RNA–Protein interactions for RNA: ENST00000464290.5

CRAT-208, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 867 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-208ENST00000464290 PAXIP1Q6ZW49 1069 aaPredicted RBP17.52■□□□□ 0.4
CRAT-208ENST00000464290 BLIDQ8IZY5 108 aa17.52■□□□□ 0.4
CRAT-208ENST00000464290 DAGLBQ8NCG7 672 aa17.52■□□□□ 0.4
CRAT-208ENST00000464290 TNPO1Q92973 898 aaKnown RBP17.52■□□□□ 0.4
CRAT-208ENST00000464290 C6orf50Q9HD87 102 aa17.52■□□□□ 0.4
CRAT-208ENST00000464290 RIC8AQ9NPQ8 531 aa17.52■□□□□ 0.4
CRAT-208ENST00000464290 PNMA3Q9UL41 463 aa17.52■□□□□ 0.4
CRAT-208ENST00000464290 RIPK3Q9Y572 518 aa17.52■□□□□ 0.4
CRAT-208ENST00000464290 ABCB11O95342 1321 aa17.51■□□□□ 0.39
CRAT-208ENST00000464290 ATP2A1O14983 1001 aa17.51■□□□□ 0.39
CRAT-208ENST00000464290 U2AF2P26368 475 aaKnown RBP eCLIP17.51■□□□□ 0.39
CRAT-208ENST00000464290 GNA11P29992 359 aa17.51■□□□□ 0.39
CRAT-208ENST00000464290 ADCY7P51828 1080 aa17.51■□□□□ 0.39
CRAT-208ENST00000464290 GRM1Q13255 1194 aa17.51■□□□□ 0.39
CRAT-208ENST00000464290 FAM173BQ6P4H8 233 aa17.51■□□□□ 0.39
CRAT-208ENST00000464290 MB21D1Q8N884 522 aa17.51■□□□□ 0.39
CRAT-208ENST00000464290 TNFRSF25Q93038 417 aa17.51■□□□□ 0.39
CRAT-208ENST00000464290 FOXP1Q9H334 677 aaPredicted RBP17.51■□□□□ 0.39
CRAT-208ENST00000464290 PSTPIP2Q9H939 334 aa17.51■□□□□ 0.39
CRAT-208ENST00000464290 RBPJLQ9UBG7 517 aa17.51■□□□□ 0.39
CRAT-208ENST00000464290 MRPL11Q9Y3B7 192 aaKnown RBP17.51■□□□□ 0.39
CRAT-208ENST00000464290 A0A0G2JMZ2 1700 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 ALAS1P13196 640 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 STAT3P40763 770 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 INHBEP58166 350 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 NOM1Q5C9Z4 860 aaKnown RBP17.5■□□□□ 0.39
CRAT-208ENST00000464290 SNRNP48Q6IEG0 339 aaKnown RBP17.5■□□□□ 0.39
CRAT-208ENST00000464290 IFNL1Q8IU54 200 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 RASGRP4Q8TDF6 673 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 CLEC4DQ8WXI8 215 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 TBC1D5Q92609 795 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 CHAMP1Q96JM3 812 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 CAPNS2Q96L46 248 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 ZSCAN16Q9H4T2 348 aaPredicted RBP17.5■□□□□ 0.39
CRAT-208ENST00000464290 BRMS1Q9HCU9 246 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 TXNRD2Q9NNW7 524 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 PNMA2Q9UL42 364 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 PCDHA6Q9UN73 950 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 PCDHA8Q9Y5H6 950 aa17.5■□□□□ 0.39
CRAT-208ENST00000464290 MEIS2O14770 477 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 AOC2O75106 756 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 TM4SF4P48230 202 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 MRPL12P52815 198 aaKnown RBP17.49■□□□□ 0.39
CRAT-208ENST00000464290 HTRA3P83110 453 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 PLS1Q14651 629 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 UBE2SQ16763 222 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 FOXD4L6Q3SYB3 417 aaPredicted RBP17.49■□□□□ 0.39
CRAT-208ENST00000464290 MUM1L1Q5H9M0 696 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 EARS2Q5JPH6 523 aaKnown RBP17.49■□□□□ 0.39
CRAT-208ENST00000464290 FOXD4L3Q6VB84 417 aaPredicted RBP17.49■□□□□ 0.39
CRAT-208ENST00000464290 NOSTRINQ8IVI9 506 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 BICD2Q8TD16 824 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 CUL5Q93034 780 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 TRERF1Q96PN7 1200 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 PAGR1Q9BTK6 254 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 TEX13BQ9BXU2 312 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 ZCCHC17Q9NP64 241 aaKnown RBP17.49■□□□□ 0.39
CRAT-208ENST00000464290 BIN2Q9UBW5 565 aaPredicted RBP17.49■□□□□ 0.39
CRAT-208ENST00000464290 RABGAP1Q9Y3P9 1069 aa17.49■□□□□ 0.39
CRAT-208ENST00000464290 FAM205CA6NFA0 338 aa17.48■□□□□ 0.39
CRAT-208ENST00000464290 CLK2P49760 499 aaKnown RBP17.48■□□□□ 0.39
CRAT-208ENST00000464290 SREBF2Q12772 1141 aa17.48■□□□□ 0.39
CRAT-208ENST00000464290 NOGQ13253 232 aa17.48■□□□□ 0.39
CRAT-208ENST00000464290 GNL2Q13823 731 aaKnown RBP17.48■□□□□ 0.39
CRAT-208ENST00000464290 Q3C1V9 767 aa17.48■□□□□ 0.39
CRAT-208ENST00000464290 JAKMIP3Q5VZ66 844 aa17.48■□□□□ 0.39
CRAT-208ENST00000464290 USP17L6PQ6QN14 398 aa17.48■□□□□ 0.39
CRAT-208ENST00000464290 BRAPQ7Z569 592 aa17.48■□□□□ 0.39
CRAT-208ENST00000464290 GTF3C2Q8WUA4 911 aaPredicted RBP17.48■□□□□ 0.39
CRAT-208ENST00000464290 PARK7Q99497 189 aaKnown RBP17.48■□□□□ 0.39
CRAT-208ENST00000464290 SPATC1LQ9H0A9 340 aa17.48■□□□□ 0.39
CRAT-208ENST00000464290 GLT8D2Q9H1C3 349 aa17.48■□□□□ 0.39
CRAT-208ENST00000464290 HOMER2Q9NSB8 354 aa17.48■□□□□ 0.39
CRAT-208ENST00000464290 TMEM260Q9NX78 707 aa17.48■□□□□ 0.39
CRAT-208ENST00000464290 NFIBO00712 420 aa17.47■□□□□ 0.39
CRAT-208ENST00000464290 TKFCQ3LXA3 575 aa17.47■□□□□ 0.39
CRAT-208ENST00000464290 RIOX2Q8IUF8 465 aa17.47■□□□□ 0.39
CRAT-208ENST00000464290 REXO1Q8N1G1 1221 aaKnown RBP17.47■□□□□ 0.39
CRAT-208ENST00000464290 SMCR8Q8TEV9 937 aaPredicted RBP17.47■□□□□ 0.39
CRAT-208ENST00000464290 MOV10L1Q9BXT6 1211 aaKnown RBP17.47■□□□□ 0.39
CRAT-208ENST00000464290 RNF146Q9NTX7 359 aa17.47■□□□□ 0.39
CRAT-208ENST00000464290 PIK3CDO00329 1044 aa17.46■□□□□ 0.39
CRAT-208ENST00000464290 GCLCP48506 637 aaPredicted RBP17.46■□□□□ 0.39
CRAT-208ENST00000464290 MYSM1Q5VVJ2 828 aa17.46■□□□□ 0.39
CRAT-208ENST00000464290 PIK3AP1Q6ZUJ8 805 aa17.46■□□□□ 0.39
CRAT-208ENST00000464290 R3HDMLQ9H3Y0 253 aa17.46■□□□□ 0.39
CRAT-208ENST00000464290 ADGRA2Q96PE1 1338 aa17.46■□□□□ 0.38
CRAT-208ENST00000464290 GCOM1H8Y6P7 765 aaPredicted RBP17.45■□□□□ 0.38
CRAT-208ENST00000464290 CFBP00751 764 aa17.45■□□□□ 0.38
CRAT-208ENST00000464290 POLR2MP0CAP2 368 aa17.45■□□□□ 0.38
CRAT-208ENST00000464290 HOXA13P31271 388 aaPredicted RBP17.45■□□□□ 0.38
CRAT-208ENST00000464290 TOB1P50616 345 aaPredicted RBP17.45■□□□□ 0.38
CRAT-208ENST00000464290 ERVK-9P63128 1117 aa17.45■□□□□ 0.38
CRAT-208ENST00000464290 ERVK-24P63145 666 aa17.45■□□□□ 0.38
CRAT-208ENST00000464290 GHRHRQ02643 423 aa17.45■□□□□ 0.38
CRAT-208ENST00000464290 DNM1Q05193 864 aaKnown RBP17.45■□□□□ 0.38
CRAT-208ENST00000464290 MCF2L2Q86YR7 1114 aa17.45■□□□□ 0.38
CRAT-208ENST00000464290 ANKRD13CQ8N6S4 541 aa17.45■□□□□ 0.38
CRAT-208ENST00000464290 PGBD1Q96JS3 809 aa17.45■□□□□ 0.38
CRAT-208ENST00000464290 MORF4L1Q9UBU8 362 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms