RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 ZDHHC9Q9Y397 364 aa10.37□□□□□ -0.75
NUDCD3-204ENST00000464812 MKI67P46013 3256 aaKnown RBP10.37□□□□□ -0.75
NUDCD3-204ENST00000464812 PNMA6FA0A0J9YX94 578 aa10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 OPLAHO14841 1288 aa10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 ZBTB5O15062 677 aa10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 FKTNO75072 461 aa10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 CNMDO75829 334 aa10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 ECM2O94769 699 aaPredicted RBP10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 ALDH1A1P00352 501 aa10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 FASTKD5Q7L8L6 764 aaKnown RBP10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 OTOP1Q7RTM1 612 aa10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 PRPF38AQ8NAV1 312 aaKnown RBP10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 CHURC1Q8WUH1 139 aa10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 P2RX7Q99572 595 aaKnown RBP10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 ZCCHC17Q9NP64 241 aaKnown RBP10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 BTBD7Q9P203 1132 aa10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 ZNF214Q9UL59 606 aaPredicted RBP10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 KCNJ14Q9UNX9 436 aa10.36□□□□□ -0.75
NUDCD3-204ENST00000464812 MYPNQ86TC9 1320 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 KIF28PB7ZC32 967 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 VWA5AO00534 786 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 HERVK_113P62684 666 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 COG2Q14746 738 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 TMEM132BQ14DG7 1078 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 USH1GQ495M9 461 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 FOXD4L5Q5VV16 416 aaPredicted RBP10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 KRT40Q6A162 431 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 FAM184AQ8NB25 1140 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 OXER1Q8TDS5 423 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 FOXD4L4Q8WXT5 416 aaPredicted RBP10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 ABHD8Q96I13 439 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 TRIM47Q96LD4 638 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 AGBL1Q96MI9 1066 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 PHF20Q9BVI0 1012 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 RAVER2Q9HCJ3 691 aaKnown RBP10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 BARHL2Q9NY43 387 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 SEC63Q9UGP8 760 aaKnown RBP10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 ZNF236Q9UL36 1845 aa10.35□□□□□ -0.75
NUDCD3-204ENST00000464812 MCM3APO60318 1980 aa10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 STX6O43752 255 aa10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 ICAM1P05362 532 aa10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 IRX3P78415 501 aaPredicted RBP10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 LACTBP83111 547 aaPredicted RBP10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 AKAP17AQ02040 695 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 SP3Q02447 781 aa10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 Q3C1V9 767 aa10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 LARP1BQ659C4 914 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 LBX2Q6XYB7 198 aa10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 CTU1Q7Z7A3 348 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 FBXO11Q86XK2 927 aa10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 FBXO18Q8NFZ0 1043 aa10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 CHAMP1Q96JM3 812 aa10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 C8orf76Q96K31 380 aa10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 ZFYVE28Q9HCC9 887 aa10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 CWC22Q9HCG8 908 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 RBM27Q9P2N5 1060 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 RBPJLQ9UBG7 517 aa10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 DAXXQ9UER7 740 aaPredicted RBP10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 SLC45A1Q9Y2W3 748 aa10.34□□□□□ -0.75
NUDCD3-204ENST00000464812 KIAA0100Q14667 2235 aaKnown RBP10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 VPS37CA5D8V6 355 aaPredicted RBP10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 FAM205CA6NFA0 338 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 SPDYE4A6NLX3 237 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 hCG_1984214I3L0E3 225 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 BRD1O95696 1058 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 MMP1P03956 469 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 NAPAP54920 295 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 RESTQ13127 1097 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 MKRN4PQ13434 485 aaPredicted RBP10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 MUM1L1Q5H9M0 696 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 IFFO2Q5TF58 517 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 FERMT3Q86UX7 667 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 CPXCR1Q8N123 301 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 ZNF713Q8N859 430 aaPredicted RBP10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 RASGRP4Q8TDF6 673 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 WASF1Q92558 559 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 TNFRSF25Q93038 417 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 PAGR1Q9BTK6 254 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 AMNQ9BXJ7 453 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 CCPG1Q9ULG6 757 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 GABRQQ9UN88 632 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 RIPK3Q9Y572 518 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 PCDHA1Q9Y5I3 950 aa10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 TNRC18O15417 2968 aaPredicted RBP10.33□□□□□ -0.76
NUDCD3-204ENST00000464812 ESYT2A0FGR8 921 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 M0R2N6 131 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 NFIBO00712 420 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 ATP2A1O14983 1001 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 ZBED4O75132 1171 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 ZSCAN22P10073 491 aaPredicted RBP10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 ALAS1P13196 640 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 PDCP20941 246 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 NR5A1Q13285 461 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 PABPC4Q13310 644 aaKnown RBP eCLIP10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 UBE2SQ16763 222 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 EARS2Q5JPH6 523 aaKnown RBP10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 SNRNP48Q6IEG0 339 aaKnown RBP10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 PPP1R18Q6NYC8 613 aa10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 DIS3L2Q8IYB7 885 aaKnown RBP10.32□□□□□ -0.76
NUDCD3-204ENST00000464812 CLEC4DQ8WXI8 215 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms