RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 MUM1L1Q5H9M0 696 aa16.01■□□□□ 0.15
PHACTR4-203ENST00000463428 FAM184AQ8NB25 1140 aa16.01■□□□□ 0.15
PHACTR4-203ENST00000463428 ABCB11O95342 1321 aa16.01■□□□□ 0.15
PHACTR4-203ENST00000463428 DOCK3Q8IZD9 2030 aa16■□□□□ 0.15
PHACTR4-203ENST00000463428 ZNFX1Q9P2E3 1918 aaKnown RBP16■□□□□ 0.15
PHACTR4-203ENST00000463428 SLC25A27O95847 323 aa16■□□□□ 0.15
PHACTR4-203ENST00000463428 HSP90AA1P07900 732 aaKnown RBP16■□□□□ 0.15
PHACTR4-203ENST00000463428 ALAS1P13196 640 aa16■□□□□ 0.15
PHACTR4-203ENST00000463428 PLS1Q14651 629 aa16■□□□□ 0.15
PHACTR4-203ENST00000463428 NPY5RQ15761 445 aa16■□□□□ 0.15
PHACTR4-203ENST00000463428 PPP1R18Q6NYC8 613 aa16■□□□□ 0.15
PHACTR4-203ENST00000463428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16■□□□□ 0.15
PHACTR4-203ENST00000463428 FAM177A1Q8N128 213 aaPredicted RBP16■□□□□ 0.15
PHACTR4-203ENST00000463428 SHCBP1Q8NEM2 672 aa16■□□□□ 0.15
PHACTR4-203ENST00000463428 TRERF1Q96PN7 1200 aa16■□□□□ 0.15
PHACTR4-203ENST00000463428 PHF20Q9BVI0 1012 aa16■□□□□ 0.15
PHACTR4-203ENST00000463428 ZMYND12Q9H0C1 365 aa16■□□□□ 0.15
PHACTR4-203ENST00000463428 PORCNQ9H237 461 aa16■□□□□ 0.15
PHACTR4-203ENST00000463428 MRPL11Q9Y3B7 192 aaKnown RBP16■□□□□ 0.15
PHACTR4-203ENST00000463428 ESYT2A0FGR8 921 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 ADAMTS3O15072 1205 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 ERCC3P19447 782 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 NAPAP54920 295 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 GHRHRQ02643 423 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 MAP2K1Q02750 393 aaPredicted RBP15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 RGS22Q8NE09 1264 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 CHST13Q8NET6 341 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 FBXO18Q8NFZ0 1043 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 TBC1D5Q92609 795 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 IPO9Q96P70 1041 aaKnown RBP15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 EFCC1Q9HA90 598 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 CWC22Q9HCG8 908 aaKnown RBP15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 RNF146Q9NTX7 359 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 WBP1LQ9NX94 342 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 SAGE1Q9NXZ1 904 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 KCNJ14Q9UNX9 436 aa15.99■□□□□ 0.15
PHACTR4-203ENST00000463428 SMCO2A6NFE2 343 aa15.98■□□□□ 0.15
PHACTR4-203ENST00000463428 NFIBO00712 420 aa15.98■□□□□ 0.15
PHACTR4-203ENST00000463428 DDIT3P35638 169 aa15.98■□□□□ 0.15
PHACTR4-203ENST00000463428 LARP1BQ659C4 914 aaKnown RBP15.98■□□□□ 0.15
PHACTR4-203ENST00000463428 KRT40Q6A162 431 aa15.98■□□□□ 0.15
PHACTR4-203ENST00000463428 C8orf76Q96K31 380 aa15.98■□□□□ 0.15
PHACTR4-203ENST00000463428 KIF3AQ9Y496 699 aa15.98■□□□□ 0.15
PHACTR4-203ENST00000463428 MGAMO43451 1857 aa15.98■□□□□ 0.15
PHACTR4-203ENST00000463428 MEIS2O14770 477 aa15.97■□□□□ 0.15
PHACTR4-203ENST00000463428 SYT1P21579 422 aa15.97■□□□□ 0.15
PHACTR4-203ENST00000463428 COPB2P35606 906 aa15.97■□□□□ 0.15
PHACTR4-203ENST00000463428 FOSBP53539 338 aa15.97■□□□□ 0.15
PHACTR4-203ENST00000463428 CCNA1P78396 465 aa15.97■□□□□ 0.15
PHACTR4-203ENST00000463428 NCAPG2Q86XI2 1143 aa15.97■□□□□ 0.15
PHACTR4-203ENST00000463428 JMYQ8N9B5 988 aa15.97■□□□□ 0.15
PHACTR4-203ENST00000463428 CCDC148Q8NFR7 591 aa15.97■□□□□ 0.15
PHACTR4-203ENST00000463428 MAF1Q9H063 256 aa15.97■□□□□ 0.15
PHACTR4-203ENST00000463428 MROH8Q9H579 483 aa15.97■□□□□ 0.15
PHACTR4-203ENST00000463428 ACAD9Q9H845 621 aa15.97■□□□□ 0.15
PHACTR4-203ENST00000463428 RIC8AQ9NPQ8 531 aa15.97■□□□□ 0.15
PHACTR4-203ENST00000463428 HOMER2Q9NSB8 354 aa15.97■□□□□ 0.15
PHACTR4-203ENST00000463428 RBBP6Q7Z6E9 1792 aaKnown RBP15.96■□□□□ 0.15
PHACTR4-203ENST00000463428 M0R2N6 131 aa15.96■□□□□ 0.15
PHACTR4-203ENST00000463428 MMP1P03956 469 aa15.96■□□□□ 0.15
PHACTR4-203ENST00000463428 XBP1P17861 261 aa15.96■□□□□ 0.15
PHACTR4-203ENST00000463428 NLRP5P59047 1200 aa15.96■□□□□ 0.15
PHACTR4-203ENST00000463428 GUCY1B3Q02153 619 aa15.96■□□□□ 0.15
PHACTR4-203ENST00000463428 SAMD3Q8N6K7 520 aa15.96■□□□□ 0.15
PHACTR4-203ENST00000463428 DAGLBQ8NCG7 672 aa15.96■□□□□ 0.15
PHACTR4-203ENST00000463428 CCDC12Q8WUD4 166 aaPredicted RBP15.96■□□□□ 0.15
PHACTR4-203ENST00000463428 PSTPIP2Q9H939 334 aa15.96■□□□□ 0.15
PHACTR4-203ENST00000463428 FBXO40Q9UH90 709 aa15.96■□□□□ 0.15
PHACTR4-203ENST00000463428 LCTP09848 1927 aa15.96■□□□□ 0.15
PHACTR4-203ENST00000463428 PIK3CDO00329 1044 aa15.95■□□□□ 0.14
PHACTR4-203ENST00000463428 PDCP20941 246 aa15.95■□□□□ 0.14
PHACTR4-203ENST00000463428 CTGFP29279 349 aa15.95■□□□□ 0.14
PHACTR4-203ENST00000463428 CLK2P49760 499 aaKnown RBP15.95■□□□□ 0.14
PHACTR4-203ENST00000463428 HSD17B4P51659 736 aa15.95■□□□□ 0.14
PHACTR4-203ENST00000463428 NOM1Q5C9Z4 860 aaKnown RBP15.95■□□□□ 0.14
PHACTR4-203ENST00000463428 GALNT17Q6IS24 598 aa15.95■□□□□ 0.14
PHACTR4-203ENST00000463428 C6orf50Q9HD87 102 aa15.95■□□□□ 0.14
PHACTR4-203ENST00000463428 A1CFQ9NQ94 594 aaKnown RBP15.95■□□□□ 0.14
PHACTR4-203ENST00000463428 PCDHA4Q9UN74 947 aa15.95■□□□□ 0.14
PHACTR4-203ENST00000463428 PLXNB2O15031 1838 aa15.95■□□□□ 0.14
PHACTR4-203ENST00000463428 ZSWIM8A7E2V4 1837 aa15.95■□□□□ 0.14
PHACTR4-203ENST00000463428 GPR25O00155 361 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 CALML3P27482 149 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 GNA11P29992 359 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 MAPK4P31152 587 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 ADCY7P51828 1080 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 MRPL12P52815 198 aaKnown RBP15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 CAP1Q01518 475 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 SP3Q02447 781 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 TRIM29Q14134 588 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 USP17L6PQ6QN14 398 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 GPR142Q7Z601 462 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 MCF2L2Q86YR7 1114 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 TEX2Q8IWB9 1127 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 BLIDQ8IZY5 108 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 OXER1Q8TDS5 423 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 CUL5Q93034 780 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 TNFRSF25Q93038 417 aa15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 MAP3K20Q9NYL2 800 aaKnown RBP15.94■□□□□ 0.14
PHACTR4-203ENST00000463428 CYP39A1Q9NYL5 469 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms