RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 FAM83BQ5T0W9 1011 aa16.53■□□□□ 0.24
COL5A1-205ENST00000464187 CCDC148Q8NFR7 591 aa16.53■□□□□ 0.24
COL5A1-205ENST00000464187 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.53■□□□□ 0.24
COL5A1-205ENST00000464187 MTMR8Q96EF0 704 aa16.53■□□□□ 0.24
COL5A1-205ENST00000464187 KCNH3Q9ULD8 1083 aa16.53■□□□□ 0.24
COL5A1-205ENST00000464187 PPP1R12BO60237 982 aaPredicted RBP16.52■□□□□ 0.24
COL5A1-205ENST00000464187 TPM2P07951 284 aa16.52■□□□□ 0.24
COL5A1-205ENST00000464187 CALML3P27482 149 aa16.52■□□□□ 0.24
COL5A1-205ENST00000464187 TERF1P54274 439 aa16.52■□□□□ 0.24
COL5A1-205ENST00000464187 CCDC144BQ3MJ40 725 aa16.52■□□□□ 0.24
COL5A1-205ENST00000464187 WDR90Q96KV7 1748 aa16.52■□□□□ 0.23
COL5A1-205ENST00000464187 hCG_1984214I3L0E3 225 aa16.52■□□□□ 0.23
COL5A1-205ENST00000464187 POTEIP0CG38 1075 aa16.52■□□□□ 0.23
COL5A1-205ENST00000464187 POTEJP0CG39 1038 aa16.52■□□□□ 0.23
COL5A1-205ENST00000464187 STAT2P52630 851 aa16.52■□□□□ 0.23
COL5A1-205ENST00000464187 NAPAP54920 295 aa16.52■□□□□ 0.23
COL5A1-205ENST00000464187 PNOCQ13519 176 aa16.52■□□□□ 0.23
COL5A1-205ENST00000464187 LONRF3Q496Y0 759 aa16.52■□□□□ 0.23
COL5A1-205ENST00000464187 EARS2Q5JPH6 523 aaKnown RBP16.52■□□□□ 0.23
COL5A1-205ENST00000464187 SPECC1Q5M775 1068 aa16.52■□□□□ 0.23
COL5A1-205ENST00000464187 BTNL9Q6UXG8 535 aa16.52■□□□□ 0.23
COL5A1-205ENST00000464187 KRBA2Q6ZNG9 492 aa16.52■□□□□ 0.23
COL5A1-205ENST00000464187 FAM177A1Q8N128 213 aaPredicted RBP16.52■□□□□ 0.23
COL5A1-205ENST00000464187 ZNF713Q8N859 430 aaPredicted RBP16.52■□□□□ 0.23
COL5A1-205ENST00000464187 CCDC12Q8WUD4 166 aaPredicted RBP16.52■□□□□ 0.23
COL5A1-205ENST00000464187 CDCA5Q96FF9 252 aa16.52■□□□□ 0.23
COL5A1-205ENST00000464187 KIAA1683Q9H0B3 1180 aa16.52■□□□□ 0.23
COL5A1-205ENST00000464187 LRMPQ12912 555 aa16.51■□□□□ 0.23
COL5A1-205ENST00000464187 SPP2Q13103 211 aa16.51■□□□□ 0.23
COL5A1-205ENST00000464187 MTMR2Q13614 643 aa16.51■□□□□ 0.23
COL5A1-205ENST00000464187 NOL9Q5SY16 702 aaKnown RBP16.51■□□□□ 0.23
COL5A1-205ENST00000464187 SYDE2Q5VT97 1194 aa16.51■□□□□ 0.23
COL5A1-205ENST00000464187 COA7Q96BR5 231 aa16.51■□□□□ 0.23
COL5A1-205ENST00000464187 WDR18Q9BV38 432 aa16.51■□□□□ 0.23
COL5A1-205ENST00000464187 ZMYND12Q9H0C1 365 aa16.51■□□□□ 0.23
COL5A1-205ENST00000464187 AS3MTQ9HBK9 375 aa16.51■□□□□ 0.23
COL5A1-205ENST00000464187 PCDHA4Q9UN74 947 aa16.51■□□□□ 0.23
COL5A1-205ENST00000464187 CEP131Q9UPN4 1083 aa16.51■□□□□ 0.23
COL5A1-205ENST00000464187 CLEC11AQ9Y240 323 aa16.51■□□□□ 0.23
COL5A1-205ENST00000464187 SRPRBQ9Y5M8 271 aaKnown RBP16.51■□□□□ 0.23
COL5A1-205ENST00000464187 ZHX2Q9Y6X8 837 aa16.51■□□□□ 0.23
COL5A1-205ENST00000464187 ATAD5Q96QE3 1844 aa16.51■□□□□ 0.23
COL5A1-205ENST00000464187 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
COL5A1-205ENST00000464187 ADAMTS3O15072 1205 aa16.5■□□□□ 0.23
COL5A1-205ENST00000464187 PPP1R11O60927 126 aaPredicted RBP16.5■□□□□ 0.23
COL5A1-205ENST00000464187 ATP2B1P20020 1258 aa16.5■□□□□ 0.23
COL5A1-205ENST00000464187 NF2P35240 595 aa16.5■□□□□ 0.23
COL5A1-205ENST00000464187 CDC37Q16543 378 aaPredicted RBP16.5■□□□□ 0.23
COL5A1-205ENST00000464187 QRICH1Q2TAL8 776 aa16.5■□□□□ 0.23
COL5A1-205ENST00000464187 GALNT17Q6IS24 598 aa16.5■□□□□ 0.23
COL5A1-205ENST00000464187 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.5■□□□□ 0.23
COL5A1-205ENST00000464187 BLIDQ8IZY5 108 aa16.5■□□□□ 0.23
COL5A1-205ENST00000464187 ZNF579Q8NAF0 562 aaKnown RBP16.5■□□□□ 0.23
COL5A1-205ENST00000464187 ZNF280CQ8ND82 737 aa16.5■□□□□ 0.23
COL5A1-205ENST00000464187 CNNM3Q8NE01 707 aa16.5■□□□□ 0.23
COL5A1-205ENST00000464187 LPAR1Q92633 364 aa16.5■□□□□ 0.23
COL5A1-205ENST00000464187 TNFRSF25Q93038 417 aa16.5■□□□□ 0.23
COL5A1-205ENST00000464187 RRAGCQ9HB90 399 aa16.5■□□□□ 0.23
COL5A1-205ENST00000464187 MORC2Q9Y6X9 1032 aaPredicted RBP16.5■□□□□ 0.23
COL5A1-205ENST00000464187 SMCO2A6NFE2 343 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 MAP3K9P80192 1104 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 DGKZQ13574 1117 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 VGLL4Q14135 290 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 NCAPHQ15003 741 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 ISM2Q6H9L7 571 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 FAM13BQ9NYF5 915 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 PRR12Q9ULL5 1215 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 TRIM75PA6NK02 468 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 GNA11P29992 359 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 IREB2P48200 963 aaKnown RBP16.49■□□□□ 0.23
COL5A1-205ENST00000464187 USP14P54578 494 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 BACE1P56817 501 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 NOM1Q5C9Z4 860 aaKnown RBP16.49■□□□□ 0.23
COL5A1-205ENST00000464187 ELOA2Q8IYF1 753 aaPredicted RBP16.49■□□□□ 0.23
COL5A1-205ENST00000464187 DAGLBQ8NCG7 672 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 CHURC1Q8WUH1 139 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 C6orf50Q9HD87 102 aa16.49■□□□□ 0.23
COL5A1-205ENST00000464187 DOCK1Q14185 1865 aa16.48■□□□□ 0.23
COL5A1-205ENST00000464187 M0R2N6 131 aa16.48■□□□□ 0.23
COL5A1-205ENST00000464187 WNT7AO00755 349 aa16.48■□□□□ 0.23
COL5A1-205ENST00000464187 WDR46O15213 610 aaKnown RBP16.48■□□□□ 0.23
COL5A1-205ENST00000464187 FOXN1O15353 648 aa16.48■□□□□ 0.23
COL5A1-205ENST00000464187 PLA2G6O60733 806 aa16.48■□□□□ 0.23
COL5A1-205ENST00000464187 SNAP25P60880 206 aa16.48■□□□□ 0.23
COL5A1-205ENST00000464187 MDM2Q00987 491 aaPredicted RBP16.48■□□□□ 0.23
COL5A1-205ENST00000464187 MAP1SQ66K74 1059 aaPredicted RBP16.48■□□□□ 0.23
COL5A1-205ENST00000464187 PIK3AP1Q6ZUJ8 805 aa16.48■□□□□ 0.23
COL5A1-205ENST00000464187 RASGRP4Q8TDF6 673 aa16.48■□□□□ 0.23
COL5A1-205ENST00000464187 CACTINQ8WUQ7 758 aaKnown RBP16.48■□□□□ 0.23
COL5A1-205ENST00000464187 KIFC2Q96AC6 838 aa16.48■□□□□ 0.23
COL5A1-205ENST00000464187 EMILIN3Q9NT22 766 aa16.48■□□□□ 0.23
COL5A1-205ENST00000464187 FEM1BQ9UK73 627 aa16.48■□□□□ 0.23
COL5A1-205ENST00000464187 CSADQ9Y600 493 aa16.48■□□□□ 0.23
COL5A1-205ENST00000464187 SNCAIPQ9Y6H5 919 aa16.48■□□□□ 0.23
COL5A1-205ENST00000464187 ESYT2A0FGR8 921 aa16.47■□□□□ 0.23
COL5A1-205ENST00000464187 IKBKBO14920 756 aa16.47■□□□□ 0.23
COL5A1-205ENST00000464187 DNTTIP2Q5QJE6 756 aaKnown RBP16.47■□□□□ 0.23
COL5A1-205ENST00000464187 FAM160B2Q86V87 743 aa16.47■□□□□ 0.23
COL5A1-205ENST00000464187 CSRNP2Q9H175 543 aa16.47■□□□□ 0.23
COL5A1-205ENST00000464187 FBXO28Q9NVF7 368 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms