COL6A1-203ENST00000466285 PPP1R12CQ9BZL4 782 aa24.38■■□□□ 1.49
COL6A1-203ENST00000466285 GRIN2DO15399 1336 aa24.37■■□□□ 1.49
COL6A1-203ENST00000466285 ELP1O95163 1332 aa24.37■■□□□ 1.49
COL6A1-203ENST00000466285 DCDC2CA8MYV0 355 aa24.37■■□□□ 1.49
COL6A1-203ENST00000466285 NFIBO00712 420 aa24.37■■□□□ 1.49
COL6A1-203ENST00000466285 PLA2G6O60733 806 aa24.37■■□□□ 1.49
COL6A1-203ENST00000466285 TIMP1P01033 207 aa24.37■■□□□ 1.49
COL6A1-203ENST00000466285 TAPT1Q6NXT6 567 aa24.37■■□□□ 1.49
COL6A1-203ENST00000466285 TLK2Q86UE8 772 aa24.37■■□□□ 1.49
COL6A1-203ENST00000466285 TMEM47Q9BQJ4 181 aa24.37■■□□□ 1.49
COL6A1-203ENST00000466285 LNPKQ9C0E8 428 aa24.37■■□□□ 1.49
COL6A1-203ENST00000466285 RANBP17Q9H2T7 1088 aaKnown RBP24.37■■□□□ 1.49
COL6A1-203ENST00000466285 CCPG1Q9ULG6 757 aa24.37■■□□□ 1.49
COL6A1-203ENST00000466285 A0A0U1RQG5 324 aaPredicted RBP24.36■■□□□ 1.49
COL6A1-203ENST00000466285 NKX3-2P78367 333 aa24.36■■□□□ 1.49
COL6A1-203ENST00000466285 TNFAIP2Q03169 654 aa24.36■■□□□ 1.49
COL6A1-203ENST00000466285 HDAC1Q13547 482 aaPredicted RBP24.36■■□□□ 1.49
COL6A1-203ENST00000466285 ALX1Q15699 326 aa24.36■■□□□ 1.49
COL6A1-203ENST00000466285 NSMFQ6X4W1 530 aa24.36■■□□□ 1.49
COL6A1-203ENST00000466285 GPCPD1Q9NPB8 672 aa24.36■■□□□ 1.49
COL6A1-203ENST00000466285 HELLSQ9NRZ9 838 aa24.36■■□□□ 1.49
COL6A1-203ENST00000466285 TOMM22Q9NS69 142 aa24.36■■□□□ 1.49
COL6A1-203ENST00000466285 NEDD4P46934 1319 aa24.35■■□□□ 1.49
COL6A1-203ENST00000466285 GRXCR1A8MXD5 290 aa24.35■■□□□ 1.49
COL6A1-203ENST00000466285 ARVCFO00192 962 aa24.35■■□□□ 1.49
COL6A1-203ENST00000466285 FDX1P10109 184 aa24.35■■□□□ 1.49
COL6A1-203ENST00000466285 ACRP10323 421 aa24.35■■□□□ 1.49
COL6A1-203ENST00000466285 HSPD1P10809 573 aaKnown RBP24.35■■□□□ 1.49
COL6A1-203ENST00000466285 CSF2RAP15509 400 aa24.35■■□□□ 1.49
COL6A1-203ENST00000466285 SLC30A10Q6XR72 485 aa24.35■■□□□ 1.49
COL6A1-203ENST00000466285 PCSK9Q8NBP7 692 aaKnown RBP24.35■■□□□ 1.49
COL6A1-203ENST00000466285 RBAK-RBAKDNI3L0D1 243 aa24.34■■□□□ 1.49
COL6A1-203ENST00000466285 CD4P01730 458 aa24.34■■□□□ 1.49
COL6A1-203ENST00000466285 ICAM1P05362 532 aa24.34■■□□□ 1.49
COL6A1-203ENST00000466285 PSMC6P62333 389 aa24.34■■□□□ 1.49
COL6A1-203ENST00000466285 TKFCQ3LXA3 575 aa24.34■■□□□ 1.49
COL6A1-203ENST00000466285 MFSD5Q6N075 450 aa24.34■■□□□ 1.49
COL6A1-203ENST00000466285 MAFAQ8NHW3 353 aaPredicted RBP24.34■■□□□ 1.49
COL6A1-203ENST00000466285 DCAF4Q8WV16 495 aa24.34■■□□□ 1.49
COL6A1-203ENST00000466285 VTI1AQ96AJ9 217 aa24.34■■□□□ 1.49
COL6A1-203ENST00000466285 SCN5AQ14524 2016 aa24.34■■□□□ 1.49
COL6A1-203ENST00000466285 DNAJB2P25686 324 aa24.33■■□□□ 1.49
COL6A1-203ENST00000466285 CYP2C18P33260 490 aa24.33■■□□□ 1.49
COL6A1-203ENST00000466285 PBX2P40425 430 aa24.33■■□□□ 1.49
COL6A1-203ENST00000466285 MCMDC2Q4G0Z9 681 aa24.33■■□□□ 1.49
COL6A1-203ENST00000466285 TMEM240Q5SV17 173 aa24.33■■□□□ 1.49
COL6A1-203ENST00000466285 SYDE2Q5VT97 1194 aa24.33■■□□□ 1.49
COL6A1-203ENST00000466285 NOL8Q76FK4 1167 aaKnown RBP24.33■■□□□ 1.49
COL6A1-203ENST00000466285 CPVLQ9H3G5 476 aa24.33■■□□□ 1.49
COL6A1-203ENST00000466285 CHD7Q9P2D1 2997 aa24.33■■□□□ 1.49
COL6A1-203ENST00000466285 CCDC171Q6TFL3 1326 aa24.33■■□□□ 1.48
COL6A1-203ENST00000466285 PDHBP11177 359 aa24.32■■□□□ 1.48
COL6A1-203ENST00000466285 BAATQ14032 418 aaPredicted RBP24.32■■□□□ 1.48
COL6A1-203ENST00000466285 GRIN2CQ14957 1233 aa24.32■■□□□ 1.48
COL6A1-203ENST00000466285 FSCN1Q16658 493 aaKnown RBP24.32■■□□□ 1.48
COL6A1-203ENST00000466285 BTNL9Q6UXG8 535 aa24.32■■□□□ 1.48
COL6A1-203ENST00000466285 USP38Q8NB14 1042 aa24.32■■□□□ 1.48
COL6A1-203ENST00000466285 SLC43A3Q8NBI5 491 aa24.32■■□□□ 1.48
COL6A1-203ENST00000466285 PPP1R13LQ8WUF5 828 aa24.32■■□□□ 1.48
COL6A1-203ENST00000466285 CLEC4DQ8WXI8 215 aa24.32■■□□□ 1.48
COL6A1-203ENST00000466285 SPC25Q9HBM1 224 aa24.32■■□□□ 1.48
COL6A1-203ENST00000466285 ZMYM6O95789 1325 aa24.32■■□□□ 1.48
COL6A1-203ENST00000466285 ASB14A6NK59 587 aa24.31■■□□□ 1.48
COL6A1-203ENST00000466285 DYNC1LI2O43237 492 aaPredicted RBP24.31■■□□□ 1.48
COL6A1-203ENST00000466285 TOP1P11387 765 aaKnown RBP24.31■■□□□ 1.48
COL6A1-203ENST00000466285 RASIP1Q5U651 963 aa24.31■■□□□ 1.48
COL6A1-203ENST00000466285 B4GALNT3Q6L9W6 998 aa24.31■■□□□ 1.48
COL6A1-203ENST00000466285 MORC4Q8TE76 937 aa24.31■■□□□ 1.48
COL6A1-203ENST00000466285 MROH7Q68CQ1 1323 aa24.31■■□□□ 1.48
COL6A1-203ENST00000466285 FOSL2P15408 326 aa24.3■■□□□ 1.48
COL6A1-203ENST00000466285 ALDH5A1P51649 535 aaPredicted RBP24.3■■□□□ 1.48
COL6A1-203ENST00000466285 VWCEQ96DN2 955 aa24.3■■□□□ 1.48
COL6A1-203ENST00000466285 ZKSCAN3Q9BRR0 538 aa24.3■■□□□ 1.48
COL6A1-203ENST00000466285 TRPV6Q9H1D0 765 aa24.3■■□□□ 1.48
COL6A1-203ENST00000466285 TANC1Q9C0D5 1861 aa24.3■■□□□ 1.48
COL6A1-203ENST00000466285 SCN10AQ9Y5Y9 1956 aa24.29■■□□□ 1.48
COL6A1-203ENST00000466285 B4GALT4O60513 344 aa24.29■■□□□ 1.48
COL6A1-203ENST00000466285 IGHDP01880 384 aa24.29■■□□□ 1.48
COL6A1-203ENST00000466285 PPP4R3BQ5MIZ7 849 aa24.29■■□□□ 1.48
COL6A1-203ENST00000466285 ZNF365Q70YC5 407 aa24.29■■□□□ 1.48
COL6A1-203ENST00000466285 WNT8AQ9H1J5 351 aa24.29■■□□□ 1.48
COL6A1-203ENST00000466285 CXXC1Q9P0U4 656 aaPredicted RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms