RNA–Protein interactions for RNA: ENST00000464620.1

ARHGEF16-206, Transcript of Rho guanine nucleotide exchange factor 16, humanhuman

TSL 1 (best)

Gene ARHGEF16, Length 1,403 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16-206ENST00000464620 SNAP25P60880 206 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 HAND2P61296 217 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 SMAD3P84022 425 aaKnown RBP18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 FAAP100Q0VG06 881 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 AKNAD1Q5T1N1 836 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 SYDE2Q5VT97 1194 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 CCSAPQ6IQ19 270 aaPredicted RBP18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 ESR2Q92731 530 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 FAM161BQ96MY7 647 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 TMEM47Q9BQJ4 181 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 DIAPH3Q9NSV4 1193 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 CYP39A1Q9NYL5 469 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 ZNF213O14771 459 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 TIMP1P01033 207 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 NOVP48745 357 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 CCDC178Q5BJE1 867 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 IQSEC1Q6DN90 963 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 SMC5Q8IY18 1101 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 FGD4Q96M96 766 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 SEZ6LQ9BYH1 1024 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 RANBP17Q9H2T7 1088 aaKnown RBP18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 GPCPD1Q9NPB8 672 aa18.32■□□□□ 0.52
ARHGEF16-206ENST00000464620 SMCHD1A6NHR9 2005 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 PTPDC1A2A3K4 754 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 MYADML2A6NDP7 307 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 SOWAHBA6NEL2 793 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 B4DLN1 442 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 ARVCFO00192 962 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 DLL1O00548 723 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 SDSP20132 328 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 SLC16A2P36021 539 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 MRPL12P52815 198 aaKnown RBP18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 MUM1L1Q5H9M0 696 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 BTNL9Q6UXG8 535 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 TLK2Q86UE8 772 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 ZNF589Q86UQ0 364 aaPredicted RBP18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 IQCA1Q86XH1 822 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 TMEM199Q8N511 208 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 VTA1Q9NP79 307 aa18.31■□□□□ 0.52
ARHGEF16-206ENST00000464620 FRMPD2Q68DX3 1309 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF16-206ENST00000464620 LOC102724159A0A0B4J2E5 919 aa18.3■□□□□ 0.52
ARHGEF16-206ENST00000464620 PPIGQ13427 754 aaKnown RBP eCLIP18.3■□□□□ 0.525e-9■■■□□ 18.5
ARHGEF16-206ENST00000464620 PWP2Q15269 919 aaKnown RBP18.3■□□□□ 0.52
ARHGEF16-206ENST00000464620 EEPD1Q7L9B9 569 aa18.3■□□□□ 0.52
ARHGEF16-206ENST00000464620 Q9Y3F1 56 aa18.3■□□□□ 0.52
ARHGEF16-206ENST00000464620 DYNC1LI2O43237 492 aaPredicted RBP18.29■□□□□ 0.52
ARHGEF16-206ENST00000464620 ADCY6O43306 1168 aa18.29■□□□□ 0.52
ARHGEF16-206ENST00000464620 ITGB8P26012 769 aa18.29■□□□□ 0.52
ARHGEF16-206ENST00000464620 CDK7P50613 346 aa18.29■□□□□ 0.52
ARHGEF16-206ENST00000464620 BEX3Q00994 111 aa18.29■□□□□ 0.52
ARHGEF16-206ENST00000464620 FSCN1Q16658 493 aaKnown RBP18.29■□□□□ 0.52
ARHGEF16-206ENST00000464620 GPATCH4Q5T3I0 446 aaKnown RBP18.29■□□□□ 0.52
ARHGEF16-206ENST00000464620 TTBK2Q6IQ55 1244 aa18.29■□□□□ 0.52
ARHGEF16-206ENST00000464620 MFSD5Q6N075 450 aa18.29■□□□□ 0.52
ARHGEF16-206ENST00000464620 KIAA1211Q6ZU35 1233 aa18.29■□□□□ 0.52
ARHGEF16-206ENST00000464620 KATNBL1Q9H079 304 aa18.29■□□□□ 0.52
ARHGEF16-206ENST00000464620 OSBPL3Q9H4L5 887 aa18.29■□□□□ 0.52
ARHGEF16-206ENST00000464620 LTBP2Q14767 1821 aa18.28■□□□□ 0.52
ARHGEF16-206ENST00000464620 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF16-206ENST00000464620 PDHBP11177 359 aa18.28■□□□□ 0.52
ARHGEF16-206ENST00000464620 NUCB1Q02818 461 aa18.28■□□□□ 0.52
ARHGEF16-206ENST00000464620 BAATQ14032 418 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF16-206ENST00000464620 BRDTQ58F21 947 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF16-206ENST00000464620 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
ARHGEF16-206ENST00000464620 RASGRP2Q7LDG7 609 aa18.28■□□□□ 0.52
ARHGEF16-206ENST00000464620 FBXO16Q8IX29 292 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF16-206ENST00000464620 TMEM265A0A087WTH1 108 aa18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 NKX3-2P78367 333 aa18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 IMMTQ16891 758 aaKnown RBP18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 CXCL17Q6UXB2 119 aa18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 RNF207Q6ZRF8 634 aa18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 DGKHQ86XP1 1220 aa18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 PLEKHM2Q8IWE5 1019 aa18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 GUCD1Q96NT3 240 aa18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 SEMA6BQ9H3T3 888 aa18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 KAT14Q9H8E8 782 aa18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 CTNNA3Q9UI47 895 aa18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 TBX21Q9UL17 535 aa18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 GNEQ9Y223 722 aaKnown RBP18.27■□□□□ 0.52
ARHGEF16-206ENST00000464620 SMPD1P17405 629 aa18.26■□□□□ 0.51
ARHGEF16-206ENST00000464620 CALML3P27482 149 aa18.26■□□□□ 0.51
ARHGEF16-206ENST00000464620 IRX5P78411 483 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF16-206ENST00000464620 PDE4DQ08499 809 aa18.26■□□□□ 0.51
ARHGEF16-206ENST00000464620 ZNF543Q08ER8 600 aa18.26■□□□□ 0.51
ARHGEF16-206ENST00000464620 MTIF3Q9H2K0 278 aaKnown RBP18.26■□□□□ 0.51
ARHGEF16-206ENST00000464620 GPHNQ9NQX3 736 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF16-206ENST00000464620 NFIBO00712 420 aa18.25■□□□□ 0.51
ARHGEF16-206ENST00000464620 CPT1AP50416 773 aa18.25■□□□□ 0.51
ARHGEF16-206ENST00000464620 ALDH5A1P51649 535 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF16-206ENST00000464620 ITGA7Q13683 1181 aa18.25■□□□□ 0.51
ARHGEF16-206ENST00000464620 PSRC1Q6PGN9 363 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF16-206ENST00000464620 FAM126BQ8IXS8 530 aa18.25■□□□□ 0.51
ARHGEF16-206ENST00000464620 RAD50Q92878 1312 aa18.25■□□□□ 0.51
ARHGEF16-206ENST00000464620 CDX2Q99626 313 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF16-206ENST00000464620 ZKSCAN3Q9BRR0 538 aa18.25■□□□□ 0.51
ARHGEF16-206ENST00000464620 PPP1R12CQ9BZL4 782 aa18.25■□□□□ 0.51
ARHGEF16-206ENST00000464620 PDGFCQ9NRA1 345 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms