RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 FOXP2O15409 715 aa27.47■■□□□ 1.99
SSNA1-203ENST00000463511 ALAS1P13196 640 aa27.47■■□□□ 1.99
SSNA1-203ENST00000463511 CSF2RAP15509 400 aa27.47■■□□□ 1.99
SSNA1-203ENST00000463511 SNAP25P60880 206 aa27.47■■□□□ 1.99
SSNA1-203ENST00000463511 CTDSPL2Q05D32 466 aa27.47■■□□□ 1.99
SSNA1-203ENST00000463511 B4GALNT3Q6L9W6 998 aa27.47■■□□□ 1.99
SSNA1-203ENST00000463511 CCDC174Q6PII3 467 aa27.47■■□□□ 1.99
SSNA1-203ENST00000463511 CCDC129Q6ZRS4 1044 aa27.47■■□□□ 1.99
SSNA1-203ENST00000463511 C16orf59Q7L2K0 433 aa27.47■■□□□ 1.99
SSNA1-203ENST00000463511 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.47■■□□□ 1.99
SSNA1-203ENST00000463511 DDX49Q9Y6V7 483 aaKnown RBP27.47■■□□□ 1.99
SSNA1-203ENST00000463511 TSPY2A6NKD2 308 aa27.46■■□□□ 1.99
SSNA1-203ENST00000463511 TLR3O15455 904 aaKnown RBP27.46■■□□□ 1.99
SSNA1-203ENST00000463511 NMT2O60551 498 aa27.46■■□□□ 1.99
SSNA1-203ENST00000463511 MX1P20591 662 aa27.46■■□□□ 1.99
SSNA1-203ENST00000463511 TMEM240Q5SV17 173 aa27.46■■□□□ 1.99
SSNA1-203ENST00000463511 INCENPQ9NQS7 918 aa27.46■■□□□ 1.99
SSNA1-203ENST00000463511 IL17RBQ9NRM6 502 aa27.46■■□□□ 1.99
SSNA1-203ENST00000463511 ASB14A6NK59 587 aa27.45■■□□□ 1.98
SSNA1-203ENST00000463511 ACRP10323 421 aa27.45■■□□□ 1.98
SSNA1-203ENST00000463511 PTGS1P23219 599 aa27.45■■□□□ 1.98
SSNA1-203ENST00000463511 TKFCQ3LXA3 575 aa27.45■■□□□ 1.98
SSNA1-203ENST00000463511 PPP4R3BQ5MIZ7 849 aa27.45■■□□□ 1.98
SSNA1-203ENST00000463511 CXCL17Q6UXB2 119 aa27.45■■□□□ 1.98
SSNA1-203ENST00000463511 TLK2Q86UE8 772 aa27.45■■□□□ 1.98
SSNA1-203ENST00000463511 TMEM199Q8N511 208 aa27.45■■□□□ 1.98
SSNA1-203ENST00000463511 TIFAQ96CG3 184 aa27.45■■□□□ 1.98
SSNA1-203ENST00000463511 ZNF576Q9H609 170 aa27.45■■□□□ 1.98
SSNA1-203ENST00000463511 MTMR7Q9Y216 660 aa27.45■■□□□ 1.98
SSNA1-203ENST00000463511 PLA2G6O60733 806 aa27.44■■□□□ 1.98
SSNA1-203ENST00000463511 NKX3-2P78367 333 aa27.44■■□□□ 1.98
SSNA1-203ENST00000463511 NUCB1Q02818 461 aa27.44■■□□□ 1.98
SSNA1-203ENST00000463511 MUM1L1Q5H9M0 696 aa27.44■■□□□ 1.98
SSNA1-203ENST00000463511 ERICH6BQ5W0A0 696 aa27.44■■□□□ 1.98
SSNA1-203ENST00000463511 ZBTB47Q9UFB7 747 aaPredicted RBP27.44■■□□□ 1.98
SSNA1-203ENST00000463511 PRR12Q9ULL5 1215 aa27.44■■□□□ 1.98
SSNA1-203ENST00000463511 GNEQ9Y223 722 aaKnown RBP27.44■■□□□ 1.98
SSNA1-203ENST00000463511 GRXCR1A8MXD5 290 aa27.43■■□□□ 1.98
SSNA1-203ENST00000463511 PBX2P40425 430 aa27.43■■□□□ 1.98
SSNA1-203ENST00000463511 FSCN1Q16658 493 aaKnown RBP27.43■■□□□ 1.98
SSNA1-203ENST00000463511 RCSD1Q6JBY9 416 aa27.43■■□□□ 1.98
SSNA1-203ENST00000463511 CD4P01730 458 aa27.42■■□□□ 1.98
SSNA1-203ENST00000463511 CYP2C18P33260 490 aa27.42■■□□□ 1.98
SSNA1-203ENST00000463511 RASIP1Q5U651 963 aa27.42■■□□□ 1.98
SSNA1-203ENST00000463511 PSRC1Q6PGN9 363 aaPredicted RBP27.42■■□□□ 1.98
SSNA1-203ENST00000463511 ZNF365Q70YC5 407 aa27.42■■□□□ 1.98
SSNA1-203ENST00000463511 EEPD1Q7L9B9 569 aa27.42■■□□□ 1.98
SSNA1-203ENST00000463511 CHD1LQ86WJ1 897 aa27.42■■□□□ 1.98
SSNA1-203ENST00000463511 FBXO16Q8IX29 292 aaPredicted RBP27.42■■□□□ 1.98
SSNA1-203ENST00000463511 PBX4Q9BYU1 374 aa27.42■■□□□ 1.98
SSNA1-203ENST00000463511 LNPKQ9C0E8 428 aa27.42■■□□□ 1.98
SSNA1-203ENST00000463511 PDGFCQ9NRA1 345 aa27.42■■□□□ 1.98
SSNA1-203ENST00000463511 CYP39A1Q9NYL5 469 aa27.42■■□□□ 1.98
SSNA1-203ENST00000463511 CCPG1Q9ULG6 757 aa27.42■■□□□ 1.98
SSNA1-203ENST00000463511 CHD9Q3L8U1 2897 aa27.42■■□□□ 1.98
SSNA1-203ENST00000463511 RANBP6O60518 1105 aaKnown RBP27.41■■□□□ 1.98
SSNA1-203ENST00000463511 SMPD1P17405 629 aa27.41■■□□□ 1.98
SSNA1-203ENST00000463511 CCDC96Q2M329 555 aa27.41■■□□□ 1.98
SSNA1-203ENST00000463511 VPS53Q5VIR6 699 aa27.41■■□□□ 1.98
SSNA1-203ENST00000463511 NSMFQ6X4W1 530 aa27.41■■□□□ 1.98
SSNA1-203ENST00000463511 USP38Q8NB14 1042 aa27.41■■□□□ 1.98
SSNA1-203ENST00000463511 AP5M1Q9H0R1 490 aa27.41■■□□□ 1.98
SSNA1-203ENST00000463511 SALL3Q9BXA9 1300 aa27.41■■□□□ 1.98
SSNA1-203ENST00000463511 SLC43A3Q8NBI5 491 aa27.4■■□□□ 1.98
SSNA1-203ENST00000463511 PURBQ96QR8 312 aaKnown RBP27.4■■□□□ 1.98
SSNA1-203ENST00000463511 DYNC1LI2O43237 492 aaPredicted RBP27.39■■□□□ 1.98
SSNA1-203ENST00000463511 ITGA7Q13683 1181 aa27.39■■□□□ 1.98
SSNA1-203ENST00000463511 TMEM63BQ5T3F8 832 aa27.39■■□□□ 1.98
SSNA1-203ENST00000463511 TAPT1Q6NXT6 567 aa27.39■■□□□ 1.98
SSNA1-203ENST00000463511 HIPK3Q9H422 1215 aa27.39■■□□□ 1.98
SSNA1-203ENST00000463511 IL23AQ9NPF7 189 aa27.39■■□□□ 1.98
SSNA1-203ENST00000463511 ANAPC4Q9UJX5 808 aa27.39■■□□□ 1.98
SSNA1-203ENST00000463511 UMODL1Q5DID0 1318 aa27.39■■□□□ 1.97
SSNA1-203ENST00000463511 TTC28Q96AY4 2481 aa27.39■■□□□ 1.97
SSNA1-203ENST00000463511 CABYRO75952 493 aa27.38■■□□□ 1.97
SSNA1-203ENST00000463511 GRIN2DO15399 1336 aa27.38■■□□□ 1.97
SSNA1-203ENST00000463511 ICAM1P05362 532 aa27.37■■□□□ 1.97
SSNA1-203ENST00000463511 SCN5AQ14524 2016 aa27.37■■□□□ 1.97
SSNA1-203ENST00000463511 DCAF4Q8WV16 495 aa27.37■■□□□ 1.97
SSNA1-203ENST00000463511 CCDC136Q96JN2 1154 aa27.37■■□□□ 1.97
SSNA1-203ENST00000463511 TOMM22Q9NS69 142 aa27.37■■□□□ 1.97
SSNA1-203ENST00000463511 ORC4O43929 436 aa27.36■■□□□ 1.97
SSNA1-203ENST00000463511 ZEB2O60315 1214 aa27.36■■□□□ 1.97
SSNA1-203ENST00000463511 SLC16A2P36021 539 aa27.36■■□□□ 1.97
SSNA1-203ENST00000463511 NOVP48745 357 aa27.36■■□□□ 1.97
SSNA1-203ENST00000463511 PSMC6P62333 389 aa27.36■■□□□ 1.97
SSNA1-203ENST00000463511 IQSEC1Q6DN90 963 aa27.36■■□□□ 1.97
SSNA1-203ENST00000463511 TTBK2Q6IQ55 1244 aa27.36■■□□□ 1.97
SSNA1-203ENST00000463511 TRPV6Q9H1D0 765 aa27.36■■□□□ 1.97
SSNA1-203ENST00000463511 RANBP17Q9H2T7 1088 aaKnown RBP27.36■■□□□ 1.97
SSNA1-203ENST00000463511 VTA1Q9NP79 307 aa27.36■■□□□ 1.97
SSNA1-203ENST00000463511 CXXC1Q9P0U4 656 aaPredicted RBP27.36■■□□□ 1.97
SSNA1-203ENST00000463511 KIAA1211Q6ZU35 1233 aa27.35■■□□□ 1.97
SSNA1-203ENST00000463511 CENPQQ7L2Z9 268 aaPredicted RBP27.35■■□□□ 1.97
SSNA1-203ENST00000463511 HERVK_113Q902F9 699 aa27.35■■□□□ 1.97
SSNA1-203ENST00000463511 EVI5LQ96CN4 794 aa27.35■■□□□ 1.97
SSNA1-203ENST00000463511 GAS2L1Q99501 681 aaPredicted RBP27.35■■□□□ 1.97
SSNA1-203ENST00000463511 PRDM12Q9H4Q4 367 aa27.35■■□□□ 1.97
SSNA1-203ENST00000463511 PPP4R2Q9NY27 417 aa27.35■■□□□ 1.97
SSNA1-203ENST00000463511 MUC3AQ02505 3323 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms