RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 SOWAHBA6NEL2 793 aa20.54■□□□□ 0.88
HMGN1-209ENST00000463631 SLC3A2P08195 630 aaKnown RBP20.54■□□□□ 0.88
HMGN1-209ENST00000463631 BEX3Q00994 111 aa20.54■□□□□ 0.88
HMGN1-209ENST00000463631 RAB30Q15771 203 aa20.54■□□□□ 0.88
HMGN1-209ENST00000463631 FSCN1Q16658 493 aaKnown RBP20.54■□□□□ 0.88
HMGN1-209ENST00000463631 TLK2Q86UE8 772 aa20.54■□□□□ 0.88
HMGN1-209ENST00000463631 GRXCR1A8MXD5 290 aa20.53■□□□□ 0.88
HMGN1-209ENST00000463631 ACRP10323 421 aa20.53■□□□□ 0.88
HMGN1-209ENST00000463631 CYP2C18P33260 490 aa20.53■□□□□ 0.88
HMGN1-209ENST00000463631 SLC1A4P43007 532 aa20.53■□□□□ 0.88
HMGN1-209ENST00000463631 TFAP4Q01664 338 aa20.53■□□□□ 0.88
HMGN1-209ENST00000463631 PPARAQ07869 468 aa20.53■□□□□ 0.88
HMGN1-209ENST00000463631 CXCL17Q6UXB2 119 aa20.53■□□□□ 0.88
HMGN1-209ENST00000463631 AGBL1Q96MI9 1066 aa20.53■□□□□ 0.88
HMGN1-209ENST00000463631 NAPBQ9H115 298 aa20.53■□□□□ 0.88
HMGN1-209ENST00000463631 MTIF3Q9H2K0 278 aaKnown RBP20.53■□□□□ 0.88
HMGN1-209ENST00000463631 TRERF1Q96PN7 1200 aa20.52■□□□□ 0.88
HMGN1-209ENST00000463631 SEC62Q99442 399 aaKnown RBP20.52■□□□□ 0.88
HMGN1-209ENST00000463631 HIPK3Q9H422 1215 aa20.52■□□□□ 0.88
HMGN1-209ENST00000463631 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.52■□□□□ 0.88
HMGN1-209ENST00000463631 Q9Y3F1 56 aa20.52■□□□□ 0.88
HMGN1-209ENST00000463631 GRIN2DO15399 1336 aa20.52■□□□□ 0.87
HMGN1-209ENST00000463631 SMPD1P17405 629 aa20.51■□□□□ 0.87
HMGN1-209ENST00000463631 ITGA7Q13683 1181 aa20.51■□□□□ 0.87
HMGN1-209ENST00000463631 ZMYM1Q5SVZ6 1142 aa20.51■□□□□ 0.87
HMGN1-209ENST00000463631 DIEXFQ68CQ4 756 aaKnown RBP20.51■□□□□ 0.87
HMGN1-209ENST00000463631 NOL8Q76FK4 1167 aaKnown RBP20.51■□□□□ 0.87
HMGN1-209ENST00000463631 PI4K2BQ8TCG2 481 aa20.51■□□□□ 0.87
HMGN1-209ENST00000463631 MORC4Q8TE76 937 aa20.51■□□□□ 0.87
HMGN1-209ENST00000463631 ATXN2LQ8WWM7 1075 aaKnown RBP20.51■□□□□ 0.87
HMGN1-209ENST00000463631 NOC4LQ9BVI4 516 aaKnown RBP20.51■□□□□ 0.87
HMGN1-209ENST00000463631 AP5M1Q9H0R1 490 aa20.51■□□□□ 0.87
HMGN1-209ENST00000463631 PRDM12Q9H4Q4 367 aa20.51■□□□□ 0.87
HMGN1-209ENST00000463631 CYP39A1Q9NYL5 469 aa20.51■□□□□ 0.87
HMGN1-209ENST00000463631 CXXC1Q9P0U4 656 aaPredicted RBP20.51■□□□□ 0.87
HMGN1-209ENST00000463631 MSRAQ9UJ68 235 aa20.51■□□□□ 0.87
HMGN1-209ENST00000463631 ERC2O15083 957 aa20.5■□□□□ 0.87
HMGN1-209ENST00000463631 ALAS1P13196 640 aa20.5■□□□□ 0.87
HMGN1-209ENST00000463631 MCCP23508 829 aa20.5■□□□□ 0.87
HMGN1-209ENST00000463631 IKQ13123 557 aaPredicted RBP20.5■□□□□ 0.87
HMGN1-209ENST00000463631 IQSEC1Q6DN90 963 aa20.5■□□□□ 0.87
HMGN1-209ENST00000463631 RCSD1Q6JBY9 416 aa20.5■□□□□ 0.87
HMGN1-209ENST00000463631 TAPT1Q6NXT6 567 aa20.5■□□□□ 0.87
HMGN1-209ENST00000463631 VTA1Q9NP79 307 aa20.5■□□□□ 0.87
HMGN1-209ENST00000463631 THEGQ9P2T0 379 aa20.5■□□□□ 0.87
HMGN1-209ENST00000463631 PRR12Q9ULL5 1215 aa20.5■□□□□ 0.87
HMGN1-209ENST00000463631 ISY1Q9ULR0 285 aaKnown RBP20.5■□□□□ 0.87
HMGN1-209ENST00000463631 STX8Q9UNK0 236 aa20.5■□□□□ 0.87
HMGN1-209ENST00000463631 UMODL1Q5DID0 1318 aa20.5■□□□□ 0.87
HMGN1-209ENST00000463631 TNFRSF10AO00220 468 aa20.49■□□□□ 0.87
HMGN1-209ENST00000463631 FOXP2O15409 715 aa20.49■□□□□ 0.87
HMGN1-209ENST00000463631 ZEB2O60315 1214 aa20.49■□□□□ 0.87
HMGN1-209ENST00000463631 FGBP02675 491 aa20.49■□□□□ 0.87
HMGN1-209ENST00000463631 NOVP48745 357 aa20.49■□□□□ 0.87
HMGN1-209ENST00000463631 WNT8AQ9H1J5 351 aa20.49■□□□□ 0.87
HMGN1-209ENST00000463631 IL17RBQ9NRM6 502 aa20.49■□□□□ 0.87
HMGN1-209ENST00000463631 LOC102724159A0A0B4J2E5 919 aa20.48■□□□□ 0.87
HMGN1-209ENST00000463631 B4GALT4O60513 344 aa20.48■□□□□ 0.87
HMGN1-209ENST00000463631 ICAM1P05362 532 aa20.48■□□□□ 0.87
HMGN1-209ENST00000463631 ADGRE1Q14246 886 aa20.48■□□□□ 0.87
HMGN1-209ENST00000463631 PWP2Q15269 919 aaKnown RBP20.48■□□□□ 0.87
HMGN1-209ENST00000463631 MUM1L1Q5H9M0 696 aa20.48■□□□□ 0.87
HMGN1-209ENST00000463631 KCTD1Q719H9 257 aa20.48■□□□□ 0.87
HMGN1-209ENST00000463631 FBXO16Q8IX29 292 aaPredicted RBP20.48■□□□□ 0.87
HMGN1-209ENST00000463631 FSD1Q9BTV5 496 aa20.48■□□□□ 0.87
HMGN1-209ENST00000463631 TSPY2A6NKD2 308 aa20.47■□□□□ 0.87
HMGN1-209ENST00000463631 DYNC1LI2O43237 492 aaPredicted RBP20.47■□□□□ 0.87
HMGN1-209ENST00000463631 TRPV6Q9H1D0 765 aa20.47■□□□□ 0.87
HMGN1-209ENST00000463631 SLC28A3Q9HAS3 691 aa20.47■□□□□ 0.87
HMGN1-209ENST00000463631 PDGFCQ9NRA1 345 aa20.47■□□□□ 0.87
HMGN1-209ENST00000463631 ANAPC4Q9UJX5 808 aa20.47■□□□□ 0.87
HMGN1-209ENST00000463631 CCPG1Q9ULG6 757 aa20.47■□□□□ 0.87
HMGN1-209ENST00000463631 YBX2Q9Y2T7 364 aaKnown RBP20.47■□□□□ 0.87
HMGN1-209ENST00000463631 PTGS1P23219 599 aa20.46■□□□□ 0.87
HMGN1-209ENST00000463631 DUSP28Q4G0W2 176 aa20.46■□□□□ 0.87
HMGN1-209ENST00000463631 RASGRP2Q7LDG7 609 aa20.46■□□□□ 0.87
HMGN1-209ENST00000463631 DCAF4Q8WV16 495 aa20.46■□□□□ 0.87
HMGN1-209ENST00000463631 VWCEQ96DN2 955 aa20.46■□□□□ 0.87
HMGN1-209ENST00000463631 ASB2Q96Q27 587 aa20.46■□□□□ 0.87
HMGN1-209ENST00000463631 RANBP17Q9H2T7 1088 aaKnown RBP20.46■□□□□ 0.87
HMGN1-209ENST00000463631 NKX2-4Q9H2Z4 354 aa20.46■□□□□ 0.87
HMGN1-209ENST00000463631 DDX49Q9Y6V7 483 aaKnown RBP20.46■□□□□ 0.87
HMGN1-209ENST00000463631 SCN10AQ9Y5Y9 1956 aa20.46■□□□□ 0.87
HMGN1-209ENST00000463631 ORC4O43929 436 aa20.45■□□□□ 0.86
HMGN1-209ENST00000463631 NMT2O60551 498 aa20.45■□□□□ 0.86
HMGN1-209ENST00000463631 CCL23P55773 120 aa20.45■□□□□ 0.86
HMGN1-209ENST00000463631 BTNL9Q6UXG8 535 aa20.45■□□□□ 0.86
HMGN1-209ENST00000463631 NSMFQ6X4W1 530 aa20.45■□□□□ 0.86
HMGN1-209ENST00000463631 EEPD1Q7L9B9 569 aa20.45■□□□□ 0.86
HMGN1-209ENST00000463631 OTOP2Q7RTS6 562 aa20.45■□□□□ 0.86
HMGN1-209ENST00000463631 RPUSD2Q8IZ73 545 aaKnown RBP20.45■□□□□ 0.86
HMGN1-209ENST00000463631 ALDH8A1Q9H2A2 487 aaPredicted RBP20.45■□□□□ 0.86
HMGN1-209ENST00000463631 ADD3Q9UEY8 706 aaKnown RBP20.45■□□□□ 0.86
HMGN1-209ENST00000463631 REV3LO60673 3130 aa20.45■□□□□ 0.86
HMGN1-209ENST00000463631 TANC1Q9C0D5 1861 aa20.44■□□□□ 0.86
HMGN1-209ENST00000463631 PFKMP08237 780 aa20.44■□□□□ 0.86
HMGN1-209ENST00000463631 FGRP09769 529 aa20.44■□□□□ 0.86
HMGN1-209ENST00000463631 SNAP25P60880 206 aa20.44■□□□□ 0.86
HMGN1-209ENST00000463631 PSMC6P62333 389 aa20.44■□□□□ 0.86
HMGN1-209ENST00000463631 TMEM63BQ5T3F8 832 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms