RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 VPS54Q9P1Q0 977 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 RABGAP1Q9Y3P9 1069 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 PCDHA1Q9Y5I3 950 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 PARP14Q460N5 1801 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 OAZ1P54368 228 aa19.46■□□□□ 0.71
EXOSC3-203ENST00000465229 USH1GQ495M9 461 aa19.46■□□□□ 0.71
EXOSC3-203ENST00000465229 GTF3C2Q8WUA4 911 aaPredicted RBP19.46■□□□□ 0.71
EXOSC3-203ENST00000465229 PAGR1Q9BTK6 254 aa19.46■□□□□ 0.71
EXOSC3-203ENST00000465229 CCPG1Q9ULG6 757 aa19.46■□□□□ 0.71
EXOSC3-203ENST00000465229 TCHHQ07283 1943 aa19.46■□□□□ 0.71
EXOSC3-203ENST00000465229 hCG_1984214I3L0E3 225 aa19.45■□□□□ 0.7
EXOSC3-203ENST00000465229 STAT3P40763 770 aa19.45■□□□□ 0.7
EXOSC3-203ENST00000465229 GCLCP48506 637 aaPredicted RBP19.45■□□□□ 0.7
EXOSC3-203ENST00000465229 FOSBP53539 338 aa19.45■□□□□ 0.7
EXOSC3-203ENST00000465229 Q3C1V9 767 aa19.45■□□□□ 0.7
EXOSC3-203ENST00000465229 ZNF713Q8N859 430 aaPredicted RBP19.45■□□□□ 0.7
EXOSC3-203ENST00000465229 SH3GLB2Q9NR46 395 aa19.45■□□□□ 0.7
EXOSC3-203ENST00000465229 RIPK3Q9Y572 518 aa19.45■□□□□ 0.7
EXOSC3-203ENST00000465229 TRAF1Q13077 416 aa19.44■□□□□ 0.7
EXOSC3-203ENST00000465229 PLS1Q14651 629 aa19.44■□□□□ 0.7
EXOSC3-203ENST00000465229 CSPP1Q1MSJ5 1256 aa19.44■□□□□ 0.7
EXOSC3-203ENST00000465229 SNRNP48Q6IEG0 339 aaKnown RBP19.44■□□□□ 0.7
EXOSC3-203ENST00000465229 FBXO18Q8NFZ0 1043 aa19.44■□□□□ 0.7
EXOSC3-203ENST00000465229 C8orf76Q96K31 380 aa19.44■□□□□ 0.7
EXOSC3-203ENST00000465229 TEX13BQ9BXU2 312 aa19.44■□□□□ 0.7
EXOSC3-203ENST00000465229 SPATC1LQ9H0A9 340 aa19.44■□□□□ 0.7
EXOSC3-203ENST00000465229 PNMA2Q9UL42 364 aa19.44■□□□□ 0.7
EXOSC3-203ENST00000465229 CA12O43570 354 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 ALDH1A1P00352 501 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 NAPAP54920 295 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 GPT2Q8TD30 523 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 ZFYVE28Q9HCC9 887 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 KCNJ14Q9UNX9 436 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 SMCHD1A6NHR9 2005 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 ADGRA2Q96PE1 1338 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 TLR2O60603 784 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 ALAS1P13196 640 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 XBP1P17861 261 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 MRE11P49959 708 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 ZNF445P59923 1031 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 ERVK-9P63128 1117 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 ERVK-24P63145 666 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 GUCY1B3Q02153 619 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 CRHR2Q13324 411 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 KRT40Q6A162 431 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 RIOX2Q8IUF8 465 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 ANKRD13CQ8N6S4 541 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 MORF4L1Q9UBU8 362 aa19.43■□□□□ 0.7
EXOSC3-203ENST00000465229 MYH6P13533 1939 aa19.42■□□□□ 0.7
EXOSC3-203ENST00000465229 GPRC5AQ8NFJ5 357 aa19.42■□□□□ 0.7
EXOSC3-203ENST00000465229 TRERF1Q96PN7 1200 aa19.42■□□□□ 0.7
EXOSC3-203ENST00000465229 PHF20Q9BVI0 1012 aa19.42■□□□□ 0.7
EXOSC3-203ENST00000465229 MOV10L1Q9BXT6 1211 aaKnown RBP19.42■□□□□ 0.7
EXOSC3-203ENST00000465229 ZMYND12Q9H0C1 365 aa19.42■□□□□ 0.7
EXOSC3-203ENST00000465229 CPA4Q9UI42 421 aa19.42■□□□□ 0.7
EXOSC3-203ENST00000465229 MRPL11Q9Y3B7 192 aaKnown RBP19.42■□□□□ 0.7
EXOSC3-203ENST00000465229 ABCB11O95342 1321 aa19.42■□□□□ 0.7
EXOSC3-203ENST00000465229 VPS37CA5D8V6 355 aaPredicted RBP19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 SMCO2A6NFE2 343 aa19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 OPLAHO14841 1288 aa19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 BCRP11274 1271 aa19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 NCLP19338 710 aaKnown RBP19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 NLRP5P59047 1200 aa19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 TRIM29Q14134 588 aa19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 PPP1R18Q6NYC8 613 aa19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 C17orf99Q6UX52 265 aa19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 FAM177A1Q8N128 213 aaPredicted RBP19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 CCDC12Q8WUD4 166 aaPredicted RBP19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 CLEC4DQ8WXI8 215 aa19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 CHAMP1Q96JM3 812 aa19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 R3HDMLQ9H3Y0 253 aa19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 HOMER2Q9NSB8 354 aa19.41■□□□□ 0.7
EXOSC3-203ENST00000465229 ESYT2A0FGR8 921 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 NPY5RQ15761 445 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 FAM110CQ1W6H9 321 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 MUM1L1Q5H9M0 696 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 DNAJC5GQ8N7S2 189 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 RGS22Q8NE09 1264 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 CCDC148Q8NFR7 591 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 RNF186Q9NXI6 227 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 COL11A1P12107 1806 aaPredicted RBP19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 A0A0G2JMZ2 1700 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 H3BQV1 296 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 ADAMTS3O15072 1205 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 MMP1P03956 469 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 TKFCQ3LXA3 575 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 CAVIN1Q6NZI2 390 aaKnown RBP19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 TBC1D5Q92609 795 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 PSTPIP2Q9H939 334 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 RNF146Q9NTX7 359 aa19.4■□□□□ 0.7
EXOSC3-203ENST00000465229 NFIBO00712 420 aa19.39■□□□□ 0.69
EXOSC3-203ENST00000465229 SLC25A27O95847 323 aa19.39■□□□□ 0.69
EXOSC3-203ENST00000465229 ERCC3P19447 782 aa19.39■□□□□ 0.69
EXOSC3-203ENST00000465229 PORCNQ9H237 461 aa19.39■□□□□ 0.69
EXOSC3-203ENST00000465229 C6orf50Q9HD87 102 aa19.39■□□□□ 0.69
EXOSC3-203ENST00000465229 RIC8AQ9NPQ8 531 aa19.39■□□□□ 0.69
EXOSC3-203ENST00000465229 TRPA1O75762 1119 aa19.38■□□□□ 0.69
EXOSC3-203ENST00000465229 CALML3P27482 149 aa19.38■□□□□ 0.69
EXOSC3-203ENST00000465229 GNA11P29992 359 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms