RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 GAS2L1Q99501 681 aaPredicted RBP24.65■■□□□ 1.54
CPSF7-209ENST00000463244 IL23AQ9NPF7 189 aa24.65■■□□□ 1.54
CPSF7-209ENST00000463244 ISY1Q9ULR0 285 aaKnown RBP24.65■■□□□ 1.54
CPSF7-209ENST00000463244 TRANK1O15050 2925 aa24.65■■□□□ 1.54
CPSF7-209ENST00000463244 GBF1Q92538 1859 aa24.64■■□□□ 1.54
CPSF7-209ENST00000463244 PLA2G6O60733 806 aa24.64■■□□□ 1.54
CPSF7-209ENST00000463244 CABYRO75952 493 aa24.64■■□□□ 1.54
CPSF7-209ENST00000463244 SLC3A2P08195 630 aaKnown RBP24.64■■□□□ 1.54
CPSF7-209ENST00000463244 SLC1A4P43007 532 aa24.64■■□□□ 1.54
CPSF7-209ENST00000463244 PPARAQ07869 468 aa24.64■■□□□ 1.54
CPSF7-209ENST00000463244 NOL8Q76FK4 1167 aaKnown RBP24.64■■□□□ 1.54
CPSF7-209ENST00000463244 TLK2Q86UE8 772 aa24.64■■□□□ 1.54
CPSF7-209ENST00000463244 HERVK_113Q902F9 699 aa24.64■■□□□ 1.54
CPSF7-209ENST00000463244 TRERF1Q96PN7 1200 aa24.64■■□□□ 1.54
CPSF7-209ENST00000463244 NAPBQ9H115 298 aa24.64■■□□□ 1.54
CPSF7-209ENST00000463244 LCTP09848 1927 aa24.63■■□□□ 1.53
CPSF7-209ENST00000463244 MCCP23508 829 aa24.63■■□□□ 1.53
CPSF7-209ENST00000463244 IKQ13123 557 aaPredicted RBP24.63■■□□□ 1.53
CPSF7-209ENST00000463244 FSCN1Q16658 493 aaKnown RBP24.63■■□□□ 1.53
CPSF7-209ENST00000463244 PRDM12Q9H4Q4 367 aa24.63■■□□□ 1.53
CPSF7-209ENST00000463244 TTC41PQ6P2S7 1318 aa24.62■■□□□ 1.53
CPSF7-209ENST00000463244 AKNAD1Q5T1N1 836 aa24.62■■□□□ 1.53
CPSF7-209ENST00000463244 HIPK3Q9H422 1215 aa24.62■■□□□ 1.53
CPSF7-209ENST00000463244 CXXC1Q9P0U4 656 aaPredicted RBP24.62■■□□□ 1.53
CPSF7-209ENST00000463244 GRIN2DO15399 1336 aa24.61■■□□□ 1.53
CPSF7-209ENST00000463244 ALAS1P13196 640 aa24.61■■□□□ 1.53
CPSF7-209ENST00000463244 SMPD1P17405 629 aa24.61■■□□□ 1.53
CPSF7-209ENST00000463244 ITGA7Q13683 1181 aa24.61■■□□□ 1.53
CPSF7-209ENST00000463244 RAB30Q15771 203 aa24.61■■□□□ 1.53
CPSF7-209ENST00000463244 PPP4R3BQ5MIZ7 849 aa24.61■■□□□ 1.53
CPSF7-209ENST00000463244 KCTD1Q719H9 257 aa24.61■■□□□ 1.53
CPSF7-209ENST00000463244 PI4K2BQ8TCG2 481 aa24.61■■□□□ 1.53
CPSF7-209ENST00000463244 CHMP4CQ96CF2 233 aa24.61■■□□□ 1.53
CPSF7-209ENST00000463244 SEZ6LQ9BYH1 1024 aa24.61■■□□□ 1.53
CPSF7-209ENST00000463244 MSRAQ9UJ68 235 aa24.61■■□□□ 1.53
CPSF7-209ENST00000463244 DDX49Q9Y6V7 483 aaKnown RBP24.61■■□□□ 1.53
CPSF7-209ENST00000463244 UMODL1Q5DID0 1318 aa24.61■■□□□ 1.53
CPSF7-209ENST00000463244 PTGS1P23219 599 aa24.6■■□□□ 1.53
CPSF7-209ENST00000463244 ZMYM1Q5SVZ6 1142 aa24.6■■□□□ 1.53
CPSF7-209ENST00000463244 AP5M1Q9H0R1 490 aa24.6■■□□□ 1.53
CPSF7-209ENST00000463244 MTIF3Q9H2K0 278 aaKnown RBP24.6■■□□□ 1.53
CPSF7-209ENST00000463244 PDGFCQ9NRA1 345 aa24.6■■□□□ 1.53
CPSF7-209ENST00000463244 CYP39A1Q9NYL5 469 aa24.6■■□□□ 1.53
CPSF7-209ENST00000463244 STX8Q9UNK0 236 aa24.6■■□□□ 1.53
CPSF7-209ENST00000463244 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.6■■□□□ 1.53
CPSF7-209ENST00000463244 ERC2O15083 957 aa24.59■■□□□ 1.53
CPSF7-209ENST00000463244 DYNC1LI2O43237 492 aaPredicted RBP24.59■■□□□ 1.53
CPSF7-209ENST00000463244 ZEB2O60315 1214 aa24.59■■□□□ 1.53
CPSF7-209ENST00000463244 FGBP02675 491 aa24.59■■□□□ 1.53
CPSF7-209ENST00000463244 MUM1L1Q5H9M0 696 aa24.59■■□□□ 1.53
CPSF7-209ENST00000463244 RCSD1Q6JBY9 416 aa24.59■■□□□ 1.53
CPSF7-209ENST00000463244 TAPT1Q6NXT6 567 aa24.59■■□□□ 1.53
CPSF7-209ENST00000463244 FBXO16Q8IX29 292 aaPredicted RBP24.59■■□□□ 1.53
CPSF7-209ENST00000463244 PPM1EQ8WY54 764 aa24.59■■□□□ 1.53
CPSF7-209ENST00000463244 FSD1Q9BTV5 496 aa24.59■■□□□ 1.53
CPSF7-209ENST00000463244 NOC4LQ9BVI4 516 aaKnown RBP24.59■■□□□ 1.53
CPSF7-209ENST00000463244 IL17RBQ9NRM6 502 aa24.59■■□□□ 1.53
CPSF7-209ENST00000463244 PRR12Q9ULL5 1215 aa24.59■■□□□ 1.53
CPSF7-209ENST00000463244 Q9Y3F1 56 aa24.59■■□□□ 1.53
CPSF7-209ENST00000463244 SNAP25P60880 206 aa24.58■■□□□ 1.53
CPSF7-209ENST00000463244 ADGRE1Q14246 886 aa24.58■■□□□ 1.53
CPSF7-209ENST00000463244 IQSEC1Q6DN90 963 aa24.58■■□□□ 1.53
CPSF7-209ENST00000463244 RASGRP2Q7LDG7 609 aa24.58■■□□□ 1.53
CPSF7-209ENST00000463244 ATXN2LQ8WWM7 1075 aaKnown RBP24.58■■□□□ 1.53
CPSF7-209ENST00000463244 TRPV6Q9H1D0 765 aa24.58■■□□□ 1.53
CPSF7-209ENST00000463244 TSPY2A6NKD2 308 aa24.57■■□□□ 1.52
CPSF7-209ENST00000463244 TNFRSF10AO00220 468 aa24.57■■□□□ 1.52
CPSF7-209ENST00000463244 FOXP2O15409 715 aa24.57■■□□□ 1.52
CPSF7-209ENST00000463244 B4GALT4O60513 344 aa24.57■■□□□ 1.52
CPSF7-209ENST00000463244 NMT2O60551 498 aa24.57■■□□□ 1.52
CPSF7-209ENST00000463244 TMEM63BQ5T3F8 832 aa24.57■■□□□ 1.52
CPSF7-209ENST00000463244 EEPD1Q7L9B9 569 aa24.57■■□□□ 1.52
CPSF7-209ENST00000463244 OTOP2Q7RTS6 562 aa24.57■■□□□ 1.52
CPSF7-209ENST00000463244 MORC4Q8TE76 937 aa24.57■■□□□ 1.52
CPSF7-209ENST00000463244 WNT8AQ9H1J5 351 aa24.57■■□□□ 1.52
CPSF7-209ENST00000463244 NKX2-4Q9H2Z4 354 aa24.57■■□□□ 1.52
CPSF7-209ENST00000463244 VTA1Q9NP79 307 aa24.57■■□□□ 1.52
CPSF7-209ENST00000463244 YBX2Q9Y2T7 364 aaKnown RBP24.57■■□□□ 1.52
CPSF7-209ENST00000463244 CCL23P55773 120 aa24.56■■□□□ 1.52
CPSF7-209ENST00000463244 OTUD7AQ8TE49 926 aaPredicted RBP24.56■■□□□ 1.52
CPSF7-209ENST00000463244 INCENPQ9NQS7 918 aa24.56■■□□□ 1.52
CPSF7-209ENST00000463244 THEGQ9P2T0 379 aa24.56■■□□□ 1.52
CPSF7-209ENST00000463244 CCPG1Q9ULG6 757 aa24.56■■□□□ 1.52
CPSF7-209ENST00000463244 ICAM1P05362 532 aa24.55■■□□□ 1.52
CPSF7-209ENST00000463244 PSMC6P62333 389 aa24.55■■□□□ 1.52
CPSF7-209ENST00000463244 CTDSPL2Q05D32 466 aa24.55■■□□□ 1.52
CPSF7-209ENST00000463244 NSMFQ6X4W1 530 aa24.55■■□□□ 1.52
CPSF7-209ENST00000463244 PURBQ96QR8 312 aaKnown RBP24.55■■□□□ 1.52
CPSF7-209ENST00000463244 SLC28A3Q9HAS3 691 aa24.55■■□□□ 1.52
CPSF7-209ENST00000463244 NOVP48745 357 aa24.54■■□□□ 1.52
CPSF7-209ENST00000463244 KIAA1211Q6ZU35 1233 aa24.54■■□□□ 1.52
CPSF7-209ENST00000463244 RANBP17Q9H2T7 1088 aaKnown RBP24.54■■□□□ 1.52
CPSF7-209ENST00000463244 IGFBP4P22692 258 aa24.53■■□□□ 1.52
CPSF7-209ENST00000463244 DUSP28Q4G0W2 176 aa24.53■■□□□ 1.52
CPSF7-209ENST00000463244 RPUSD2Q8IZ73 545 aaKnown RBP24.53■■□□□ 1.52
CPSF7-209ENST00000463244 DCAF4Q8WV16 495 aa24.53■■□□□ 1.52
CPSF7-209ENST00000463244 VWCEQ96DN2 955 aa24.53■■□□□ 1.52
CPSF7-209ENST00000463244 ASB2Q96Q27 587 aa24.53■■□□□ 1.52
CPSF7-209ENST00000463244 ALDH8A1Q9H2A2 487 aaPredicted RBP24.53■■□□□ 1.52
CPSF7-209ENST00000463244 ANAPC4Q9UJX5 808 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms